RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 PPIL2Q13356 520 aa9.78□□□□□ -0.84
NPC1-204ENST00000586718 STK38Q15208 465 aa9.78□□□□□ -0.84
NPC1-204ENST00000586718 SF3A1Q15459 793 aaKnown RBP9.78□□□□□ -0.84
NPC1-204ENST00000586718 SLC35G1Q2M3R5 365 aa9.78□□□□□ -0.84
NPC1-204ENST00000586718 MCTP2Q6DN12 878 aa9.78□□□□□ -0.84
NPC1-204ENST00000586718 CHADLQ6NUI6 762 aa9.78□□□□□ -0.84
NPC1-204ENST00000586718 SAMD1Q6SPF0 538 aaPredicted RBP9.78□□□□□ -0.84
NPC1-204ENST00000586718 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.78□□□□□ -0.84
NPC1-204ENST00000586718 KRT25Q7Z3Z0 450 aa9.78□□□□□ -0.84
NPC1-204ENST00000586718 FBXO11Q86XK2 927 aa9.78□□□□□ -0.84
NPC1-204ENST00000586718 TEX2Q8IWB9 1127 aa9.78□□□□□ -0.84
NPC1-204ENST00000586718 JMYQ8N9B5 988 aa9.78□□□□□ -0.84
NPC1-204ENST00000586718 KCNG4Q8TDN1 519 aa9.78□□□□□ -0.84
NPC1-204ENST00000586718 MTMR8Q96EF0 704 aa9.78□□□□□ -0.84
NPC1-204ENST00000586718 OTUD5Q96G74 571 aa9.78□□□□□ -0.84
NPC1-204ENST00000586718 RANBP17Q9H2T7 1088 aaKnown RBP9.78□□□□□ -0.84
NPC1-204ENST00000586718 RPAP3Q9H6T3 665 aaPredicted RBP9.78□□□□□ -0.84
NPC1-204ENST00000586718 NMRK2Q9NPI5 230 aa9.78□□□□□ -0.84
NPC1-204ENST00000586718 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.78□□□□□ -0.84
NPC1-204ENST00000586718 SMCO2A6NFE2 343 aa9.77□□□□□ -0.85
NPC1-204ENST00000586718 ZBED4O75132 1171 aa9.77□□□□□ -0.85
NPC1-204ENST00000586718 PRPF40AO75400 957 aaKnown RBP9.77□□□□□ -0.85
NPC1-204ENST00000586718 YEATS4O95619 227 aa9.77□□□□□ -0.85
NPC1-204ENST00000586718 TRAPPC10P48553 1259 aa9.77□□□□□ -0.85
NPC1-204ENST00000586718 MRPL12P52815 198 aaKnown RBP9.77□□□□□ -0.85
NPC1-204ENST00000586718 NR5A1Q13285 461 aa9.77□□□□□ -0.85
NPC1-204ENST00000586718 PABPC4Q13310 644 aaKnown RBP eCLIP9.77□□□□□ -0.85
NPC1-204ENST00000586718 FAM173BQ6P4H8 233 aa9.77□□□□□ -0.85
NPC1-204ENST00000586718 C2orf69Q8N8R5 385 aa9.77□□□□□ -0.85
NPC1-204ENST00000586718 PRPF38AQ8NAV1 312 aaKnown RBP9.77□□□□□ -0.85
NPC1-204ENST00000586718 ZMYND12Q9H0C1 365 aa9.77□□□□□ -0.85
NPC1-204ENST00000586718 GBA2Q9HCG7 927 aaPredicted RBP9.77□□□□□ -0.85
NPC1-204ENST00000586718 POLR3EQ9NVU0 708 aa9.77□□□□□ -0.85
NPC1-204ENST00000586718 PCDHA1Q9Y5I3 950 aa9.77□□□□□ -0.85
NPC1-204ENST00000586718 ABCB11O95342 1321 aa9.77□□□□□ -0.85
NPC1-204ENST00000586718 MYPNQ86TC9 1320 aa9.77□□□□□ -0.85
NPC1-204ENST00000586718 USP17L15C9J2P7 530 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 USP17L13C9JLJ4 530 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 USP17L11C9JVI0 530 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 USP17L18D6R9N7 530 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 USP17L22D6RA61 530 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 USP17L17D6RBQ6 530 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 USP17L19D6RCP7 530 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 USP17L20D6RJB6 530 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 TRAF5O00463 557 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 CXCL11O14625 94 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 CELF2O95319 508 aaKnown RBP9.76□□□□□ -0.85
NPC1-204ENST00000586718 UBE2HP62256 183 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 CEBPZQ03701 1054 aaKnown RBP9.76□□□□□ -0.85
NPC1-204ENST00000586718 USP17L24Q0WX57 530 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 NONOQ15233 471 aaKnown RBP eCLIP9.76□□□□□ -0.85
NPC1-204ENST00000586718 USH1GQ495M9 461 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 SH3D19Q5HYK7 790 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 KIAA1755Q5JYT7 1200 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 ANO1Q5XXA6 986 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 TYW1BQ6NUM6 668 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 CCDC174Q6PII3 467 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 DLK2Q6UY11 383 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 GADL1Q6ZQY3 521 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 PIK3AP1Q6ZUJ8 805 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 PROCA1Q8NCQ7 364 aaPredicted RBP9.76□□□□□ -0.85
NPC1-204ENST00000586718 OXER1Q8TDS5 423 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 LEO1Q8WVC0 666 aaPredicted RBP9.76□□□□□ -0.85
NPC1-204ENST00000586718 COA7Q96BR5 231 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 USP28Q96RU2 1077 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 ANP32EQ9BTT0 268 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 EHMT1Q9H9B1 1298 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 GPBP1L1Q9HC44 474 aaPredicted RBP9.76□□□□□ -0.85
NPC1-204ENST00000586718 GDPD2Q9HCC8 539 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 RIC8AQ9NPQ8 531 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 EMILIN3Q9NT22 766 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 RTEL1Q9NZ71 1219 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 PPP1R9AQ9ULJ8 1098 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 MRPL11Q9Y3B7 192 aaKnown RBP9.76□□□□□ -0.85
NPC1-204ENST00000586718 AFG3L2Q9Y4W6 797 aa9.76□□□□□ -0.85
NPC1-204ENST00000586718 DDX49Q9Y6V7 483 aaKnown RBP9.76□□□□□ -0.85
NPC1-204ENST00000586718 COL11A1P12107 1806 aaPredicted RBP9.76□□□□□ -0.85
NPC1-204ENST00000586718 A0A0G2JLL6 359 aaPredicted RBP9.75□□□□□ -0.85
NPC1-204ENST00000586718 ME1P48163 572 aa9.75□□□□□ -0.85
NPC1-204ENST00000586718 NASPP49321 788 aaPredicted RBP9.75□□□□□ -0.85
NPC1-204ENST00000586718 IRX3P78415 501 aaPredicted RBP9.75□□□□□ -0.85
NPC1-204ENST00000586718 AP3B2Q13367 1082 aa9.75□□□□□ -0.85
NPC1-204ENST00000586718 TTC38Q5R3I4 469 aa9.75□□□□□ -0.85
NPC1-204ENST00000586718 LDLRAD1Q5T700 205 aa9.75□□□□□ -0.85
NPC1-204ENST00000586718 PRRT2Q7Z6L0 340 aaPredicted RBP9.75□□□□□ -0.85
NPC1-204ENST00000586718 SYAP1Q96A49 352 aaPredicted RBP9.75□□□□□ -0.85
NPC1-204ENST00000586718 OPTNQ96CV9 577 aa9.75□□□□□ -0.85
NPC1-204ENST00000586718 SHISA4Q96DD7 197 aa9.75□□□□□ -0.85
NPC1-204ENST00000586718 SLC10A4Q96EP9 437 aa9.75□□□□□ -0.85
NPC1-204ENST00000586718 CHAMP1Q96JM3 812 aa9.75□□□□□ -0.85
NPC1-204ENST00000586718 CLMNQ96JQ2 1002 aa9.75□□□□□ -0.85
NPC1-204ENST00000586718 NAP1L4Q99733 375 aaKnown RBP9.75□□□□□ -0.85
NPC1-204ENST00000586718 PSTPIP2Q9H939 334 aa9.75□□□□□ -0.85
NPC1-204ENST00000586718 LMBRD1Q9NUN5 540 aa9.75□□□□□ -0.85
NPC1-204ENST00000586718 FBXO28Q9NVF7 368 aa9.75□□□□□ -0.85
NPC1-204ENST00000586718 TFIP11Q9UBB9 837 aaKnown RBP9.75□□□□□ -0.85
NPC1-204ENST00000586718 CCPG1Q9ULG6 757 aa9.75□□□□□ -0.85
NPC1-204ENST00000586718 SPDYE3A6NKU9 549 aa9.74□□□□□ -0.85
NPC1-204ENST00000586718 SPTLC2O15270 562 aa9.74□□□□□ -0.85
NPC1-204ENST00000586718 TRAK2O60296 914 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms