RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 CCDC171Q6TFL3 1326 aa18.74■□□□□ 0.59
ERCC1-201ENST00000013807 PQBP1O60828 265 aaKnown RBP18.73■□□□□ 0.59
ERCC1-201ENST00000013807 C6orf222P0C671 652 aaPredicted RBP18.73■□□□□ 0.59
ERCC1-201ENST00000013807 SNHG28P0DPA3 235 aa18.73■□□□□ 0.59
ERCC1-201ENST00000013807 ALAS1P13196 640 aa18.73■□□□□ 0.59
ERCC1-201ENST00000013807 RAG1P15918 1043 aa18.73■□□□□ 0.59
ERCC1-201ENST00000013807 MFAP1P55081 439 aaKnown RBP18.73■□□□□ 0.59
ERCC1-201ENST00000013807 MUM1L1Q5H9M0 696 aa18.73■□□□□ 0.59
ERCC1-201ENST00000013807 GNASQ5JWF2 1037 aa18.73■□□□□ 0.59
ERCC1-201ENST00000013807 AKNAD1Q5T1N1 836 aa18.73■□□□□ 0.59
ERCC1-201ENST00000013807 PLEKHM2Q8IWE5 1019 aa18.73■□□□□ 0.59
ERCC1-201ENST00000013807 TMEM39AQ9NV64 488 aa18.73■□□□□ 0.59
ERCC1-201ENST00000013807 PNMA2Q9UL42 364 aa18.73■□□□□ 0.59
ERCC1-201ENST00000013807 MYH6P13533 1939 aa18.72■□□□□ 0.59
ERCC1-201ENST00000013807 TIMP1P01033 207 aa18.72■□□□□ 0.59
ERCC1-201ENST00000013807 SDSP20132 328 aa18.72■□□□□ 0.59
ERCC1-201ENST00000013807 IRX5P78411 483 aaPredicted RBP18.72■□□□□ 0.59
ERCC1-201ENST00000013807 NUCB1Q02818 461 aa18.72■□□□□ 0.59
ERCC1-201ENST00000013807 TNFAIP2Q03169 654 aa18.72■□□□□ 0.59
ERCC1-201ENST00000013807 IQSEC1Q6DN90 963 aa18.72■□□□□ 0.59
ERCC1-201ENST00000013807 RASGRP2Q7LDG7 609 aa18.72■□□□□ 0.59
ERCC1-201ENST00000013807 CHD1LQ86WJ1 897 aa18.72■□□□□ 0.59
ERCC1-201ENST00000013807 SLC43A3Q8NBI5 491 aa18.72■□□□□ 0.59
ERCC1-201ENST00000013807 GUCD1Q96NT3 240 aa18.72■□□□□ 0.59
ERCC1-201ENST00000013807 SEZ6LQ9BYH1 1024 aa18.72■□□□□ 0.59
ERCC1-201ENST00000013807 CDH23Q9H251 3354 aa18.72■□□□□ 0.59
ERCC1-201ENST00000013807 MYO9BQ13459 2157 aa18.71■□□□□ 0.59
ERCC1-201ENST00000013807 A0A0U1RQG5 324 aaPredicted RBP18.71■□□□□ 0.59
ERCC1-201ENST00000013807 ARVCFO00192 962 aa18.71■□□□□ 0.59
ERCC1-201ENST00000013807 IGHDP01880 384 aa18.71■□□□□ 0.59
ERCC1-201ENST00000013807 PDHBP11177 359 aa18.71■□□□□ 0.59
ERCC1-201ENST00000013807 EPHB4P54760 987 aa18.71■□□□□ 0.59
ERCC1-201ENST00000013807 TTBK2Q6IQ55 1244 aa18.71■□□□□ 0.59
ERCC1-201ENST00000013807 TAPT1Q6NXT6 567 aa18.71■□□□□ 0.59
ERCC1-201ENST00000013807 MFSD6Q6ZSS7 791 aa18.71■□□□□ 0.59
ERCC1-201ENST00000013807 CCPG1Q9ULG6 757 aa18.71■□□□□ 0.59
ERCC1-201ENST00000013807 ISY1Q9ULR0 285 aaKnown RBP18.71■□□□□ 0.59
ERCC1-201ENST00000013807 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-201ENST00000013807 TRIM6-TRIM34B2RNG4 842 aa18.7■□□□□ 0.58
ERCC1-201ENST00000013807 CABYRO75952 493 aa18.7■□□□□ 0.58
ERCC1-201ENST00000013807 FPGSQ05932 587 aa18.7■□□□□ 0.58
ERCC1-201ENST00000013807 ZNF697Q5TEC3 545 aa18.7■□□□□ 0.58
ERCC1-201ENST00000013807 SYDE2Q5VT97 1194 aa18.7■□□□□ 0.58
ERCC1-201ENST00000013807 MFSD5Q6N075 450 aa18.7■□□□□ 0.58
ERCC1-201ENST00000013807 CCDC174Q6PII3 467 aa18.7■□□□□ 0.58
ERCC1-201ENST00000013807 DGKHQ86XP1 1220 aa18.7■□□□□ 0.58
ERCC1-201ENST00000013807 FAM126BQ8IXS8 530 aa18.7■□□□□ 0.58
ERCC1-201ENST00000013807 RNF41Q9H4P4 317 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-201ENST00000013807 VTA1Q9NP79 307 aa18.7■□□□□ 0.58
ERCC1-201ENST00000013807 TMEM265A0A087WTH1 108 aa18.69■□□□□ 0.58
ERCC1-201ENST00000013807 CD4P01730 458 aa18.69■□□□□ 0.58
ERCC1-201ENST00000013807 SNAP25P60880 206 aa18.69■□□□□ 0.58
ERCC1-201ENST00000013807 ZNF543Q08ER8 600 aa18.69■□□□□ 0.58
ERCC1-201ENST00000013807 CCDC96Q2M329 555 aa18.69■□□□□ 0.58
ERCC1-201ENST00000013807 RRP12Q5JTH9 1297 aaKnown RBP18.69■□□□□ 0.58
ERCC1-201ENST00000013807 RILPL2Q969X0 211 aa18.69■□□□□ 0.58
ERCC1-201ENST00000013807 MAF1Q9H063 256 aa18.69■□□□□ 0.58
ERCC1-201ENST00000013807 SEMA6BQ9H3T3 888 aa18.69■□□□□ 0.58
ERCC1-201ENST00000013807 TOMM22Q9NS69 142 aa18.69■□□□□ 0.58
ERCC1-201ENST00000013807 SMPD1P17405 629 aa18.68■□□□□ 0.58
ERCC1-201ENST00000013807 SLC16A2P36021 539 aa18.68■□□□□ 0.58
ERCC1-201ENST00000013807 BAATQ14032 418 aaPredicted RBP18.68■□□□□ 0.58
ERCC1-201ENST00000013807 ANKS1AQ92625 1134 aa18.68■□□□□ 0.58
ERCC1-201ENST00000013807 ESR2Q92731 530 aa18.68■□□□□ 0.58
ERCC1-201ENST00000013807 CHMP4CQ96CF2 233 aa18.68■□□□□ 0.58
ERCC1-201ENST00000013807 ADD3Q9UEY8 706 aaKnown RBP18.68■□□□□ 0.58
ERCC1-201ENST00000013807 WDR19Q8NEZ3 1342 aa18.68■□□□□ 0.58
ERCC1-201ENST00000013807 EYSQ5T1H1 3165 aa18.68■□□□□ 0.58
ERCC1-201ENST00000013807 RBM47A0AV96 593 aaKnown RBP18.67■□□□□ 0.58
ERCC1-201ENST00000013807 HIP1O00291 1037 aa18.67■□□□□ 0.58
ERCC1-201ENST00000013807 HAND2P61296 217 aa18.67■□□□□ 0.58
ERCC1-201ENST00000013807 FSCN1Q16658 493 aaKnown RBP18.67■□□□□ 0.58
ERCC1-201ENST00000013807 GPATCH4Q5T3I0 446 aaKnown RBP18.67■□□□□ 0.58
ERCC1-201ENST00000013807 B4GALNT3Q6L9W6 998 aa18.67■□□□□ 0.58
ERCC1-201ENST00000013807 NSMFQ6X4W1 530 aa18.67■□□□□ 0.58
ERCC1-201ENST00000013807 TLK2Q86UE8 772 aa18.67■□□□□ 0.58
ERCC1-201ENST00000013807 TBC1D10CQ8IV04 446 aa18.67■□□□□ 0.58
ERCC1-201ENST00000013807 CLEC4DQ8WXI8 215 aa18.67■□□□□ 0.58
ERCC1-201ENST00000013807 PDGFCQ9NRA1 345 aa18.67■□□□□ 0.58
ERCC1-201ENST00000013807 SCN10AQ9Y5Y9 1956 aa18.67■□□□□ 0.58
ERCC1-201ENST00000013807 KIAA1217Q5T5P2 1943 aa18.66■□□□□ 0.58
ERCC1-201ENST00000013807 PRUNE2Q8WUY3 3088 aa18.66■□□□□ 0.58
ERCC1-201ENST00000013807 NFIBO00712 420 aa18.66■□□□□ 0.58
ERCC1-201ENST00000013807 ZNF213O14771 459 aa18.66■□□□□ 0.58
ERCC1-201ENST00000013807 ALDH5A1P51649 535 aaPredicted RBP18.66■□□□□ 0.58
ERCC1-201ENST00000013807 BEX3Q00994 111 aa18.66■□□□□ 0.58
ERCC1-201ENST00000013807 DUSP28Q4G0W2 176 aa18.66■□□□□ 0.58
ERCC1-201ENST00000013807 CCDC178Q5BJE1 867 aa18.66■□□□□ 0.58
ERCC1-201ENST00000013807 RASIP1Q5U651 963 aa18.66■□□□□ 0.58
ERCC1-201ENST00000013807 RGS22Q8NE09 1264 aa18.66■□□□□ 0.58
ERCC1-201ENST00000013807 RNPC3Q96LT9 517 aaKnown RBP18.66■□□□□ 0.58
ERCC1-201ENST00000013807 DSCC1Q9BVC3 393 aa18.66■□□□□ 0.58
ERCC1-201ENST00000013807 AP5M1Q9H0R1 490 aa18.66■□□□□ 0.58
ERCC1-201ENST00000013807 TTYH1Q9H313 450 aaPredicted RBP18.66■□□□□ 0.58
ERCC1-201ENST00000013807 GPCPD1Q9NPB8 672 aa18.66■□□□□ 0.58
ERCC1-201ENST00000013807 GRIN2DO15399 1336 aa18.66■□□□□ 0.58
ERCC1-201ENST00000013807 FRMPD2Q68DX3 1309 aaPredicted RBP18.66■□□□□ 0.58
ERCC1-201ENST00000013807 DLL1O00548 723 aa18.65■□□□□ 0.58
ERCC1-201ENST00000013807 TLR3O15455 904 aaKnown RBP18.65■□□□□ 0.58
ERCC1-201ENST00000013807 DYNC1LI2O43237 492 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms