RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 NCAPGQ9BPX3 1015 aa13.11□□□□□ -0.31
CDH5-208ENST00000614547 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.11□□□□□ -0.31
CDH5-208ENST00000614547 DMGDHQ9UI17 866 aaKnown RBP13.11□□□□□ -0.31
CDH5-208ENST00000614547 KIF13AQ9H1H9 1805 aa13.11□□□□□ -0.31
CDH5-208ENST00000614547 EHHADHQ08426 723 aa13.1□□□□□ -0.31
CDH5-208ENST00000614547 INF2Q27J81 1249 aa13.1□□□□□ -0.31
CDH5-208ENST00000614547 MSANTD4Q8NCY6 345 aa13.1□□□□□ -0.31
CDH5-208ENST00000614547 IGDCC4Q8TDY8 1250 aa13.1□□□□□ -0.31
CDH5-208ENST00000614547 FERMT2Q96AC1 680 aa13.1□□□□□ -0.31
CDH5-208ENST00000614547 ARL8AQ96BM9 186 aa13.1□□□□□ -0.31
CDH5-208ENST00000614547 HEXIM1O94992 359 aaKnown RBP13.1□□□□□ -0.31
CDH5-208ENST00000614547 CLNS1AP54105 237 aaKnown RBP13.1□□□□□ -0.31
CDH5-208ENST00000614547 MB21D1Q8N884 522 aa13.1□□□□□ -0.31
CDH5-208ENST00000614547 HNRNPLLQ8WVV9 542 aaKnown RBP13.1□□□□□ -0.31
CDH5-208ENST00000614547 DYDC1Q8WWB3 177 aa13.1□□□□□ -0.31
CDH5-208ENST00000614547 LUC7LQ9NQ29 371 aaKnown RBP13.1□□□□□ -0.31
CDH5-208ENST00000614547 BMP15O95972 392 aa13.1□□□□□ -0.31
CDH5-208ENST00000614547 IL2RBP14784 551 aa13.1□□□□□ -0.31
CDH5-208ENST00000614547 HNRNPH1P31943 449 aaKnown RBP13.1□□□□□ -0.31
CDH5-208ENST00000614547 KIRREL3Q8IZU9 778 aa13.1□□□□□ -0.31
CDH5-208ENST00000614547 CNOT6LQ96LI5 555 aaKnown RBP13.1□□□□□ -0.31
CDH5-208ENST00000614547 KANSL2Q9H9L4 492 aa13.1□□□□□ -0.31
CDH5-208ENST00000614547 FAM184BQ9ULE4 1060 aa13.1□□□□□ -0.31
CDH5-208ENST00000614547 EIF4E1BA6NMX2 242 aaKnown RBP13.09□□□□□ -0.31
CDH5-208ENST00000614547 GTPBP6O43824 516 aaPredicted RBP13.09□□□□□ -0.31
CDH5-208ENST00000614547 CEP104O60308 925 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 NMT2O60551 498 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 PLEKP08567 350 aaPredicted RBP13.09□□□□□ -0.31
CDH5-208ENST00000614547 EARS2Q5JPH6 523 aaKnown RBP13.09□□□□□ -0.31
CDH5-208ENST00000614547 NAA35Q5VZE5 725 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 CD248Q9HCU0 757 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 SMIM22K7EJ46 135 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 EIF4A3P38919 411 aaKnown RBP13.09□□□□□ -0.31
CDH5-208ENST00000614547 DPYDQ12882 1025 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 PALLDQ8WX93 1383 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 PLEKHG2Q9H7P9 1386 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 GPR108Q9NPR9 543 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 UTYO14607 1347 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 NEBLO76041 1014 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 TXKP42681 527 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 SF3B2Q13435 895 aaKnown RBP13.09□□□□□ -0.31
CDH5-208ENST00000614547 LRRC41Q15345 812 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.09□□□□□ -0.31
CDH5-208ENST00000614547 IFT20Q8IY31 132 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 TACO1Q9BSH4 297 aaKnown RBP13.09□□□□□ -0.31
CDH5-208ENST00000614547 SLC24A3Q9HC58 644 aa13.09□□□□□ -0.31
CDH5-208ENST00000614547 USP17L12C9JPN9 530 aa13.08□□□□□ -0.31
CDH5-208ENST00000614547 USP17L21D6R901 530 aa13.08□□□□□ -0.31
CDH5-208ENST00000614547 H7C1D1 291 aa13.08□□□□□ -0.31
CDH5-208ENST00000614547 DYNLL1P63167 89 aaKnown RBP13.08□□□□□ -0.31
CDH5-208ENST00000614547 MSL1Q68DK7 614 aa13.08□□□□□ -0.31
CDH5-208ENST00000614547 CCNI2Q6ZMN8 369 aaPredicted RBP13.08□□□□□ -0.31
CDH5-208ENST00000614547 NELFCDQ8IXH7 590 aa13.08□□□□□ -0.31
CDH5-208ENST00000614547 MYO1AQ9UBC5 1043 aa13.08□□□□□ -0.31
CDH5-208ENST00000614547 PPP1R3GB7ZBB8 358 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 CCDC172P0C7W6 258 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 GOLGA8HP0CJ92 632 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 DNM2P50570 870 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 FAM114A1Q8IWE2 563 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 ANKARQ7Z5J8 1434 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 GOLGA8KD6RF30 607 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 EZRP15311 586 aaKnown RBP13.08□□□□□ -0.32
CDH5-208ENST00000614547 DZIP3Q86Y13 1208 aaKnown RBP13.08□□□□□ -0.32
CDH5-208ENST00000614547 TRIM58Q8NG06 486 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 N4BP2L2Q92802 583 aaPredicted RBP13.08□□□□□ -0.32
CDH5-208ENST00000614547 SPAG5Q96R06 1193 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 MED15Q96RN5 788 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 NBPF3Q9H094 633 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 DPH5Q9H2P9 285 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 CPVLQ9H3G5 476 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 CXorf56Q9H5V9 222 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 RAB21Q9UL25 225 aa13.08□□□□□ -0.32
CDH5-208ENST00000614547 TRAF5O00463 557 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 AATFQ9NY61 560 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDH5-208ENST00000614547 RWDD2AQ9UIY3 292 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 HYOU1Q9Y4L1 999 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 ANKRD26Q9UPS8 1709 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 ZSCAN5CA6NGD5 496 aaPredicted RBP13.07□□□□□ -0.32
CDH5-208ENST00000614547 SYF2O95926 243 aaKnown RBP13.07□□□□□ -0.32
CDH5-208ENST00000614547 PEX19P40855 299 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 GYG1P46976 350 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 RASGRF1Q13972 1273 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 AMOTL1Q8IY63 956 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 TTLL11Q8NHH1 800 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 CALML4Q96GE6 196 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 NOX5Q96PH1 765 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 KCNK3O14649 394 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 PDE8BO95263 885 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 UBE3CQ15386 1083 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 KRT71Q3SY84 523 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 CFAP221Q4G0U5 840 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 ZNF658Q5TYW1 1059 aaPredicted RBP13.07□□□□□ -0.32
CDH5-208ENST00000614547 TRMT1LQ7Z2T5 733 aaKnown RBP13.07□□□□□ -0.32
CDH5-208ENST00000614547 OR2W6PQ8NHA6 318 aa13.07□□□□□ -0.32
CDH5-208ENST00000614547 PDE2AO00408 941 aaPredicted RBP13.06□□□□□ -0.32
CDH5-208ENST00000614547 TECP42680 631 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 NAPAP54920 295 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 PAK2Q13177 524 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 PPP2R5AQ15172 486 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms