RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 PNMA2Q9UL42 364 aa15.78■□□□□ 0.12
VMP1-210ENST00000589823 ADGRA2Q96PE1 1338 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 RLFQ13129 1914 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 PNMA6FA0A0J9YX94 578 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 ICAM1P05362 532 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 ERVK-9P63128 1117 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 ERVK-24P63145 666 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 CCNA1P78396 465 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 FUT2Q10981 343 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 TRAF1Q13077 416 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 TMEM132BQ14DG7 1078 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 NTRK3Q16288 839 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 FAM110CQ1W6H9 321 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 SLC35G1Q2M3R5 365 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 QRICH1Q2TAL8 776 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 C17orf99Q6UX52 265 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 FBXO11Q86XK2 927 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 REPS2Q8NFH8 660 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 PHKBQ93100 1093 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 MTMR8Q96EF0 704 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 SLC26A6Q9BXS9 759 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 TEX13BQ9BXU2 312 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 RNF26Q9BY78 433 aaPredicted RBP15.77■□□□□ 0.12
VMP1-210ENST00000589823 SPATC1LQ9H0A9 340 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 TXNRD2Q9NNW7 524 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 WBP1LQ9NX94 342 aa15.77■□□□□ 0.12
VMP1-210ENST00000589823 V9GY48 417 aaPredicted RBP15.77■□□□□ 0.12
VMP1-210ENST00000589823 PARP14Q460N5 1801 aa15.77■□□□□ 0.11
VMP1-210ENST00000589823 ATP2A1O14983 1001 aa15.76■□□□□ 0.11
VMP1-210ENST00000589823 CNMDO75829 334 aa15.76■□□□□ 0.11
VMP1-210ENST00000589823 BCRP11274 1271 aa15.76■□□□□ 0.11
VMP1-210ENST00000589823 STAT3P40763 770 aa15.76■□□□□ 0.11
VMP1-210ENST00000589823 SLC4A3P48751 1232 aa15.76■□□□□ 0.11
VMP1-210ENST00000589823 SNRNP48Q6IEG0 339 aaKnown RBP15.76■□□□□ 0.11
VMP1-210ENST00000589823 CCAR1Q8IX12 1150 aaKnown RBP15.76■□□□□ 0.11
VMP1-210ENST00000589823 JMYQ8N9B5 988 aa15.76■□□□□ 0.11
VMP1-210ENST00000589823 LLPHQ9BRT6 129 aaKnown RBP15.76■□□□□ 0.11
VMP1-210ENST00000589823 AMNQ9BXJ7 453 aa15.76■□□□□ 0.11
VMP1-210ENST00000589823 ZNF214Q9UL59 606 aaPredicted RBP15.76■□□□□ 0.11
VMP1-210ENST00000589823 CCPG1Q9ULG6 757 aa15.76■□□□□ 0.11
VMP1-210ENST00000589823 A0A0G2JMZ2 1700 aa15.75■□□□□ 0.11
VMP1-210ENST00000589823 hCG_1642624A0A1W2PR95 340 aa15.75■□□□□ 0.11
VMP1-210ENST00000589823 PRPF3O43395 683 aaKnown RBP15.75■□□□□ 0.11
VMP1-210ENST00000589823 PEX10O60683 326 aa15.75■□□□□ 0.11
VMP1-210ENST00000589823 FMNL1O95466 1100 aaPredicted RBP15.75■□□□□ 0.11
VMP1-210ENST00000589823 SLC25A27O95847 323 aa15.75■□□□□ 0.11
VMP1-210ENST00000589823 COPB2P35606 906 aa15.75■□□□□ 0.11
VMP1-210ENST00000589823 ST3GAL1Q11201 340 aa15.75■□□□□ 0.11
VMP1-210ENST00000589823 TKFCQ3LXA3 575 aa15.75■□□□□ 0.11
VMP1-210ENST00000589823 POTEEQ6S8J3 1075 aa15.75■□□□□ 0.11
VMP1-210ENST00000589823 AGBL1Q96MI9 1066 aa15.75■□□□□ 0.11
VMP1-210ENST00000589823 R3HDMLQ9H3Y0 253 aa15.75■□□□□ 0.11
VMP1-210ENST00000589823 CWC22Q9HCG8 908 aaKnown RBP15.75■□□□□ 0.11
VMP1-210ENST00000589823 ZNF536O15090 1300 aa15.74■□□□□ 0.11
VMP1-210ENST00000589823 STK36Q9NRP7 1315 aa15.74■□□□□ 0.11
VMP1-210ENST00000589823 PTPDC1A2A3K4 754 aa15.74■□□□□ 0.11
VMP1-210ENST00000589823 PPFIA3O75145 1194 aa15.74■□□□□ 0.11
VMP1-210ENST00000589823 CTDNEP1O95476 244 aa15.74■□□□□ 0.11
VMP1-210ENST00000589823 ALAS1P13196 640 aa15.74■□□□□ 0.11
VMP1-210ENST00000589823 BECN1Q14457 450 aa15.74■□□□□ 0.11
VMP1-210ENST00000589823 Q3C1V9 767 aa15.74■□□□□ 0.11
VMP1-210ENST00000589823 USH1GQ495M9 461 aa15.74■□□□□ 0.11
VMP1-210ENST00000589823 NCAPG2Q86XI2 1143 aa15.74■□□□□ 0.11
VMP1-210ENST00000589823 RIOX2Q8IUF8 465 aa15.74■□□□□ 0.11
VMP1-210ENST00000589823 NSUN7Q8NE18 718 aaKnown RBP15.74■□□□□ 0.11
VMP1-210ENST00000589823 MOV10L1Q9BXT6 1211 aaKnown RBP15.74■□□□□ 0.11
VMP1-210ENST00000589823 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.74■□□□□ 0.11
VMP1-210ENST00000589823 ABCB11O95342 1321 aa15.73■□□□□ 0.11
VMP1-210ENST00000589823 hCG_1984214I3L0E3 225 aa15.73■□□□□ 0.11
VMP1-210ENST00000589823 DEXIO95424 95 aa15.73■□□□□ 0.11
VMP1-210ENST00000589823 SCG2P13521 617 aa15.73■□□□□ 0.11
VMP1-210ENST00000589823 ANP32AP39687 249 aaKnown RBP15.73■□□□□ 0.11
VMP1-210ENST00000589823 HMGN5P82970 282 aaKnown RBP15.73■□□□□ 0.11
VMP1-210ENST00000589823 SP3Q02447 781 aa15.73■□□□□ 0.11
VMP1-210ENST00000589823 CUL4AQ13619 759 aa15.73■□□□□ 0.11
VMP1-210ENST00000589823 PFKFB3Q16875 520 aaPredicted RBP15.73■□□□□ 0.11
VMP1-210ENST00000589823 WDR78Q5VTH9 848 aa15.73■□□□□ 0.11
VMP1-210ENST00000589823 HEATR3Q7Z4Q2 680 aa15.73■□□□□ 0.11
VMP1-210ENST00000589823 ZNF713Q8N859 430 aaPredicted RBP15.73■□□□□ 0.11
VMP1-210ENST00000589823 SHCBP1Q8NEM2 672 aa15.73■□□□□ 0.11
VMP1-210ENST00000589823 WASF1Q92558 559 aa15.73■□□□□ 0.11
VMP1-210ENST00000589823 HOMER2Q9NSB8 354 aa15.73■□□□□ 0.11
VMP1-210ENST00000589823 ORC3Q9UBD5 711 aaPredicted RBP15.73■□□□□ 0.11
VMP1-210ENST00000589823 FBXO40Q9UH90 709 aa15.73■□□□□ 0.11
VMP1-210ENST00000589823 MRPL11Q9Y3B7 192 aaKnown RBP15.73■□□□□ 0.11
VMP1-210ENST00000589823 PCDHA1Q9Y5I3 950 aa15.73■□□□□ 0.11
VMP1-210ENST00000589823 CEP350Q5VT06 3117 aa15.72■□□□□ 0.11
VMP1-210ENST00000589823 GPR25O00155 361 aa15.72■□□□□ 0.11
VMP1-210ENST00000589823 JAK2O60674 1132 aa15.72■□□□□ 0.11
VMP1-210ENST00000589823 PPP1R11O60927 126 aaPredicted RBP15.72■□□□□ 0.11
VMP1-210ENST00000589823 ERCC3P19447 782 aa15.72■□□□□ 0.11
VMP1-210ENST00000589823 MAPK4P31152 587 aa15.72■□□□□ 0.11
VMP1-210ENST00000589823 KIF22Q14807 665 aa15.72■□□□□ 0.11
VMP1-210ENST00000589823 CHST13Q8NET6 341 aa15.72■□□□□ 0.11
VMP1-210ENST00000589823 SMARCC2Q8TAQ2 1214 aa15.72■□□□□ 0.11
VMP1-210ENST00000589823 COA7Q96BR5 231 aa15.72■□□□□ 0.11
VMP1-210ENST00000589823 DDX11Q96FC9 970 aa15.72■□□□□ 0.11
VMP1-210ENST00000589823 TRERF1Q96PN7 1200 aa15.72■□□□□ 0.11
VMP1-210ENST00000589823 MROH8Q9H579 483 aa15.72■□□□□ 0.11
VMP1-210ENST00000589823 RNF146Q9NTX7 359 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms