RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 ARMT1Q9H993 441 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 PAIP2BQ9ULR5 123 aaKnown RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 NFE2L3Q9Y4A8 694 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 USH1CQ9Y6N9 552 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 MED23Q9ULK4 1368 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 UTYO14607 1347 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 AK9Q5TCS8 1911 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 RASSF10A6NK89 507 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 GOLGA8KD6RF30 607 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 PDE8BO95263 885 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 GGCXP38435 758 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 NDUFA8P51970 172 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 DYNC1I2Q13409 638 aaKnown RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 TAF11Q15544 211 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 EPHA10Q5JZY3 1008 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 USPL1Q5W0Q7 1092 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 SPECC1LQ69YQ0 1117 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 FCHSD1Q86WN1 690 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 CCDC63Q8NA47 563 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 PHKBQ93100 1093 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 NAPGQ99747 312 aaPredicted RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 HINFPQ9BQA5 517 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 FUCA2Q9BTY2 467 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 EXOC1Q9NV70 894 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 CTDP1Q9Y5B0 961 aaPredicted RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 WDR17Q8IZU2 1322 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 WDR19Q8NEZ3 1342 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 RPAP1Q9BWH6 1393 aaPredicted RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 JCADQ9P266 1359 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 BICDL2A1A5D9 508 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 ZMYND10O75800 440 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 ADD1P35611 737 aaKnown RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 SH2D4BQ5SQS7 431 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 MFN1Q8IWA4 741 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 IFNL3Q8IZI9 196 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 FBF1Q8TES7 1133 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 ZMAT2Q96NC0 199 aaKnown RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 GBP5Q96PP8 586 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 ALS2CR12Q96Q35 445 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 SETDB2Q96T68 719 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 IQSEC3Q9UPP2 1182 aaPredicted RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 PARP3Q9Y6F1 533 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 hCG_2014768A0A024R1R8 64 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 EIF3HO15372 352 aaKnown RBP eCLIP6.27□□□□□ -1.4
SCARB2-218ENST00000639715 TSPY3P0CV98 308 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 TSPY8P0CW00 308 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 PCP11498 1178 aaKnown RBP6.27□□□□□ -1.4
SCARB2-218ENST00000639715 TRIM21P19474 475 aaKnown RBP6.27□□□□□ -1.4
SCARB2-218ENST00000639715 VSNL1P62760 191 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 ATP11AP98196 1134 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 GOLGA8FQ08AF8 430 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 GOLGA8DPQ0D2H9 430 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 GRIK3Q13003 919 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 PRPF4BQ13523 1007 aaKnown RBP6.27□□□□□ -1.4
SCARB2-218ENST00000639715 CYB5D1Q6P9G0 228 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 DTHD1Q6ZMT9 781 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 CACNA2D3Q8IZS8 1091 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 DRAXINQ8NBI3 349 aaPredicted RBP6.27□□□□□ -1.4
SCARB2-218ENST00000639715 CLIC6Q96NY7 704 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 PUS3Q9BZE2 481 aaKnown RBP6.27□□□□□ -1.4
SCARB2-218ENST00000639715 MMADHCQ9H3L0 296 aaPredicted RBP6.27□□□□□ -1.4
SCARB2-218ENST00000639715 ZHX3Q9H4I2 956 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 HAUS2Q9NVX0 235 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 L1RE1Q9UN81 338 aa6.27□□□□□ -1.4
SCARB2-218ENST00000639715 TTF2Q9UNY4 1162 aaKnown RBP6.27□□□□□ -1.4
SCARB2-218ENST00000639715 ABCC12Q96J65 1359 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 KRT86O43790 486 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 PLCG2P16885 1265 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 MAGEA8P43361 318 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 PLCD1P51178 756 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 SESN3P58005 492 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 MAP3K9P80192 1104 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC93Q567U6 631 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 TCERG1LQ5VWI1 586 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 VPS36Q86VN1 386 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 TMTC1Q8IUR5 882 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 OSBP2Q969R2 916 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC51Q96ER9 411 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 DTNBP1Q96EV8 351 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 WDR24Q96S15 920 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 VCX3BQ9H321 246 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 C6orf50Q9HD87 102 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 VCX3AQ9NNX9 186 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 JADE2Q9NQC1 790 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 DDX20Q9UHI6 824 aaKnown RBP6.27□□□□□ -1.41
SCARB2-218ENST00000639715 STX8Q9UNK0 236 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 TRPC6Q9Y210 931 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 LUC7L2Q9Y383 392 aaKnown RBP6.27□□□□□ -1.41
SCARB2-218ENST00000639715 TMEM94Q12767 1356 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 DIAPH2O60879 1101 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 GNA11P29992 359 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 CDC25CP30307 473 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 KIF23Q02241 960 aaPredicted RBP6.27□□□□□ -1.41
SCARB2-218ENST00000639715 TMEM132AQ24JP5 1023 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC96Q2M329 555 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 ZNF772Q68DY9 489 aaPredicted RBP6.27□□□□□ -1.41
SCARB2-218ENST00000639715 APOA5Q6Q788 366 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 TPTE2Q6XPS3 522 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 ZKSCAN3Q9BRR0 538 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms