RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 CUL4AQ13619 759 aa14.09□□□□□ -0.15
DNMT1-218ENST00000589294 TMEM132BQ14DG7 1078 aa14.09□□□□□ -0.15
DNMT1-218ENST00000589294 JMYQ8N9B5 988 aa14.09□□□□□ -0.15
DNMT1-218ENST00000589294 PIGSQ96S52 555 aa14.09□□□□□ -0.15
DNMT1-218ENST00000589294 TEX13BQ9BXU2 312 aa14.09□□□□□ -0.15
DNMT1-218ENST00000589294 WBP1LQ9NX94 342 aa14.09□□□□□ -0.15
DNMT1-218ENST00000589294 BTBD7Q9P203 1132 aa14.09□□□□□ -0.15
DNMT1-218ENST00000589294 SEC63Q9UGP8 760 aaKnown RBP14.09□□□□□ -0.15
DNMT1-218ENST00000589294 ZNF214Q9UL59 606 aaPredicted RBP14.09□□□□□ -0.15
DNMT1-218ENST00000589294 ADGRA2Q96PE1 1338 aa14.09□□□□□ -0.15
DNMT1-218ENST00000589294 THSD7BQ9C0I4 1608 aa14.08□□□□□ -0.15
DNMT1-218ENST00000589294 RLFQ13129 1914 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 CNMDO75829 334 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 FMNL1O95466 1100 aaPredicted RBP14.08□□□□□ -0.16
DNMT1-218ENST00000589294 CTDNEP1O95476 244 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 SLC25A27O95847 323 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 BCRP11274 1271 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 COPB2P35606 906 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 ERVK-9P63128 1117 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 ERVK-24P63145 666 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 CCNA1P78396 465 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 CDC37Q16543 378 aaPredicted RBP14.08□□□□□ -0.16
DNMT1-218ENST00000589294 FAM110CQ1W6H9 321 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 QRICH1Q2TAL8 776 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 Q3C1V9 767 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 TKFCQ3LXA3 575 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 NOM1Q5C9Z4 860 aaKnown RBP14.08□□□□□ -0.16
DNMT1-218ENST00000589294 FBXO11Q86XK2 927 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 CCDC83Q8IWF9 413 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 ANKRD13CQ8N6S4 541 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 PHKBQ93100 1093 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 AMNQ9BXJ7 453 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 SLC26A6Q9BXS9 759 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 SPATC1LQ9H0A9 340 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 TXNRD2Q9NNW7 524 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.08□□□□□ -0.16
DNMT1-218ENST00000589294 ZNF536O15090 1300 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 CNTNAP5Q8WYK1 1306 aa14.08□□□□□ -0.16
DNMT1-218ENST00000589294 TBC1D8O95759 1140 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 SNAP25P60880 206 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 ST3GAL1Q11201 340 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 BECN1Q14457 450 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 PFKFB3Q16875 520 aaPredicted RBP14.07□□□□□ -0.16
DNMT1-218ENST00000589294 CCDC174Q6PII3 467 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 HOMER1Q86YM7 354 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 RIOX2Q8IUF8 465 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 CPXCR1Q8N123 301 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 NSUN7Q8NE18 718 aaKnown RBP14.07□□□□□ -0.16
DNMT1-218ENST00000589294 SHCBP1Q8NEM2 672 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 SMARCC2Q8TAQ2 1214 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 WASF1Q92558 559 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 INTS4Q96HW7 963 aaKnown RBP14.07□□□□□ -0.16
DNMT1-218ENST00000589294 PAGR1Q9BTK6 254 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 MAF1Q9H063 256 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 RAVER2Q9HCJ3 691 aaKnown RBP14.07□□□□□ -0.16
DNMT1-218ENST00000589294 CPA4Q9UI42 421 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 PCNTO95613 3336 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 STK36Q9NRP7 1315 aa14.07□□□□□ -0.16
DNMT1-218ENST00000589294 hCG_1984214I3L0E3 225 aa14.06□□□□□ -0.16
DNMT1-218ENST00000589294 DEXIO95424 95 aa14.06□□□□□ -0.16
DNMT1-218ENST00000589294 HMGN5P82970 282 aaKnown RBP14.06□□□□□ -0.16
DNMT1-218ENST00000589294 PLS1Q14651 629 aa14.06□□□□□ -0.16
DNMT1-218ENST00000589294 FAM177A1Q8N128 213 aaPredicted RBP14.06□□□□□ -0.16
DNMT1-218ENST00000589294 ZNF713Q8N859 430 aaPredicted RBP14.06□□□□□ -0.16
DNMT1-218ENST00000589294 AGBL1Q96MI9 1066 aa14.06□□□□□ -0.16
DNMT1-218ENST00000589294 R3HDMLQ9H3Y0 253 aa14.06□□□□□ -0.16
DNMT1-218ENST00000589294 MROH8Q9H579 483 aa14.06□□□□□ -0.16
DNMT1-218ENST00000589294 CCPG1Q9ULG6 757 aa14.06□□□□□ -0.16
DNMT1-218ENST00000589294 PCDHA1Q9Y5I3 950 aa14.06□□□□□ -0.16
DNMT1-218ENST00000589294 BAZ2BQ9UIF8 2168 aaKnown RBP14.05□□□□□ -0.16
DNMT1-218ENST00000589294 PTPDC1A2A3K4 754 aa14.05□□□□□ -0.16
DNMT1-218ENST00000589294 PPP1R11O60927 126 aaPredicted RBP14.05□□□□□ -0.16
DNMT1-218ENST00000589294 SCG2P13521 617 aa14.05□□□□□ -0.16
DNMT1-218ENST00000589294 PKN1Q16512 942 aa14.05□□□□□ -0.16
DNMT1-218ENST00000589294 SNRNP48Q6IEG0 339 aaKnown RBP14.05□□□□□ -0.16
DNMT1-218ENST00000589294 TEX2Q8IWB9 1127 aa14.05□□□□□ -0.16
DNMT1-218ENST00000589294 RGS22Q8NE09 1264 aa14.05□□□□□ -0.16
DNMT1-218ENST00000589294 CHST13Q8NET6 341 aa14.05□□□□□ -0.16
DNMT1-218ENST00000589294 PIBF1Q8WXW3 757 aa14.05□□□□□ -0.16
DNMT1-218ENST00000589294 MOV10L1Q9BXT6 1211 aaKnown RBP14.05□□□□□ -0.16
DNMT1-218ENST00000589294 SH3GLB2Q9NR46 395 aa14.05□□□□□ -0.16
DNMT1-218ENST00000589294 TSHZ2Q9NRE2 1034 aa14.05□□□□□ -0.16
DNMT1-218ENST00000589294 ORC3Q9UBD5 711 aaPredicted RBP14.05□□□□□ -0.16
DNMT1-218ENST00000589294 FBXO40Q9UH90 709 aa14.05□□□□□ -0.16
DNMT1-218ENST00000589294 MRPL11Q9Y3B7 192 aaKnown RBP14.05□□□□□ -0.16
DNMT1-218ENST00000589294 ABCB11O95342 1321 aa14.05□□□□□ -0.16
DNMT1-218ENST00000589294 PARP14Q460N5 1801 aa14.04□□□□□ -0.16
DNMT1-218ENST00000589294 hCG_1642624A0A1W2PR95 340 aa14.04□□□□□ -0.16
DNMT1-218ENST00000589294 GPR25O00155 361 aa14.04□□□□□ -0.16
DNMT1-218ENST00000589294 STRNO43815 780 aa14.04□□□□□ -0.16
DNMT1-218ENST00000589294 FDPSP14324 419 aaKnown RBP14.04□□□□□ -0.16
DNMT1-218ENST00000589294 MAPK4P31152 587 aa14.04□□□□□ -0.16
DNMT1-218ENST00000589294 SP3Q02447 781 aa14.04□□□□□ -0.16
DNMT1-218ENST00000589294 CCAR1Q8IX12 1150 aaKnown RBP14.04□□□□□ -0.16
DNMT1-218ENST00000589294 SAMD3Q8N6K7 520 aa14.04□□□□□ -0.16
DNMT1-218ENST00000589294 TRERF1Q96PN7 1200 aa14.04□□□□□ -0.16
DNMT1-218ENST00000589294 BARHL2Q9NY43 387 aa14.04□□□□□ -0.16
DNMT1-218ENST00000589294 KIF3AQ9Y496 699 aa14.04□□□□□ -0.16
DNMT1-218ENST00000589294 RIPK3Q9Y572 518 aa14.04□□□□□ -0.16
DNMT1-218ENST00000589294 JAK2O60674 1132 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms