RNA–Protein interactions for RNA: ENST00000591338.1

LINC00662-208, long intergenic non-protein coding RNA 662, human

TSL 2

Gene LINC00662, Length 436 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00662-208	ENST00000591338	PFKFB3	Q16875	520 aa	Predicted RBP	13.77	□□□□□ -0.21
LINC00662-208	ENST00000591338	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.77	□□□□□ -0.21
LINC00662-208	ENST00000591338	OTUD7B	Q6GQQ9	843 aa		13.77	□□□□□ -0.21
LINC00662-208	ENST00000591338	RGS22	Q8NE09	1264 aa		13.77	□□□□□ -0.21
LINC00662-208	ENST00000591338	FBXO18	Q8NFZ0	1043 aa		13.77	□□□□□ -0.21
LINC00662-208	ENST00000591338	CHURC1	Q8WUH1	139 aa		13.77	□□□□□ -0.21
LINC00662-208	ENST00000591338	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.77	□□□□□ -0.21
LINC00662-208	ENST00000591338	SLC10A4	Q96EP9	437 aa		13.77	□□□□□ -0.21
LINC00662-208	ENST00000591338	RRP36	Q96EU6	259 aa	Known RBP	13.77	□□□□□ -0.21
LINC00662-208	ENST00000591338	PIGS	Q96S52	555 aa		13.77	□□□□□ -0.21
LINC00662-208	ENST00000591338	JMJD4	Q9H9V9	463 aa		13.77	□□□□□ -0.21
LINC00662-208	ENST00000591338	WDR46	O15213	610 aa	Known RBP	13.76	□□□□□ -0.21
LINC00662-208	ENST00000591338	SH3D19	Q5HYK7	790 aa		13.76	□□□□□ -0.21
LINC00662-208	ENST00000591338	SYDE2	Q5VT97	1194 aa		13.76	□□□□□ -0.21
LINC00662-208	ENST00000591338	KRT40	Q6A162	431 aa		13.76	□□□□□ -0.21
LINC00662-208	ENST00000591338	TMEM92	Q6UXU6	159 aa		13.76	□□□□□ -0.21
LINC00662-208	ENST00000591338	RBM46	Q8TBY0	533 aa	Known RBP	13.76	□□□□□ -0.21
LINC00662-208	ENST00000591338	MTMR8	Q96EF0	704 aa		13.76	□□□□□ -0.21
LINC00662-208	ENST00000591338	C12orf42	Q96LP6	360 aa		13.76	□□□□□ -0.21
LINC00662-208	ENST00000591338	FEM1B	Q9UK73	627 aa		13.76	□□□□□ -0.21
LINC00662-208	ENST00000591338	PNMA6F	A0A0J9YX94	578 aa		13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	CXCL11	O14625	94 aa		13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	IRF6	O14896	467 aa		13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	STAT2	P52630	851 aa		13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	HMGCS2	P54868	508 aa		13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	IK	Q13123	557 aa	Predicted RBP	13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	TRIM29	Q14134	588 aa		13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	FAM160B2	Q86V87	743 aa		13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	HOMER1	Q86YM7	354 aa		13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	TNPO1	Q92973	898 aa	Known RBP	13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	OPTN	Q96CV9	577 aa		13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	TMOD4	Q9NZQ9	345 aa		13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	SEC63	Q9UGP8	760 aa	Known RBP	13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	PRR12	Q9ULL5	1215 aa		13.75	□□□□□ -0.21
LINC00662-208	ENST00000591338	TRPM7	Q96QT4	1865 aa		13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	ZBTB5	O15062	677 aa		13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	F13A1	P00488	732 aa		13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	XBP1	P17861	261 aa		13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	VCAM1	P19320	739 aa		13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	PPIL2	Q13356	520 aa		13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	SMC1B	Q8NDV3	1235 aa		13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	SHISA4	Q96DD7	197 aa		13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	SH3GLB2	Q9NR46	395 aa		13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	FBXO28	Q9NVF7	368 aa		13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	VPS54	Q9P1Q0	977 aa		13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	KCNJ14	Q9UNX9	436 aa		13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	KCNH4	Q9UQ05	1017 aa		13.74	□□□□□ -0.21
LINC00662-208	ENST00000591338	PASK	Q96RG2	1323 aa		13.73	□□□□□ -0.21
LINC00662-208	ENST00000591338	GJA5	P36382	358 aa		13.73	□□□□□ -0.21
LINC00662-208	ENST00000591338	SNAP25	P60880	206 aa		13.73	□□□□□ -0.21
LINC00662-208	ENST00000591338	WWC2	Q6AWC2	1192 aa		13.73	□□□□□ -0.21
LINC00662-208	ENST00000591338	MCTP1	Q6DN14	999 aa		13.73	□□□□□ -0.21
LINC00662-208	ENST00000591338	HEATR3	Q7Z4Q2	680 aa		13.73	□□□□□ -0.21
LINC00662-208	ENST00000591338	FERMT3	Q86UX7	667 aa		13.73	□□□□□ -0.21
LINC00662-208	ENST00000591338	PRPF38A	Q8NAV1	312 aa	Known RBP	13.73	□□□□□ -0.21
LINC00662-208	ENST00000591338	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.73	□□□□□ -0.21
LINC00662-208	ENST00000591338	KIFC2	Q96AC6	838 aa		13.73	□□□□□ -0.21
LINC00662-208	ENST00000591338	PHF20	Q9BVI0	1012 aa		13.73	□□□□□ -0.21
LINC00662-208	ENST00000591338	BARHL2	Q9NY43	387 aa		13.73	□□□□□ -0.21
LINC00662-208	ENST00000591338		A0A0G2JLL6	359 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	STXBP3	O00186	592 aa		13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	PPP1R11	O60927	126 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	TOMM70	O94826	608 aa		13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	MMP1	P03956	469 aa		13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	HOXB3	P14651	431 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	NLRP5	P59047	1200 aa		13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	REST	Q13127	1097 aa		13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	CDC37	Q16543	378 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	QRICH1	Q2TAL8	776 aa		13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	TYW1B	Q6NUM6	668 aa		13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	CATSPERG	Q6ZRH7	1159 aa		13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	COA7	Q96BR5	231 aa		13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	SLF1	Q9BQI6	1058 aa		13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	TANGO6	Q9C0B7	1094 aa		13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC00662-208	ENST00000591338	PTPRF	P10586	1907 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	USP17L15	C9J2P7	530 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	USP17L13	C9JLJ4	530 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	USP17L11	C9JVI0	530 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	USP17L18	D6R9N7	530 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	USP17L22	D6RA61	530 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	USP17L17	D6RBQ6	530 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	USP17L19	D6RCP7	530 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	USP17L20	D6RJB6	530 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	hCG_1984214	I3L0E3	225 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	FLOT1	O75955	427 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	HUNK	P57058	714 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	KIF23	Q02241	960 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	USP17L24	Q0WX57	530 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	SAFB	Q15424	915 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	GADL1	Q6ZQY3	521 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	FAM177A1	Q8N128	213 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	ZNF710	Q8N1W2	664 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	ZNF713	Q8N859	430 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	WNK4	Q96J92	1243 aa		13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	RANBP17	Q9H2T7	1088 aa	Known RBP	13.71	□□□□□ -0.21
LINC00662-208	ENST00000591338	BTBD18	B2RXH4	712 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms