RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 SYCP1Q15431 976 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 CDC42EP5Q6NZY7 148 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 HHIPL2Q6UWX4 724 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 SWAP70Q9UH65 585 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 SERPINB13Q9UIV8 391 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 RWDD2AQ9UIY3 292 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 PARP3Q9Y6F1 533 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 SCN9AQ15858 1988 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 CCNT1O60563 726 aaKnown RBP19.28■□□□□ 0.68
PHGDH-211ENST00000641213 SNHG28P0DPA3 235 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 EIF6P56537 245 aaKnown RBP19.28■□□□□ 0.68
PHGDH-211ENST00000641213 LETM2Q2VYF4 491 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 ASPRV1Q53RT3 343 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 CLEC10AQ8IUN9 316 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 CTAGE1Q96RT6 745 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 BAG1Q99933 345 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-211ENST00000641213 MYO3BQ8WXR4 1341 aa19.28■□□□□ 0.68
PHGDH-211ENST00000641213 G3V3G9 751 aa19.27■□□□□ 0.68
PHGDH-211ENST00000641213 hCG_1984214I3L0E3 225 aa19.27■□□□□ 0.68
PHGDH-211ENST00000641213 COBLO75128 1261 aa19.27■□□□□ 0.68
PHGDH-211ENST00000641213 OR52Z1P0C646 297 aa19.27■□□□□ 0.68
PHGDH-211ENST00000641213 DCAF8Q5TAQ9 597 aa19.27■□□□□ 0.68
PHGDH-211ENST00000641213 APOBEC3HQ6NTF7 200 aaKnown RBP19.27■□□□□ 0.68
PHGDH-211ENST00000641213 NEK8Q86SG6 692 aa19.27■□□□□ 0.68
PHGDH-211ENST00000641213 ZNF713Q8N859 430 aaPredicted RBP19.27■□□□□ 0.68
PHGDH-211ENST00000641213 RASSF8Q8NHQ8 419 aa19.27■□□□□ 0.68
PHGDH-211ENST00000641213 TEKT1Q969V4 418 aa19.27■□□□□ 0.68
PHGDH-211ENST00000641213 BIN2Q9UBW5 565 aaPredicted RBP19.27■□□□□ 0.68
PHGDH-211ENST00000641213 C10orf71Q711Q0 1435 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 STX10O60499 249 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 TTLL1O95922 423 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 APBA3O96018 575 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 TUBB4AP04350 444 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 SHMT1P34896 483 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 PBX1P40424 430 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 NCBP1Q09161 790 aaKnown RBP19.26■□□□□ 0.67
PHGDH-211ENST00000641213 PAK1Q13153 545 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 SYT10Q6XYQ8 523 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 REXO1L1PQ8IX06 675 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 REXO1Q8N1G1 1221 aaKnown RBP19.26■□□□□ 0.67
PHGDH-211ENST00000641213 TMX4Q9H1E5 349 aaPredicted RBP19.26■□□□□ 0.67
PHGDH-211ENST00000641213 GDAQ9Y2T3 454 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 SLX4Q8IY92 1834 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 JAKMIP3Q5VZ66 844 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 FLAD1Q8NFF5 587 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 TBCKQ8TEA7 893 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 LRRC15Q8TF66 581 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 NELFBQ8WX92 580 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 AK8Q96MA6 479 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 PLIN2Q99541 437 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 KBTBD4Q9NVX7 518 aa19.26■□□□□ 0.67
PHGDH-211ENST00000641213 PRCPP42785 496 aa19.25■□□□□ 0.67
PHGDH-211ENST00000641213 GPCPD1Q9NPB8 672 aa19.25■□□□□ 0.67
PHGDH-211ENST00000641213 KCNQ5Q9NR82 932 aa19.25■□□□□ 0.67
PHGDH-211ENST00000641213 TMEM260Q9NX78 707 aa19.25■□□□□ 0.67
PHGDH-211ENST00000641213 MYH7BA7E2Y1 1941 aa19.25■□□□□ 0.67
PHGDH-211ENST00000641213 MYL1P05976 194 aa19.24■□□□□ 0.67
PHGDH-211ENST00000641213 FILIP1LQ4L180 1135 aa19.24■□□□□ 0.67
PHGDH-211ENST00000641213 CABP7Q86V35 215 aa19.24■□□□□ 0.67
PHGDH-211ENST00000641213 ZNF622Q969S3 477 aaKnown RBP eCLIP19.24■□□□□ 0.672e-6■■■□□ 15.2
PHGDH-211ENST00000641213 COA7Q96BR5 231 aa19.24■□□□□ 0.67
PHGDH-211ENST00000641213 DBNDD1Q9H9R9 158 aa19.24■□□□□ 0.67
PHGDH-211ENST00000641213 LIMA1Q9UHB6 759 aaKnown RBP19.24■□□□□ 0.67
PHGDH-211ENST00000641213 ZSCAN12O43309 604 aa19.24■□□□□ 0.67
PHGDH-211ENST00000641213 KLRC4O43908 158 aa19.24■□□□□ 0.67
PHGDH-211ENST00000641213 CRKP46108 304 aa19.24■□□□□ 0.67
PHGDH-211ENST00000641213 NFIAQ12857 509 aa19.24■□□□□ 0.67
PHGDH-211ENST00000641213 KCNB1Q14721 858 aa19.24■□□□□ 0.67
PHGDH-211ENST00000641213 NAA30Q147X3 362 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-211ENST00000641213 PPP2R2CQ9Y2T4 447 aa19.24■□□□□ 0.67
PHGDH-211ENST00000641213 LRRC10BA6NIK2 292 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 AKR1B15C9JRZ8 316 aaPredicted RBP19.23■□□□□ 0.67
PHGDH-211ENST00000641213 HLA-DOAP06340 250 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 ETF1P62495 437 aaKnown RBP19.23■□□□□ 0.67
PHGDH-211ENST00000641213 ZNF543Q08ER8 600 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 ORC2Q13416 577 aaPredicted RBP19.23■□□□□ 0.67
PHGDH-211ENST00000641213 KRT31Q15323 416 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 KMT5BQ4FZB7 885 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 MSL1Q68DK7 614 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 TRIM65Q6PJ69 517 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 PODNQ7Z5L7 613 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 IGSF22Q8N9C0 903 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 CUEDC2Q9H467 287 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 ZNF215Q9UL58 517 aaPredicted RBP19.23■□□□□ 0.67
PHGDH-211ENST00000641213 MAPK8IP1Q9UQF2 711 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 PLCG1P19174 1290 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 ADCY7P51828 1080 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 RBL2Q08999 1139 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 ADSSL1Q8N142 457 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 PANX2Q96RD6 677 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 JMJD4Q9H9V9 463 aa19.23■□□□□ 0.67
PHGDH-211ENST00000641213 TECP42680 631 aa19.22■□□□□ 0.67
PHGDH-211ENST00000641213 PPFIBP1Q86W92 1011 aa19.22■□□□□ 0.67
PHGDH-211ENST00000641213 POTEDQ86YR6 584 aa19.22■□□□□ 0.67
PHGDH-211ENST00000641213 ZFPM1Q8IX07 1006 aa19.22■□□□□ 0.67
PHGDH-211ENST00000641213 ADGRF4Q8IZF3 695 aa19.22■□□□□ 0.67
PHGDH-211ENST00000641213 ZDHHC15Q96MV8 337 aa19.22■□□□□ 0.67
PHGDH-211ENST00000641213 L2HGDHQ9H9P8 463 aa19.22■□□□□ 0.67
PHGDH-211ENST00000641213 MAGEF1Q9HAY2 307 aa19.22■□□□□ 0.67
PHGDH-211ENST00000641213 ARFGEF1Q9Y6D6 1849 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms