RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 POLR3EQ9NVU0 708 aa25.54■■□□□ 1.68
UBE3C-209ENST00000611269 TMOD4Q9NZQ9 345 aa25.54■■□□□ 1.68
UBE3C-209ENST00000611269 KCNH4Q9UQ05 1017 aa25.54■■□□□ 1.68
UBE3C-209ENST00000611269 PRPF3O43395 683 aaKnown RBP25.53■■□□□ 1.68
UBE3C-209ENST00000611269 SMARCA1P28370 1054 aa25.53■■□□□ 1.68
UBE3C-209ENST00000611269 FSTL1Q12841 308 aa25.53■■□□□ 1.68
UBE3C-209ENST00000611269 IKQ13123 557 aaPredicted RBP25.53■■□□□ 1.68
UBE3C-209ENST00000611269 SAPCD2Q86UD0 394 aa25.53■■□□□ 1.68
UBE3C-209ENST00000611269 RIOX1Q9H6W3 641 aa25.53■■□□□ 1.68
UBE3C-209ENST00000611269 CXCL11O14625 94 aa25.53■■□□□ 1.68
UBE3C-209ENST00000611269 STAT2P52630 851 aa25.53■■□□□ 1.68
UBE3C-209ENST00000611269 AKAP17AQ02040 695 aaKnown RBP25.53■■□□□ 1.68
UBE3C-209ENST00000611269 ADGRF4Q8IZF3 695 aa25.53■■□□□ 1.68
UBE3C-209ENST00000611269 WNK4Q96J92 1243 aa25.53■■□□□ 1.68
UBE3C-209ENST00000611269 A0A0G2JLL6 359 aaPredicted RBP25.52■■□□□ 1.68
UBE3C-209ENST00000611269 KIF28PB7ZC32 967 aa25.52■■□□□ 1.68
UBE3C-209ENST00000611269 YEATS4O95619 227 aa25.52■■□□□ 1.68
UBE3C-209ENST00000611269 TRIM29Q14134 588 aa25.52■■□□□ 1.68
UBE3C-209ENST00000611269 UVSSAQ2YD98 709 aa25.52■■□□□ 1.68
UBE3C-209ENST00000611269 PRRT2Q7Z6L0 340 aaPredicted RBP25.52■■□□□ 1.68
UBE3C-209ENST00000611269 CLSTN2Q9H4D0 955 aa25.52■■□□□ 1.68
UBE3C-209ENST00000611269 RPAP3Q9H6T3 665 aaPredicted RBP25.52■■□□□ 1.68
UBE3C-209ENST00000611269 LOC285556D6RIA3 1793 aa25.52■■□□□ 1.68
UBE3C-209ENST00000611269 DEXIO95424 95 aa25.51■■□□□ 1.67
UBE3C-209ENST00000611269 BTNL9Q6UXG8 535 aa25.51■■□□□ 1.67
UBE3C-209ENST00000611269 RBM43Q6ZSC3 357 aaKnown RBP25.51■■□□□ 1.67
UBE3C-209ENST00000611269 LINC00301Q8NCQ3 95 aa25.51■■□□□ 1.67
UBE3C-209ENST00000611269 TANGO6Q9C0B7 1094 aa25.51■■□□□ 1.67
UBE3C-209ENST00000611269 JMJD4Q9H9V9 463 aa25.51■■□□□ 1.67
UBE3C-209ENST00000611269 U2AF2P26368 475 aaKnown RBP eCLIP25.51■■□□□ 1.67
UBE3C-209ENST00000611269 PKN1Q16512 942 aa25.51■■□□□ 1.67
UBE3C-209ENST00000611269 HOMER1Q86YM7 354 aa25.51■■□□□ 1.67
UBE3C-209ENST00000611269 FBXO28Q9NVF7 368 aa25.51■■□□□ 1.67
UBE3C-209ENST00000611269 NR1I2O75469 434 aa25.5■■□□□ 1.67
UBE3C-209ENST00000611269 MKRN3Q13064 507 aaKnown RBP25.5■■□□□ 1.67
UBE3C-209ENST00000611269 SYDE2Q5VT97 1194 aa25.5■■□□□ 1.67
UBE3C-209ENST00000611269 RNF214Q8ND24 703 aa25.5■■□□□ 1.67
UBE3C-209ENST00000611269 RRP36Q96EU6 259 aaKnown RBP25.5■■□□□ 1.67
UBE3C-209ENST00000611269 PIGSQ96S52 555 aa25.5■■□□□ 1.67
UBE3C-209ENST00000611269 TNMDQ9H2S6 317 aa25.5■■□□□ 1.67
UBE3C-209ENST00000611269 FEM1BQ9UK73 627 aa25.5■■□□□ 1.67
UBE3C-209ENST00000611269 TMEM88BA6NKF7 163 aa25.49■■□□□ 1.67
UBE3C-209ENST00000611269 GADL1Q6ZQY3 521 aa25.49■■□□□ 1.67
UBE3C-209ENST00000611269 CCAR1Q8IX12 1150 aaKnown RBP25.49■■□□□ 1.67
UBE3C-209ENST00000611269 KCNG4Q8TDN1 519 aa25.49■■□□□ 1.67
UBE3C-209ENST00000611269 CHURC1Q8WUH1 139 aa25.49■■□□□ 1.67
UBE3C-209ENST00000611269 PDLIM2Q96JY6 352 aa25.49■■□□□ 1.67
UBE3C-209ENST00000611269 TLL2Q9Y6L7 1015 aa25.49■■□□□ 1.67
UBE3C-209ENST00000611269 PARP14Q460N5 1801 aa25.49■■□□□ 1.67
UBE3C-209ENST00000611269 PLA2G6O60733 806 aa25.49■■□□□ 1.67
UBE3C-209ENST00000611269 SNAPC2Q13487 334 aa25.49■■□□□ 1.67
UBE3C-209ENST00000611269 ADALQ6DHV7 355 aa25.49■■□□□ 1.67
UBE3C-209ENST00000611269 SAMD1Q6SPF0 538 aaPredicted RBP25.49■■□□□ 1.67
UBE3C-209ENST00000611269 KIFC2Q96AC6 838 aa25.49■■□□□ 1.67
UBE3C-209ENST00000611269 PRR12Q9ULL5 1215 aa25.49■■□□□ 1.67
UBE3C-209ENST00000611269 CLIC4Q9Y696 253 aa25.49■■□□□ 1.67
UBE3C-209ENST00000611269 A0A1W2PQ27 194 aa25.48■■□□□ 1.67
UBE3C-209ENST00000611269 A0A1W2PQ64 194 aa25.48■■□□□ 1.67
UBE3C-209ENST00000611269 A0A1W2PQD8 194 aa25.48■■□□□ 1.67
UBE3C-209ENST00000611269 CCDC192P0DO97 292 aa25.48■■□□□ 1.67
UBE3C-209ENST00000611269 ZNF157P51786 506 aaPredicted RBP25.48■■□□□ 1.67
UBE3C-209ENST00000611269 TREML2Q5T2D2 321 aa25.48■■□□□ 1.67
UBE3C-209ENST00000611269 SPRYD7Q5W111 196 aa25.48■■□□□ 1.67
UBE3C-209ENST00000611269 FAM160B2Q86V87 743 aa25.48■■□□□ 1.67
UBE3C-209ENST00000611269 SEC63Q9UGP8 760 aaKnown RBP25.48■■□□□ 1.67
UBE3C-209ENST00000611269 ABT1Q9ULW3 272 aaKnown RBP25.48■■□□□ 1.67
UBE3C-209ENST00000611269 FLOT1O75955 427 aa25.47■■□□□ 1.67
UBE3C-209ENST00000611269 ME1P48163 572 aa25.47■■□□□ 1.67
UBE3C-209ENST00000611269 STK38Q15208 465 aa25.47■■□□□ 1.67
UBE3C-209ENST00000611269 PFKFB3Q16875 520 aaPredicted RBP25.47■■□□□ 1.67
UBE3C-209ENST00000611269 ANO1Q5XXA6 986 aa25.47■■□□□ 1.67
UBE3C-209ENST00000611269 PROCA1Q8NCQ7 364 aaPredicted RBP25.47■■□□□ 1.67
UBE3C-209ENST00000611269 MTMR8Q96EF0 704 aa25.47■■□□□ 1.67
UBE3C-209ENST00000611269 PCDHA7Q9UN72 937 aa25.47■■□□□ 1.67
UBE3C-209ENST00000611269 ZBTB48P10074 688 aaPredicted RBP25.47■■□□□ 1.67
UBE3C-209ENST00000611269 SCG2P13521 617 aa25.47■■□□□ 1.67
UBE3C-209ENST00000611269 SNAP25P60880 206 aa25.47■■□□□ 1.67
UBE3C-209ENST00000611269 MOGSQ13724 837 aa25.47■■□□□ 1.67
UBE3C-209ENST00000611269 RGMBQ6NW40 437 aa25.47■■□□□ 1.67
UBE3C-209ENST00000611269 SLF1Q9BQI6 1058 aa25.47■■□□□ 1.67
UBE3C-209ENST00000611269 CAMK4Q16566 473 aa25.46■■□□□ 1.67
UBE3C-209ENST00000611269 RASAL3Q86YV0 1011 aa25.46■■□□□ 1.67
UBE3C-209ENST00000611269 FAM43AQ8N2R8 423 aa25.46■■□□□ 1.67
UBE3C-209ENST00000611269 ENGASEQ8NFI3 743 aa25.46■■□□□ 1.67
UBE3C-209ENST00000611269 RLFQ13129 1914 aa25.46■■□□□ 1.67
UBE3C-209ENST00000611269 ZBTB5O15062 677 aa25.45■■□□□ 1.67
UBE3C-209ENST00000611269 SPTLC2O15270 562 aa25.45■■□□□ 1.67
UBE3C-209ENST00000611269 MMP1P03956 469 aa25.45■■□□□ 1.67
UBE3C-209ENST00000611269 CDC37Q16543 378 aaPredicted RBP25.45■■□□□ 1.67
UBE3C-209ENST00000611269 CATSPERGQ6ZRH7 1159 aa25.45■■□□□ 1.67
UBE3C-209ENST00000611269 PRPF38AQ8NAV1 312 aaKnown RBP25.45■■□□□ 1.67
UBE3C-209ENST00000611269 GPKOWQ92917 476 aaPredicted RBP eCLIP25.45■■□□□ 1.678e-6■■■□□ 18.6
UBE3C-209ENST00000611269 MS4A4AQ96JQ5 239 aa25.45■■□□□ 1.67
UBE3C-209ENST00000611269 USP17L15C9J2P7 530 aa25.45■■□□□ 1.66
UBE3C-209ENST00000611269 USP17L13C9JLJ4 530 aa25.45■■□□□ 1.66
UBE3C-209ENST00000611269 USP17L11C9JVI0 530 aa25.45■■□□□ 1.66
UBE3C-209ENST00000611269 USP17L18D6R9N7 530 aa25.45■■□□□ 1.66
UBE3C-209ENST00000611269 USP17L22D6RA61 530 aa25.45■■□□□ 1.66
UBE3C-209ENST00000611269 USP17L17D6RBQ6 530 aa25.45■■□□□ 1.66
UBE3C-209ENST00000611269 USP17L19D6RCP7 530 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms