RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 DYDC1Q8WWB3 177 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 AIFM3Q96NN9 605 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 HAUS7Q99871 368 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 AGXT2Q9BYV1 514 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 PAG1Q9NWQ8 432 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.45□□□□□ -0.58
CHERP-201ENST00000198939 SUGT1Q9Y2Z0 365 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 MYO3BQ8WXR4 1341 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 BMP6P22004 513 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 AFMP43652 599 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 PDCLQ13371 301 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 GRAMD1CQ8IYS0 662 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 SPATA5Q8NB90 893 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 MMS19Q96T76 1030 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 LRRC37AA6NMS7 1700 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 MEFVO15553 781 aaPredicted RBP11.45□□□□□ -0.58
CHERP-201ENST00000198939 ADORA1P30542 326 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 DNA2P51530 1060 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 FKBP1AP62942 108 aaKnown RBP11.45□□□□□ -0.58
CHERP-201ENST00000198939 AOC3Q16853 763 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 ZNF277Q9NRM2 450 aaPredicted RBP11.45□□□□□ -0.58
CHERP-201ENST00000198939 MAST3O60307 1309 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 ECE2O60344 883 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 SHOX2O60902 331 aaPredicted RBP11.44□□□□□ -0.58
CHERP-201ENST00000198939 RXRAP19793 462 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 ERCC5P28715 1186 aaPredicted RBP11.44□□□□□ -0.58
CHERP-201ENST00000198939 METAP2P50579 478 aaKnown RBP eCLIP11.44□□□□□ -0.583e-6■■□□□ 11.5
CHERP-201ENST00000198939 SPATA1Q5VX52 437 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 NCOA7Q8NI08 942 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 BCCIPQ9P287 314 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHERP-201ENST00000198939 SYNRGQ9UMZ2 1314 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 ABL1P00519 1130 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 PHKA1P46020 1223 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 GSTO1P78417 241 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 TRIML1Q8N9V2 468 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 STAG1Q8WVM7 1258 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 JAKMIP2Q96AA8 810 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 VPS16Q9H269 839 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 ZC3H4Q9UPT8 1303 aaKnown RBP11.44□□□□□ -0.58
CHERP-201ENST00000198939 USP17L3A6NCW0 530 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 USP17L4A6NCW7 530 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 FXR1P51114 621 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHERP-201ENST00000198939 ACTN3Q08043 901 aaPredicted RBP11.44□□□□□ -0.58
CHERP-201ENST00000198939 STRIP1Q5VSL9 837 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 USP17L1Q7RTZ2 530 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 IQCA1Q86XH1 822 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 FMNL3Q8IVF7 1028 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 EHBP1Q8NDI1 1231 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 KLC4Q9NSK0 619 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 FAM184BQ9ULE4 1060 aa11.44□□□□□ -0.58
CHERP-201ENST00000198939 EPN1Q9Y6I3 576 aaPredicted RBP11.44□□□□□ -0.58
CHERP-201ENST00000198939 TARSL2A2RTX5 802 aaKnown RBP11.43□□□□□ -0.58
CHERP-201ENST00000198939 LDHCP07864 332 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 MAP3K12Q12852 859 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 DPY19L2Q6NUT2 758 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 CCNI2Q6ZMN8 369 aaPredicted RBP11.43□□□□□ -0.58
CHERP-201ENST00000198939 KRT86O43790 486 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 KCTD16Q68DU8 428 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 MICU3Q86XE3 530 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 PHKBQ93100 1093 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 HAUS4Q9H6D7 363 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 KIAA1551Q9HCM1 1747 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 NFKBIEO00221 500 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 ZFYP08048 801 aaPredicted RBP11.43□□□□□ -0.58
CHERP-201ENST00000198939 DOK7Q18PE1 504 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 CCDC40Q4G0X9 1142 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 AIDAQ96BJ3 306 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 LRP2BPQ9P2M1 347 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 HDAC9Q9UKV0 1011 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 FAM205AQ6ZU69 1335 aa11.43□□□□□ -0.58
CHERP-201ENST00000198939 PPP1R12AO14974 1030 aaPredicted RBP11.42□□□□□ -0.58
CHERP-201ENST00000198939 CIAPIN1Q6FI81 312 aa11.42□□□□□ -0.58
CHERP-201ENST00000198939 CCDC121Q6ZUS5 278 aa11.42□□□□□ -0.58
CHERP-201ENST00000198939 AMOTL1Q8IY63 956 aa11.42□□□□□ -0.58
CHERP-201ENST00000198939 ZKSCAN4Q969J2 545 aaPredicted RBP11.42□□□□□ -0.58
CHERP-201ENST00000198939 MIEF2Q96C03 454 aa11.42□□□□□ -0.58
CHERP-201ENST00000198939 SPEF2Q9C093 1822 aa11.42□□□□□ -0.58
CHERP-201ENST00000198939 ZNF213O14771 459 aa11.42□□□□□ -0.58
CHERP-201ENST00000198939 KIF4AO95239 1232 aa11.42□□□□□ -0.58
CHERP-201ENST00000198939 ATP1A1P05023 1023 aaKnown RBP11.42□□□□□ -0.58
CHERP-201ENST00000198939 RPSAP08865 295 aaKnown RBP11.42□□□□□ -0.58
CHERP-201ENST00000198939 IDEP14735 1019 aa11.42□□□□□ -0.58
CHERP-201ENST00000198939 IFT88Q13099 833 aa11.42□□□□□ -0.58
CHERP-201ENST00000198939 MORC3Q14149 939 aa11.42□□□□□ -0.58
CHERP-201ENST00000198939 ABHD10Q9NUJ1 306 aa11.42□□□□□ -0.58
CHERP-201ENST00000198939 TRIM10Q9UDY6 481 aa11.42□□□□□ -0.58
CHERP-201ENST00000198939 RNF113AO15541 343 aaKnown RBP11.42□□□□□ -0.58
CHERP-201ENST00000198939 RPS12P25398 132 aaKnown RBP11.42□□□□□ -0.58
CHERP-201ENST00000198939 ARFGEF1Q9Y6D6 1849 aa11.42□□□□□ -0.58
CHERP-201ENST00000198939 SNAP23O00161 211 aa11.41□□□□□ -0.58
CHERP-201ENST00000198939 GYPCP04921 128 aa11.41□□□□□ -0.58
CHERP-201ENST00000198939 PTPAQ15257 358 aa11.41□□□□□ -0.58
CHERP-201ENST00000198939 AP1ARQ63HQ0 302 aa11.41□□□□□ -0.58
CHERP-201ENST00000198939 TRAPPC11Q7Z392 1133 aa11.41□□□□□ -0.58
CHERP-201ENST00000198939 DBNDD1Q9H9R9 158 aa11.41□□□□□ -0.58
CHERP-201ENST00000198939 A1CFQ9NQ94 594 aaKnown RBP11.41□□□□□ -0.58
CHERP-201ENST00000198939 RBM28Q9NW13 759 aaKnown RBP11.41□□□□□ -0.58
CHERP-201ENST00000198939 ZNHIT6Q9NWK9 470 aaKnown RBP11.41□□□□□ -0.58
CHERP-201ENST00000198939 ADD3Q9UEY8 706 aaKnown RBP11.41□□□□□ -0.58
CHERP-201ENST00000198939 NDUFA10O95299 355 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms