RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 FMR1Q06787 632 aaKnown RBP eCLIP10.88□□□□□ -0.67
NFKB1-212ENST00000600343 CCDC122Q5T0U0 273 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 LZICQ8WZA0 190 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 TEKT1Q969V4 418 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 BRD8Q9H0E9 1235 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 POLR3DP05423 398 aaPredicted RBP10.88□□□□□ -0.67
NFKB1-212ENST00000600343 ZFXP17010 805 aaPredicted RBP10.88□□□□□ -0.67
NFKB1-212ENST00000600343 ATP6V1C1P21283 382 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 GSTT1P30711 240 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 FXR1P51114 621 aaKnown RBP eCLIP10.88□□□□□ -0.67
NFKB1-212ENST00000600343 C1orf131Q8NDD1 294 aaKnown RBP10.88□□□□□ -0.67
NFKB1-212ENST00000600343 SMC1BQ8NDV3 1235 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 SPIRE2Q8WWL2 714 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 CWC25Q9NXE8 425 aaPredicted RBP10.88□□□□□ -0.67
NFKB1-212ENST00000600343 ASXL2Q76L83 1435 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.87□□□□□ -0.67
NFKB1-212ENST00000600343 IFIT3O14879 490 aaKnown RBP10.87□□□□□ -0.67
NFKB1-212ENST00000600343 SF3A3Q12874 501 aaKnown RBP eCLIP10.87□□□□□ -0.675e-6■■■■■ 29.5
NFKB1-212ENST00000600343 BTG3Q14201 252 aaPredicted RBP10.87□□□□□ -0.67
NFKB1-212ENST00000600343 CCDC129Q6ZRS4 1044 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 CACNA2D4Q7Z3S7 1137 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 DACH1Q9UI36 760 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 BARX2Q9UMQ3 279 aaPredicted RBP10.87□□□□□ -0.67
NFKB1-212ENST00000600343 PCDHA5Q9Y5H7 936 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 PNPLA6Q8IY17 1366 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 MROH7-TTC4A0A0A0MT08 1334 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 CCDC166P0CW27 439 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 IDEP14735 1019 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 NLRP5P59047 1200 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 PI16Q6UXB8 463 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 SESTD1Q86VW0 696 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 ZCRB1Q8TBF4 217 aaKnown RBP10.87□□□□□ -0.67
NFKB1-212ENST00000600343 ENOX1Q8TC92 643 aaKnown RBP10.87□□□□□ -0.67
NFKB1-212ENST00000600343 KCNN1Q92952 543 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 POLR3EQ9NVU0 708 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 SLC12A6Q9UHW9 1150 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 SCOCQ9UIL1 159 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 LRRC42Q9Y546 428 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 CPSF1Q10570 1443 aaKnown RBP10.87□□□□□ -0.67
NFKB1-212ENST00000600343 GCOM1H8Y6P7 765 aaPredicted RBP10.87□□□□□ -0.67
NFKB1-212ENST00000600343 IGF2BP3O00425 579 aaKnown RBP eCLIP10.87□□□□□ -0.67
NFKB1-212ENST00000600343 MYZAPP0CAP1 466 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 DRD4P21917 467 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 KIAA0753Q2KHM9 967 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 LINS1Q8NG48 757 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 HELLSQ9NRZ9 838 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 ADAM22Q9P0K1 906 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 ABCF2Q9UG63 623 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 ABCA9Q8IUA7 1624 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 IPO5O00410 1097 aaKnown RBP10.87□□□□□ -0.67
NFKB1-212ENST00000600343 SUPT3HO75486 399 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 GYPCP04921 128 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 GUCY2FP51841 1108 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 C16orf87Q6PH81 154 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 NCCRP1Q6ZVX7 275 aaPredicted RBP10.87□□□□□ -0.67
NFKB1-212ENST00000600343 SAPCD2Q86UD0 394 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 TMBIM4Q9HC24 238 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 PCDH18Q9HCL0 1135 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 EMILIN1Q9Y6C2 1016 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 SBNO1A3KN83 1393 aa10.87□□□□□ -0.67
NFKB1-212ENST00000600343 SMAPO00193 183 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 HNRNPCP07910 306 aaKnown RBP eCLIP10.86□□□□□ -0.67
NFKB1-212ENST00000600343 GBP1P32455 592 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 FAM227BQ96M60 508 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 PPP1R12CQ9BZL4 782 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 ABHD10Q9NUJ1 306 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 AGAP1Q9UPQ3 857 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 PLAAQ9Y263 795 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 MYO3AQ8NEV4 1616 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 ADGRF5Q8IZF2 1346 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 VWDEQ8N2E2 1590 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 GSTA2P09210 222 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 BMP6P22004 513 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 FECHP22830 423 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 MARCKSP29966 332 aaPredicted RBP10.86□□□□□ -0.67
NFKB1-212ENST00000600343 TSNAXIP1Q2TAA8 658 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 SH2D4BQ5SQS7 431 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 OR52E8Q6IFG1 317 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 C8orf74Q6P047 294 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 CTNNBL1Q8WYA6 563 aaPredicted RBP10.86□□□□□ -0.67
NFKB1-212ENST00000600343 NUP88Q99567 741 aaPredicted RBP10.86□□□□□ -0.67
NFKB1-212ENST00000600343 TRAIPQ9BWF2 469 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 CARD9Q9H257 536 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 LNPEPQ9UIQ6 1025 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 NFU1Q9UMS0 254 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 EPN1Q9Y6I3 576 aaPredicted RBP10.86□□□□□ -0.67
NFKB1-212ENST00000600343 ORC4O43929 436 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 NDUFA10O95299 355 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 FAM153BP0C7A2 387 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 YY1P25490 414 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 TNFRSF8P28908 595 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 PPARAQ07869 468 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 FAM153CQ494X1 144 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 TCERG1LQ5VWI1 586 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 RUFY4Q6ZNE9 571 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 G2E3Q7L622 706 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 IFT81Q8WYA0 676 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 CHMP6Q96FZ7 201 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 GBP5Q96PP8 586 aa10.86□□□□□ -0.67
NFKB1-212ENST00000600343 HMG20BQ9P0W2 317 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms