RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 RBM27Q9P2N5 1060 aaKnown RBP16.92■□□□□ 0.3
SCAMP4-209ENST00000585335 TPCN1Q9ULQ1 816 aa16.92■□□□□ 0.3
SCAMP4-209ENST00000585335 HPS5Q9UPZ3 1129 aa16.92■□□□□ 0.3
SCAMP4-209ENST00000585335 FOXN1O15353 648 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 CNMDO75829 334 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 PLEKHA8P1O95397 391 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 ICAM1P05362 532 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 SLC4A3P48751 1232 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 FCGRTP55899 365 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 CCT2P78371 535 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 AKAP17AQ02040 695 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 TKFCQ3LXA3 575 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 IFFO2Q5TF58 517 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 RIOX2Q8IUF8 465 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 SHCBP1Q8NEM2 672 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 REPS2Q8NFH8 660 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 CPVLQ9H3G5 476 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 MROH8Q9H579 483 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 JMJD4Q9H9V9 463 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 RAVER2Q9HCJ3 691 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 ZNF214Q9UL59 606 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 CCPG1Q9ULG6 757 aa16.91■□□□□ 0.3
SCAMP4-209ENST00000585335 ZBTB5O15062 677 aa16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 PFKFB2O60825 505 aa16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 HSPA8P11142 646 aaKnown RBP16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 SNAP25P60880 206 aa16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 LACTBP83111 547 aaPredicted RBP16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 WDR78Q5VTH9 848 aa16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 NCAPG2Q86XI2 1143 aa16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 HOMER1Q86YM7 354 aa16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 TRIM22Q8IYM9 498 aa16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 SRBD1Q8N5C6 995 aaKnown RBP16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 ZNF296Q8WUU4 475 aaPredicted RBP16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 MOV10L1Q9BXT6 1211 aaKnown RBP16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 FBXO40Q9UH90 709 aa16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 IVNS1ABPQ9Y6Y0 642 aa16.9■□□□□ 0.3
SCAMP4-209ENST00000585335 COL11A1P12107 1806 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-209ENST00000585335 PNMA6FA0A0J9YX94 578 aa16.89■□□□□ 0.29
SCAMP4-209ENST00000585335 FMNL1O95466 1100 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-209ENST00000585335 CDC27P30260 824 aa16.89■□□□□ 0.29
SCAMP4-209ENST00000585335 ADD1P35611 737 aaKnown RBP16.89■□□□□ 0.29
SCAMP4-209ENST00000585335 QRICH1Q2TAL8 776 aa16.89■□□□□ 0.29
SCAMP4-209ENST00000585335 FBXO11Q86XK2 927 aa16.89■□□□□ 0.29
SCAMP4-209ENST00000585335 CCDC82Q8N4S0 544 aa16.89■□□□□ 0.29
SCAMP4-209ENST00000585335 COA7Q96BR5 231 aa16.89■□□□□ 0.29
SCAMP4-209ENST00000585335 MTMR8Q96EF0 704 aa16.89■□□□□ 0.29
SCAMP4-209ENST00000585335 PIGSQ96S52 555 aa16.89■□□□□ 0.29
SCAMP4-209ENST00000585335 AMNQ9BXJ7 453 aa16.89■□□□□ 0.29
SCAMP4-209ENST00000585335 NCOA5Q9HCD5 579 aaKnown RBP16.89■□□□□ 0.29
SCAMP4-209ENST00000585335 TNPO2O14787 897 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 CYTH3O43739 400 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 GNRH1P01148 92 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 ALAS1P13196 640 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 IFNAR1P17181 557 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 HOXD10P28358 340 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 PSMC4P43686 418 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 ME3Q16798 604 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 Q3C1V9 767 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 POTEEQ6S8J3 1075 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 NBPF11Q86T75 865 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 CMTR1Q8N1G2 835 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 CHST13Q8NET6 341 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 PIBF1Q8WXW3 757 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 GTF3C6Q969F1 213 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 AGBL1Q96MI9 1066 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 FAM217BQ9NTX9 383 aaPredicted RBP16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 ABCB11O95342 1321 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 CNTNAP5Q8WYK1 1306 aa16.88■□□□□ 0.29
SCAMP4-209ENST00000585335 PEX10O60683 326 aa16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 ERCC3P19447 782 aa16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 LBX1P52954 281 aa16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 SSRP1Q08945 709 aaKnown RBP16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 SCRN1Q12765 414 aa16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 USH1GQ495M9 461 aa16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 PLEKHH3Q7Z736 793 aa16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 CD99L2Q8TCZ2 262 aa16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 SLC26A6Q9BXS9 759 aa16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 RNF26Q9BY78 433 aaPredicted RBP16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 PORCNQ9H237 461 aa16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 ACAD9Q9H845 621 aa16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 HOMER2Q9NSB8 354 aa16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 RNF146Q9NTX7 359 aa16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 MRPL11Q9Y3B7 192 aaKnown RBP16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 ZNF536O15090 1300 aa16.87■□□□□ 0.29
SCAMP4-209ENST00000585335 STRNO43815 780 aa16.86■□□□□ 0.29
SCAMP4-209ENST00000585335 FCER1AP12319 257 aa16.86■□□□□ 0.29
SCAMP4-209ENST00000585335 KCTD2Q14681 263 aa16.86■□□□□ 0.29
SCAMP4-209ENST00000585335 NECAB1Q8N987 351 aa16.86■□□□□ 0.29
SCAMP4-209ENST00000585335 SOCS4Q8WXH5 440 aa16.86■□□□□ 0.29
SCAMP4-209ENST00000585335 TRERF1Q96PN7 1200 aa16.86■□□□□ 0.29
SCAMP4-209ENST00000585335 EFCC1Q9HA90 598 aa16.86■□□□□ 0.29
SCAMP4-209ENST00000585335 PCDHA1Q9Y5I3 950 aa16.86■□□□□ 0.29
SCAMP4-209ENST00000585335 V9GY48 417 aaPredicted RBP16.86■□□□□ 0.29
SCAMP4-209ENST00000585335 hCG_1984214I3L0E3 225 aa16.85■□□□□ 0.29
SCAMP4-209ENST00000585335 PRPF3O43395 683 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-209ENST00000585335 ECM2O94769 699 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-209ENST00000585335 LARGE1O95461 756 aa16.85■□□□□ 0.29
SCAMP4-209ENST00000585335 FUT2Q10981 343 aa16.85■□□□□ 0.29
SCAMP4-209ENST00000585335 SLC35G1Q2M3R5 365 aa16.85■□□□□ 0.29
SCAMP4-209ENST00000585335 GPR142Q7Z601 462 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms