RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 LRRC10BA6NIK2 292 aa13.5□□□□□ -0.25
TP53-227ENST00000622645 ONECUT3O60422 494 aaPredicted RBP13.5□□□□□ -0.25
TP53-227ENST00000622645 CCNT1O60563 726 aaKnown RBP13.5□□□□□ -0.25
TP53-227ENST00000622645 GYPCP04921 128 aa13.5□□□□□ -0.25
TP53-227ENST00000622645 GAKO14976 1311 aa13.5□□□□□ -0.25
TP53-227ENST00000622645 A0A0U1RQJ8 604 aa13.5□□□□□ -0.25
TP53-227ENST00000622645 MFAP3LO75121 409 aa13.5□□□□□ -0.25
TP53-227ENST00000622645 HOXA10P31260 410 aaPredicted RBP13.5□□□□□ -0.25
TP53-227ENST00000622645 PMS1P54277 932 aaKnown RBP13.5□□□□□ -0.25
TP53-227ENST00000622645 EIF6P56537 245 aaKnown RBP13.5□□□□□ -0.25
TP53-227ENST00000622645 ATRIPQ8WXE1 791 aa13.5□□□□□ -0.25
TP53-227ENST00000622645 RRP36Q96EU6 259 aaKnown RBP13.5□□□□□ -0.25
TP53-227ENST00000622645 FEZ1Q99689 392 aa13.5□□□□□ -0.25
TP53-227ENST00000622645 LIMA1Q9UHB6 759 aaKnown RBP13.5□□□□□ -0.25
TP53-227ENST00000622645 FRMPD2Q68DX3 1309 aaPredicted RBP13.5□□□□□ -0.25
TP53-227ENST00000622645 KCNJ18B7U540 433 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 RNF225M0QZC1 329 aaPredicted RBP13.49□□□□□ -0.25
TP53-227ENST00000622645 POLRMTO00411 1230 aaKnown RBP13.49□□□□□ -0.25
TP53-227ENST00000622645 KCNJ12Q14500 433 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 TXNRD1Q16881 649 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 TCP11X2Q5H9J9 407 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 CLEC10AQ8IUN9 316 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 TBC1D22AQ8WUA7 517 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 CCSER1Q9C0I3 900 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 SEC63Q9UGP8 760 aaKnown RBP13.49□□□□□ -0.25
TP53-227ENST00000622645 DDX60LQ5H9U9 1706 aaKnown RBP13.49□□□□□ -0.25
TP53-227ENST00000622645 GOLGA6L9A6NEM1 432 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 COPB1P53618 953 aaKnown RBP13.49□□□□□ -0.25
TP53-227ENST00000622645 NONOQ15233 471 aaKnown RBP eCLIP13.49□□□□□ -0.25
TP53-227ENST00000622645 JAKMIP3Q5VZ66 844 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 SLF2Q8IX21 1173 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 ADSSL1Q8N142 457 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 MXD3Q9BW11 206 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 CARD6Q9BX69 1037 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 C6orf50Q9HD87 102 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 LZTFL1Q9NQ48 299 aa13.49□□□□□ -0.25
TP53-227ENST00000622645 BIN2Q9UBW5 565 aaPredicted RBP13.49□□□□□ -0.25
TP53-227ENST00000622645 KLRC4O43908 158 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 CCDC175P0C221 793 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 GNA11P29992 359 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 CASQ1P31415 396 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 KRT25Q7Z3Z0 450 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 IRF2BP1Q8IU81 584 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 LRRC47Q8N1G4 583 aaKnown RBP13.48□□□□□ -0.25
TP53-227ENST00000622645 TBCKQ8TEA7 893 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 CCDC12Q8WUD4 166 aaPredicted RBP13.48□□□□□ -0.25
TP53-227ENST00000622645 CRAMP1Q96RY5 1269 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 KBTBD4Q9NVX7 518 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 TMEM260Q9NX78 707 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 DDX41Q9UJV9 622 aaKnown RBP13.48□□□□□ -0.25
TP53-227ENST00000622645 PRDM4Q9UKN5 801 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 ADGRG1Q9Y653 693 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 LAD1O00515 517 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 TRIM37O94972 964 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 OR52Z1P0C646 297 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 PDHBP11177 359 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 PLCG1P19174 1290 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 PRPHP41219 470 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 TECP42680 631 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 ARHGAP29Q52LW3 1261 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 SOGA3Q5TF21 947 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 EEF2KMTQ96G04 330 aa13.48□□□□□ -0.25
TP53-227ENST00000622645 AKR1B1P15121 316 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 ZSCAN20P17040 1043 aaPredicted RBP13.47□□□□□ -0.25
TP53-227ENST00000622645 SPAG1Q07617 926 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 NEK8Q86SG6 692 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 CABP7Q86V35 215 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 CNGA4Q8IV77 575 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 CERS5Q8N5B7 392 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 MNS1Q8NEH6 495 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 KIFC2Q96AC6 838 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 DDX4Q9NQI0 724 aaKnown RBP13.47□□□□□ -0.25
TP53-227ENST00000622645 OGFRQ9NZT2 677 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 ITIH6Q6UXX5 1313 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 CDK5RAP2Q96SN8 1893 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 PPEF1O14829 653 aaPredicted RBP13.47□□□□□ -0.25
TP53-227ENST00000622645 NOVP48745 357 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 ANKRD20A12PQ8NF67 263 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 UBXN4Q92575 508 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 COA7Q96BR5 231 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 NAA15Q9BXJ9 866 aaKnown RBP13.47□□□□□ -0.25
TP53-227ENST00000622645 MTMR4Q9NYA4 1195 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 GOLGB1Q14789 3259 aaKnown RBP13.47□□□□□ -0.25
TP53-227ENST00000622645 H7C1D1 291 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 UBXN1Q04323 297 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 KCNB1Q14721 858 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 REXO1Q8N1G1 1221 aaKnown RBP13.47□□□□□ -0.25
TP53-227ENST00000622645 NUP88Q99567 741 aaPredicted RBP13.47□□□□□ -0.25
TP53-227ENST00000622645 ZNF446Q9NWS9 450 aa13.47□□□□□ -0.25
TP53-227ENST00000622645 TRPC5Q9UL62 973 aaPredicted RBP13.47□□□□□ -0.25
TP53-227ENST00000622645 UBR3Q6ZT12 1888 aa13.46□□□□□ -0.25
TP53-227ENST00000622645 KLRG2A4D1S0 409 aaPredicted RBP13.46□□□□□ -0.25
TP53-227ENST00000622645 RHOBTB3O94955 611 aa13.46□□□□□ -0.25
TP53-227ENST00000622645 SLURP2P0DP57 97 aa13.46□□□□□ -0.25
TP53-227ENST00000622645 H2AFXP16104 143 aaPredicted RBP13.46□□□□□ -0.25
TP53-227ENST00000622645 SCNN1DP51172 638 aa13.46□□□□□ -0.25
TP53-227ENST00000622645 MAP3K9P80192 1104 aa13.46□□□□□ -0.25
TP53-227ENST00000622645 GABPAQ06546 454 aa13.46□□□□□ -0.25
TP53-227ENST00000622645 DOK7Q18PE1 504 aa13.46□□□□□ -0.25
TP53-227ENST00000622645 DPP8Q6V1X1 898 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms