RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 KCNJ14Q9UNX9 436 aa26.51■■□□□ 1.83
IRF3-227ENST00000600911 PNMA6FA0A0J9YX94 578 aa26.5■■□□□ 1.83
IRF3-227ENST00000600911 STXBP3O00186 592 aa26.5■■□□□ 1.83
IRF3-227ENST00000600911 AKAP17AQ02040 695 aaKnown RBP26.5■■□□□ 1.83
IRF3-227ENST00000600911 LARP1BQ659C4 914 aaKnown RBP26.5■■□□□ 1.83
IRF3-227ENST00000600911 FASTKD5Q7L8L6 764 aaKnown RBP26.5■■□□□ 1.83
IRF3-227ENST00000600911 HEATR3Q7Z4Q2 680 aa26.5■■□□□ 1.83
IRF3-227ENST00000600911 TESPA1A2RU30 521 aaPredicted RBP26.5■■□□□ 1.83
IRF3-227ENST00000600911 IGF2BP3O00425 579 aaKnown RBP eCLIP26.5■■□□□ 1.83
IRF3-227ENST00000600911 COG2Q14746 738 aa26.5■■□□□ 1.83
IRF3-227ENST00000600911 PAXIP1Q6ZW49 1069 aaPredicted RBP26.5■■□□□ 1.83
IRF3-227ENST00000600911 SLC38A10Q9HBR0 1119 aa26.5■■□□□ 1.83
IRF3-227ENST00000600911 MTMR6Q9Y217 621 aa26.5■■□□□ 1.83
IRF3-227ENST00000600911 RASSF10A6NK89 507 aa26.49■■□□□ 1.83
IRF3-227ENST00000600911 VWA5AO00534 786 aa26.49■■□□□ 1.83
IRF3-227ENST00000600911 CYP2C8P10632 490 aa26.49■■□□□ 1.83
IRF3-227ENST00000600911 NPY5RQ15761 445 aa26.49■■□□□ 1.83
IRF3-227ENST00000600911 FOXD4L5Q5VV16 416 aaPredicted RBP26.49■■□□□ 1.83
IRF3-227ENST00000600911 FOXD4L4Q8WXT5 416 aaPredicted RBP26.49■■□□□ 1.83
IRF3-227ENST00000600911 AOC2O75106 756 aa26.48■■□□□ 1.83
IRF3-227ENST00000600911 KRT40Q6A162 431 aa26.48■■□□□ 1.83
IRF3-227ENST00000600911 C8orf76Q96K31 380 aa26.48■■□□□ 1.83
IRF3-227ENST00000600911 AGBL1Q96MI9 1066 aa26.48■■□□□ 1.83
IRF3-227ENST00000600911 RAVER2Q9HCJ3 691 aaKnown RBP26.48■■□□□ 1.83
IRF3-227ENST00000600911 SEC63Q9UGP8 760 aaKnown RBP26.48■■□□□ 1.83
IRF3-227ENST00000600911 PDHXO00330 501 aa26.47■■□□□ 1.83
IRF3-227ENST00000600911 USH1GQ495M9 461 aa26.47■■□□□ 1.83
IRF3-227ENST00000600911 BARHL2Q9NY43 387 aa26.47■■□□□ 1.83
IRF3-227ENST00000600911 STX6O43752 255 aa26.47■■□□□ 1.83
IRF3-227ENST00000600911 CNMDO75829 334 aa26.47■■□□□ 1.83
IRF3-227ENST00000600911 DEFB115Q30KQ5 88 aa26.47■■□□□ 1.83
IRF3-227ENST00000600911 FBXO18Q8NFZ0 1043 aa26.47■■□□□ 1.83
IRF3-227ENST00000600911 BTBD7Q9P203 1132 aa26.47■■□□□ 1.83
IRF3-227ENST00000600911 VPS37CA5D8V6 355 aaPredicted RBP26.46■■□□□ 1.83
IRF3-227ENST00000600911 TMEM132BQ14DG7 1078 aa26.46■■□□□ 1.83
IRF3-227ENST00000600911 ANKRD23Q86SG2 305 aa26.46■■□□□ 1.83
IRF3-227ENST00000600911 CPXCR1Q8N123 301 aa26.46■■□□□ 1.83
IRF3-227ENST00000600911 CCDC102AQ96A19 550 aa26.46■■□□□ 1.83
IRF3-227ENST00000600911 PHF20Q9BVI0 1012 aa26.46■■□□□ 1.83
IRF3-227ENST00000600911 R3HDMLQ9H3Y0 253 aa26.46■■□□□ 1.83
IRF3-227ENST00000600911 TXNRD2Q9NNW7 524 aa26.46■■□□□ 1.83
IRF3-227ENST00000600911 RBM27Q9P2N5 1060 aaKnown RBP26.46■■□□□ 1.83
IRF3-227ENST00000600911 KIF28PB7ZC32 967 aa26.45■■□□□ 1.82
IRF3-227ENST00000600911 OPLAHO14841 1288 aa26.45■■□□□ 1.82
IRF3-227ENST00000600911 HERVK_113P62684 666 aa26.45■■□□□ 1.82
IRF3-227ENST00000600911 IRX3P78415 501 aaPredicted RBP26.45■■□□□ 1.82
IRF3-227ENST00000600911 FBXO11Q86XK2 927 aa26.45■■□□□ 1.82
IRF3-227ENST00000600911 OXER1Q8TDS5 423 aa26.45■■□□□ 1.82
IRF3-227ENST00000600911 WASF1Q92558 559 aa26.45■■□□□ 1.82
IRF3-227ENST00000600911 CAPNS2Q96L46 248 aa26.45■■□□□ 1.82
IRF3-227ENST00000600911 ZNF214Q9UL59 606 aaPredicted RBP26.45■■□□□ 1.82
IRF3-227ENST00000600911 RIPK3Q9Y572 518 aa26.45■■□□□ 1.82
IRF3-227ENST00000600911 MANSC4A6NHS7 340 aaPredicted RBP26.44■■□□□ 1.82
IRF3-227ENST00000600911 KIF23Q02241 960 aaPredicted RBP26.44■■□□□ 1.82
IRF3-227ENST00000600911 MYPNQ86TC9 1320 aa26.44■■□□□ 1.82
IRF3-227ENST00000600911 MYH15Q9Y2K3 1946 aa26.44■■□□□ 1.82
IRF3-227ENST00000600911 BRD1O95696 1058 aa26.43■■□□□ 1.82
IRF3-227ENST00000600911 NOM1Q5C9Z4 860 aaKnown RBP26.43■■□□□ 1.82
IRF3-227ENST00000600911 LBX2Q6XYB7 198 aa26.43■■□□□ 1.82
IRF3-227ENST00000600911 FERMT3Q86UX7 667 aa26.43■■□□□ 1.82
IRF3-227ENST00000600911 CHAMP1Q96JM3 812 aa26.43■■□□□ 1.82
IRF3-227ENST00000600911 HOXC10Q9NYD6 342 aa26.43■■□□□ 1.82
IRF3-227ENST00000600911 PCDHA1Q9Y5I3 950 aa26.43■■□□□ 1.82
IRF3-227ENST00000600911 MMP1P03956 469 aa26.43■■□□□ 1.82
IRF3-227ENST00000600911 ICAM1P05362 532 aa26.43■■□□□ 1.82
IRF3-227ENST00000600911 NAPAP54920 295 aa26.43■■□□□ 1.82
IRF3-227ENST00000600911 AMNQ9BXJ7 453 aa26.43■■□□□ 1.82
IRF3-227ENST00000600911 RBPJLQ9UBG7 517 aa26.43■■□□□ 1.82
IRF3-227ENST00000600911 RBBP6Q7Z6E9 1792 aaKnown RBP26.42■■□□□ 1.82
IRF3-227ENST00000600911 PCNTO95613 3336 aa26.41■■□□□ 1.82
IRF3-227ENST00000600911 ZBED4O75132 1171 aa26.41■■□□□ 1.82
IRF3-227ENST00000600911 OSBPP22059 807 aa26.41■■□□□ 1.82
IRF3-227ENST00000600911 IFNL1Q8IU54 200 aa26.41■■□□□ 1.82
IRF3-227ENST00000600911 RASGRP4Q8TDF6 673 aa26.41■■□□□ 1.82
IRF3-227ENST00000600911 TBC1D5Q92609 795 aa26.41■■□□□ 1.82
IRF3-227ENST00000600911 PAGR1Q9BTK6 254 aa26.41■■□□□ 1.82
IRF3-227ENST00000600911 CCPG1Q9ULG6 757 aa26.41■■□□□ 1.82
IRF3-227ENST00000600911 SLC45A1Q9Y2W3 748 aa26.41■■□□□ 1.82
IRF3-227ENST00000600911 KIF3AQ9Y496 699 aa26.41■■□□□ 1.82
IRF3-227ENST00000600911 H3BQV1 296 aa26.4■■□□□ 1.82
IRF3-227ENST00000600911 PDCP20941 246 aa26.4■■□□□ 1.82
IRF3-227ENST00000600911 NR5A1Q13285 461 aa26.4■■□□□ 1.82
IRF3-227ENST00000600911 Q3C1V9 767 aa26.4■■□□□ 1.82
IRF3-227ENST00000600911 MUM1L1Q5H9M0 696 aa26.4■■□□□ 1.82
IRF3-227ENST00000600911 EARS2Q5JPH6 523 aaKnown RBP26.4■■□□□ 1.82
IRF3-227ENST00000600911 IFFO2Q5TF58 517 aa26.4■■□□□ 1.82
IRF3-227ENST00000600911 SH3GLB2Q9NR46 395 aa26.4■■□□□ 1.82
IRF3-227ENST00000600911 BTBD18B2RXH4 712 aa26.39■■□□□ 1.82
IRF3-227ENST00000600911 ZSCAN22P10073 491 aaPredicted RBP26.39■■□□□ 1.82
IRF3-227ENST00000600911 VEGFBP49765 207 aa26.39■■□□□ 1.82
IRF3-227ENST00000600911 RESTQ13127 1097 aa26.39■■□□□ 1.82
IRF3-227ENST00000600911 PABPC4Q13310 644 aaKnown RBP eCLIP26.39■■□□□ 1.826e-8■■■■□ 22.6
IRF3-227ENST00000600911 ZMYND12Q9H0C1 365 aa26.39■■□□□ 1.82
IRF3-227ENST00000600911 CHMP5Q9NZZ3 219 aa26.39■■□□□ 1.82
IRF3-227ENST00000600911 LCTP09848 1927 aa26.39■■□□□ 1.82
IRF3-227ENST00000600911 FAM205CA6NFA0 338 aa26.39■■□□□ 1.81
IRF3-227ENST00000600911 SMCO2A6NFE2 343 aa26.39■■□□□ 1.81
IRF3-227ENST00000600911 NLRP5P59047 1200 aa26.39■■□□□ 1.81
IRF3-227ENST00000600911 SNRNP48Q6IEG0 339 aaKnown RBP26.39■■□□□ 1.81
IRF3-227ENST00000600911 FAM173BQ6P4H8 233 aa26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms