RNA–Protein interactions for RNA: ENST00000588671.2

PCSK4-208, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 4

Gene PCSK4, Length 720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-208ENST00000588671 ICAM1P05362 532 aa19.32■□□□□ 0.68
PCSK4-208ENST00000588671 PDHBP11177 359 aa19.32■□□□□ 0.68
PCSK4-208ENST00000588671 CYBAP13498 195 aa19.32■□□□□ 0.68
PCSK4-208ENST00000588671 LHX8Q68G74 356 aa19.32■□□□□ 0.68
PCSK4-208ENST00000588671 CHMP4CQ96CF2 233 aa19.32■□□□□ 0.68
PCSK4-208ENST00000588671 TRERF1Q96PN7 1200 aa19.32■□□□□ 0.68
PCSK4-208ENST00000588671 GPCPD1Q9NPB8 672 aa19.32■□□□□ 0.68
PCSK4-208ENST00000588671 CCPG1Q9ULG6 757 aa19.32■□□□□ 0.68
PCSK4-208ENST00000588671 SYNGAP1Q96PV0 1343 aa19.31■□□□□ 0.68
PCSK4-208ENST00000588671 POTEB2H3BUK9 544 aa19.31■□□□□ 0.68
PCSK4-208ENST00000588671 ALAS1P13196 640 aa19.31■□□□□ 0.68
PCSK4-208ENST00000588671 ZNF543Q08ER8 600 aa19.31■□□□□ 0.68
PCSK4-208ENST00000588671 BMP2KLQ5H9B9 411 aa19.31■□□□□ 0.68
PCSK4-208ENST00000588671 IFIT1BQ5T764 474 aaKnown RBP19.31■□□□□ 0.68
PCSK4-208ENST00000588671 CCDC174Q6PII3 467 aa19.31■□□□□ 0.68
PCSK4-208ENST00000588671 PNMA1Q8ND90 353 aa19.31■□□□□ 0.68
PCSK4-208ENST00000588671 NCOA7Q8NI08 942 aa19.31■□□□□ 0.68
PCSK4-208ENST00000588671 DIS3LQ8TF46 1054 aaKnown RBP19.31■□□□□ 0.68
PCSK4-208ENST00000588671 MPHOSPH6Q99547 160 aaKnown RBP19.31■□□□□ 0.68
PCSK4-208ENST00000588671 ZKSCAN3Q9BRR0 538 aa19.31■□□□□ 0.68
PCSK4-208ENST00000588671 HOMER2Q9NSB8 354 aa19.31■□□□□ 0.68
PCSK4-208ENST00000588671 RNF146Q9NTX7 359 aa19.31■□□□□ 0.68
PCSK4-208ENST00000588671 COLQQ9Y215 455 aaPredicted RBP19.31■□□□□ 0.68
PCSK4-208ENST00000588671 RIPK3Q9Y572 518 aa19.31■□□□□ 0.68
PCSK4-208ENST00000588671 ZNF236Q9UL36 1845 aa19.3■□□□□ 0.68
PCSK4-208ENST00000588671 ASB14A6NK59 587 aa19.3■□□□□ 0.68
PCSK4-208ENST00000588671 KBTBD13C9JR72 458 aa19.3■□□□□ 0.68
PCSK4-208ENST00000588671 IGHA2P01877 340 aa19.3■□□□□ 0.68
PCSK4-208ENST00000588671 RARBP10826 455 aa19.3■□□□□ 0.68
PCSK4-208ENST00000588671 ASPRV1Q53RT3 343 aa19.3■□□□□ 0.68
PCSK4-208ENST00000588671 MAMDC4Q6UXC1 1216 aa19.3■□□□□ 0.68
PCSK4-208ENST00000588671 ALPK3Q96L96 1907 aa19.29■□□□□ 0.68
PCSK4-208ENST00000588671 TNKSO95271 1327 aa19.29■□□□□ 0.68
PCSK4-208ENST00000588671 FRMPD2Q68DX3 1309 aaPredicted RBP19.29■□□□□ 0.68
PCSK4-208ENST00000588671 DNAJC25-GNG10A0A024R161 153 aa19.29■□□□□ 0.68
PCSK4-208ENST00000588671 B4DLN1 442 aa19.29■□□□□ 0.68
PCSK4-208ENST00000588671 DNM1LO00429 736 aa19.29■□□□□ 0.68
PCSK4-208ENST00000588671 AKR1A1P14550 325 aa19.29■□□□□ 0.68
PCSK4-208ENST00000588671 MRPL12P52815 198 aaKnown RBP19.29■□□□□ 0.68
PCSK4-208ENST00000588671 MAP4K1Q92918 833 aa19.29■□□□□ 0.68
PCSK4-208ENST00000588671 AGBL1Q96MI9 1066 aa19.29■□□□□ 0.68
PCSK4-208ENST00000588671 MAF1Q9H063 256 aa19.29■□□□□ 0.68
PCSK4-208ENST00000588671 RANBP17Q9H2T7 1088 aaKnown RBP19.29■□□□□ 0.68
PCSK4-208ENST00000588671 FAM184BQ9ULE4 1060 aa19.29■□□□□ 0.68
PCSK4-208ENST00000588671 PARP1P09874 1014 aaKnown RBP19.28■□□□□ 0.68
PCSK4-208ENST00000588671 SNHG28P0DPA3 235 aa19.28■□□□□ 0.68
PCSK4-208ENST00000588671 SLC16A2P36021 539 aa19.28■□□□□ 0.68
PCSK4-208ENST00000588671 MNX1P50219 401 aaPredicted RBP19.28■□□□□ 0.68
PCSK4-208ENST00000588671 TRAF1Q13077 416 aa19.28■□□□□ 0.68
PCSK4-208ENST00000588671 RNF20Q5VTR2 975 aa19.28■□□□□ 0.68
PCSK4-208ENST00000588671 ABHD16BQ9H3Z7 469 aa19.28■□□□□ 0.68
PCSK4-208ENST00000588671 SPC25Q9HBM1 224 aa19.28■□□□□ 0.68
PCSK4-208ENST00000588671 ADD3Q9UEY8 706 aaKnown RBP19.28■□□□□ 0.68
PCSK4-208ENST00000588671 CENPBP07199 599 aaPredicted RBP19.27■□□□□ 0.68
PCSK4-208ENST00000588671 PTH1RQ03431 593 aa19.27■□□□□ 0.68
PCSK4-208ENST00000588671 TTBK2Q6IQ55 1244 aa19.27■□□□□ 0.68
PCSK4-208ENST00000588671 RNF180Q86T96 592 aa19.27■□□□□ 0.68
PCSK4-208ENST00000588671 ENAHQ8N8S7 591 aaPredicted RBP19.27■□□□□ 0.68
PCSK4-208ENST00000588671 COL11A1P12107 1806 aaPredicted RBP19.27■□□□□ 0.68
PCSK4-208ENST00000588671 FRMPD3Q5JV73 1810 aa19.27■□□□□ 0.68
PCSK4-208ENST00000588671 ZNF536O15090 1300 aa19.26■□□□□ 0.67
PCSK4-208ENST00000588671 LOC102724159A0A0B4J2E5 919 aa19.26■□□□□ 0.67
PCSK4-208ENST00000588671 IFIT3O14879 490 aaKnown RBP19.26■□□□□ 0.67
PCSK4-208ENST00000588671 DHX16O60231 1041 aaKnown RBP19.26■□□□□ 0.67
PCSK4-208ENST00000588671 CYP21A2P08686 494 aa19.26■□□□□ 0.67
PCSK4-208ENST00000588671 PWP2Q15269 919 aaKnown RBP19.26■□□□□ 0.67
PCSK4-208ENST00000588671 PRAMEF19Q5SWL8 479 aa19.26■□□□□ 0.67
PCSK4-208ENST00000588671 CHRDL2Q6WN34 429 aa19.26■□□□□ 0.67
PCSK4-208ENST00000588671 TMTC2Q8N394 836 aa19.26■□□□□ 0.67
PCSK4-208ENST00000588671 TRPV1Q8NER1 839 aa19.26■□□□□ 0.67
PCSK4-208ENST00000588671 ESYT1Q9BSJ8 1104 aa19.26■□□□□ 0.67
PCSK4-208ENST00000588671 MTA3Q9BTC8 594 aa19.26■□□□□ 0.67
PCSK4-208ENST00000588671 WDR19Q8NEZ3 1342 aa19.25■□□□□ 0.67
PCSK4-208ENST00000588671 MYCNP04198 464 aaPredicted RBP19.25■□□□□ 0.67
PCSK4-208ENST00000588671 ERICH6BQ5W0A0 696 aa19.25■□□□□ 0.67
PCSK4-208ENST00000588671 NSMFQ6X4W1 530 aa19.25■□□□□ 0.67
PCSK4-208ENST00000588671 SENP6Q9GZR1 1112 aaPredicted RBP19.25■□□□□ 0.67
PCSK4-208ENST00000588671 IL25Q9H293 177 aa19.25■□□□□ 0.67
PCSK4-208ENST00000588671 A1CFQ9NQ94 594 aaKnown RBP19.25■□□□□ 0.67
PCSK4-208ENST00000588671 XPNPEP3Q9NQH7 507 aa19.25■□□□□ 0.67
PCSK4-208ENST00000588671 RBM8AQ9Y5S9 174 aaKnown RBP19.25■□□□□ 0.67
PCSK4-208ENST00000588671 E7EWF7 191 aa19.24■□□□□ 0.67
PCSK4-208ENST00000588671 ACVR2BQ13705 512 aa19.24■□□□□ 0.67
PCSK4-208ENST00000588671 WTAPQ15007 396 aa19.24■□□□□ 0.67
PCSK4-208ENST00000588671 CATIPQ7Z7H3 387 aa19.24■□□□□ 0.67
PCSK4-208ENST00000588671 MCF2L2Q86YR7 1114 aa19.24■□□□□ 0.67
PCSK4-208ENST00000588671 ANO2Q9NQ90 1003 aa19.24■□□□□ 0.67
PCSK4-208ENST00000588671 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.24■□□□□ 0.67
PCSK4-208ENST00000588671 CYP39A1Q9NYL5 469 aa19.24■□□□□ 0.67
PCSK4-208ENST00000588671 ZHX1Q9UKY1 873 aaPredicted RBP19.24■□□□□ 0.67
PCSK4-208ENST00000588671 ZNF865P0CJ78 1059 aaPredicted RBP19.23■□□□□ 0.67
PCSK4-208ENST00000588671 COL6A1P12109 1028 aa19.23■□□□□ 0.67
PCSK4-208ENST00000588671 FXR1P51114 621 aaKnown RBP eCLIP19.23■□□□□ 0.67
PCSK4-208ENST00000588671 SNAP25P60880 206 aa19.23■□□□□ 0.67
PCSK4-208ENST00000588671 ARMCX2Q7L311 632 aa19.23■□□□□ 0.67
PCSK4-208ENST00000588671 FAM133AQ8N9E0 248 aa19.23■□□□□ 0.67
PCSK4-208ENST00000588671 PRKAG2Q9UGJ0 569 aa19.23■□□□□ 0.67
PCSK4-208ENST00000588671 PTPDC1A2A3K4 754 aa19.22■□□□□ 0.67
PCSK4-208ENST00000588671 DUSP11O75319 330 aaKnown RBP19.22■□□□□ 0.67
PCSK4-208ENST00000588671 CDC45O75419 566 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms