RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 RIC8AQ9NPQ8 531 aa14.85□□□□□ -0.03
PTBP1-216ENST00000590887 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.85□□□□□ -0.03
PTBP1-216ENST00000590887 USP2O75604 605 aaPredicted RBP14.84□□□□□ -0.03
PTBP1-216ENST00000590887 NR5A1Q13285 461 aa14.84□□□□□ -0.03
PTBP1-216ENST00000590887 NONOQ15233 471 aaKnown RBP eCLIP14.84□□□□□ -0.032e-7■■■□□ 19.1
PTBP1-216ENST00000590887 QRICH1Q2TAL8 776 aa14.84□□□□□ -0.03
PTBP1-216ENST00000590887 FAM83BQ5T0W9 1011 aa14.84□□□□□ -0.03
PTBP1-216ENST00000590887 PIK3AP1Q6ZUJ8 805 aa14.84□□□□□ -0.03
PTBP1-216ENST00000590887 SPICE1Q8N0Z3 855 aa14.84□□□□□ -0.03
PTBP1-216ENST00000590887 CDCA5Q96FF9 252 aa14.84□□□□□ -0.03
PTBP1-216ENST00000590887 CCDC34Q96HJ3 373 aa14.84□□□□□ -0.03
PTBP1-216ENST00000590887 PSTPIP2Q9H939 334 aa14.84□□□□□ -0.03
PTBP1-216ENST00000590887 PRR12Q9ULL5 1215 aa14.84□□□□□ -0.03
PTBP1-216ENST00000590887 PCDHA1Q9Y5I3 950 aa14.84□□□□□ -0.03
PTBP1-216ENST00000590887 LAD1O00515 517 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 CUTAO60888 179 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 FOSP01100 380 aaPredicted RBP14.83□□□□□ -0.04
PTBP1-216ENST00000590887 SPP2Q13103 211 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 ZYXQ15942 572 aaKnown RBP14.83□□□□□ -0.04
PTBP1-216ENST00000590887 SHROOM1Q2M3G4 852 aaPredicted RBP14.83□□□□□ -0.04
PTBP1-216ENST00000590887 TTC38Q5R3I4 469 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 PRAMEF18Q5VWM3 479 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 SAMD3Q8N6K7 520 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 KRI1Q8N9T8 703 aaKnown RBP14.83□□□□□ -0.04
PTBP1-216ENST00000590887 FERMT2Q96AC1 680 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 C12orf42Q96LP6 360 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 SLF1Q9BQI6 1058 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 CPVLQ9H3G5 476 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 EHMT1Q9H9B1 1298 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 DDX19AQ9NUU7 478 aaKnown RBP14.83□□□□□ -0.04
PTBP1-216ENST00000590887 FAM13BQ9NYF5 915 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 PCDHA6Q9UN73 950 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 MRPL11Q9Y3B7 192 aaKnown RBP14.83□□□□□ -0.04
PTBP1-216ENST00000590887 PCDHA8Q9Y5H6 950 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 CLIC4Q9Y696 253 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 ZHX2Q9Y6X8 837 aa14.83□□□□□ -0.04
PTBP1-216ENST00000590887 ADM5C9JUS6 153 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 ZBED4O75132 1171 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 TOMM70O94826 608 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 PPATQ06203 517 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 AP3B2Q13367 1082 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 MAP3K11Q16584 847 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 SLC35G1Q2M3R5 365 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 CCDC183Q5T5S1 534 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 CAVIN1Q6NZI2 390 aaKnown RBP14.82□□□□□ -0.04
PTBP1-216ENST00000590887 GPT2Q8TD30 523 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 OXER1Q8TDS5 423 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 MRPS27Q92552 414 aaKnown RBP14.82□□□□□ -0.04
PTBP1-216ENST00000590887 TNFRSF25Q93038 417 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 ZKSCAN4Q969J2 545 aaPredicted RBP14.82□□□□□ -0.04
PTBP1-216ENST00000590887 KIFC2Q96AC6 838 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 COA7Q96BR5 231 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 NUP88Q99567 741 aaPredicted RBP14.82□□□□□ -0.04
PTBP1-216ENST00000590887 PYM1Q9BRP8 204 aaKnown RBP14.82□□□□□ -0.04
PTBP1-216ENST00000590887 TANGO6Q9C0B7 1094 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 RANBP17Q9H2T7 1088 aaKnown RBP14.82□□□□□ -0.04
PTBP1-216ENST00000590887 NMRK2Q9NPI5 230 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 ABCB11O95342 1321 aa14.82□□□□□ -0.04
PTBP1-216ENST00000590887 CTAGE5O15320 804 aa14.81□□□□□ -0.04
PTBP1-216ENST00000590887 GADD45BO75293 160 aaPredicted RBP14.81□□□□□ -0.04
PTBP1-216ENST00000590887 ATP2B1P20020 1258 aa14.81□□□□□ -0.04
PTBP1-216ENST00000590887 CMA1P23946 247 aa14.81□□□□□ -0.04
PTBP1-216ENST00000590887 FKBP1BP68106 108 aa14.81□□□□□ -0.04
PTBP1-216ENST00000590887 MTMR2Q13614 643 aa14.81□□□□□ -0.04
PTBP1-216ENST00000590887 GSE1Q14687 1217 aa14.81□□□□□ -0.04
PTBP1-216ENST00000590887 NPY5RQ15761 445 aa14.81□□□□□ -0.04
PTBP1-216ENST00000590887 RASGRP2Q7LDG7 609 aa14.81□□□□□ -0.04
PTBP1-216ENST00000590887 LDHDQ86WU2 507 aa14.81□□□□□ -0.04
PTBP1-216ENST00000590887 CCAR1Q8IX12 1150 aaKnown RBP14.81□□□□□ -0.04
PTBP1-216ENST00000590887 ZNF579Q8NAF0 562 aaKnown RBP14.81□□□□□ -0.04
PTBP1-216ENST00000590887 CHAMP1Q96JM3 812 aa14.81□□□□□ -0.04
PTBP1-216ENST00000590887 MAF1Q9H063 256 aa14.81□□□□□ -0.04
PTBP1-216ENST00000590887 PCDHA7Q9UN72 937 aa14.81□□□□□ -0.04
PTBP1-216ENST00000590887 M0R2N6 131 aa14.8□□□□□ -0.04
PTBP1-216ENST00000590887 CXCL11O14625 94 aa14.8□□□□□ -0.04
PTBP1-216ENST00000590887 PABPC4Q13310 644 aaKnown RBP eCLIP14.8□□□□□ -0.04
PTBP1-216ENST00000590887 PRKG1Q13976 671 aa14.8□□□□□ -0.04
PTBP1-216ENST00000590887 PTPAQ15257 358 aa14.8□□□□□ -0.04
PTBP1-216ENST00000590887 SH3D19Q5HYK7 790 aa14.8□□□□□ -0.04
PTBP1-216ENST00000590887 ARL6IP4Q66PJ3 421 aaKnown RBP14.8□□□□□ -0.04
PTBP1-216ENST00000590887 NEK8Q86SG6 692 aa14.8□□□□□ -0.04
PTBP1-216ENST00000590887 ERO1BQ86YB8 467 aa14.8□□□□□ -0.04
PTBP1-216ENST00000590887 MCF2L2Q86YR7 1114 aa14.8□□□□□ -0.04
PTBP1-216ENST00000590887 HOXC10Q9NYD6 342 aa14.8□□□□□ -0.04
PTBP1-216ENST00000590887 MAP3K20Q9NYL2 800 aaKnown RBP14.8□□□□□ -0.04
PTBP1-216ENST00000590887 HOOK1Q9UJC3 728 aaKnown RBP14.8□□□□□ -0.04
PTBP1-216ENST00000590887 RABGAP1Q9Y3P9 1069 aa14.8□□□□□ -0.04
PTBP1-216ENST00000590887 AFG3L2Q9Y4W6 797 aa14.8□□□□□ -0.04
PTBP1-216ENST00000590887 MYPNQ86TC9 1320 aa14.8□□□□□ -0.04
PTBP1-216ENST00000590887 SPDYE3A6NKU9 549 aa14.79□□□□□ -0.04
PTBP1-216ENST00000590887 USP17L15C9J2P7 530 aa14.79□□□□□ -0.04
PTBP1-216ENST00000590887 USP17L13C9JLJ4 530 aa14.79□□□□□ -0.04
PTBP1-216ENST00000590887 USP17L11C9JVI0 530 aa14.79□□□□□ -0.04
PTBP1-216ENST00000590887 USP17L18D6R9N7 530 aa14.79□□□□□ -0.04
PTBP1-216ENST00000590887 USP17L22D6RA61 530 aa14.79□□□□□ -0.04
PTBP1-216ENST00000590887 USP17L17D6RBQ6 530 aa14.79□□□□□ -0.04
PTBP1-216ENST00000590887 USP17L19D6RCP7 530 aa14.79□□□□□ -0.04
PTBP1-216ENST00000590887 USP17L20D6RJB6 530 aa14.79□□□□□ -0.04
PTBP1-216ENST00000590887 KINO60870 393 aaKnown RBP14.79□□□□□ -0.04
PTBP1-216ENST00000590887 FLOT1O75955 427 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms