RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453		H0Y8X5	98 aa		4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	PPM1B	O75688	479 aa		4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	GLI1	P08151	1106 aa		4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	NAT2	P11245	290 aa		4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	KIR2DL1	P43626	348 aa	Predicted RBP	4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	KIR2DL2	P43627	348 aa	Predicted RBP	4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	POU4F1	Q01851	419 aa		4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	SNX17	Q15036	470 aa		4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	TMEM67	Q5HYA8	995 aa		4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	RCC1L	Q96I51	464 aa	Known RBP	4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	NOL6	Q9H6R4	1146 aa	Known RBP	4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	SP110	Q9HB58	689 aa		4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	FAM53C	Q9NYF3	392 aa		4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	TNFRSF10D	Q9UBN6	386 aa		4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	SUSD2	Q9UGT4	822 aa		4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	EBF1	Q9UH73	591 aa		4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.87	□□□□□ -1.63
MSI2-215	ENST00000582453	NOP2	P46087	812 aa	Known RBP	4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	ERVFC1	P60507	584 aa		4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	FXN	Q16595	210 aa		4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	RTP2	Q5QGT7	225 aa		4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	LARP1B	Q659C4	914 aa	Known RBP	4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	ZPBP2	Q6X784	338 aa		4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	ADAT2	Q7Z6V5	191 aa	Known RBP	4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	FGD4	Q96M96	766 aa		4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	CDADC1	Q9BWV3	514 aa		4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	SLC12A9	Q9BXP2	914 aa		4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	ERVK13-1	Q9NX77	482 aa		4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	R3HCC1	Q9Y3T6	440 aa	Known RBP	4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	FGD5	Q6ZNL6	1462 aa		4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	BIVM-ERCC5	R4GMW8	1640 aa		4.86	□□□□□ -1.63
MSI2-215	ENST00000582453	ZNF503-AS2	A6NEH8	195 aa		4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	TXK	P42681	527 aa		4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	GRB10	Q13322	594 aa		4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	C6orf15	Q6UXA7	325 aa	Predicted RBP	4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	FAM178B	Q8IXR5	827 aa		4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	ARHGEF39	Q8N4T4	335 aa		4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	ADCY4	Q8NFM4	1077 aa		4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	HHIPL1	Q96JK4	782 aa		4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	ZDHHC15	Q96MV8	337 aa		4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	APBA2	Q99767	749 aa		4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	AP5S1	Q9NUS5	200 aa		4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	CGGBP1	Q9UFW8	167 aa	Predicted RBP	4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	SUGT1	Q9Y2Z0	365 aa		4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	SOGA1	O94964	1423 aa		4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	ABCA10	Q8WWZ4	1543 aa		4.85	□□□□□ -1.63
MSI2-215	ENST00000582453	TARBP1	Q13395	1621 aa	Known RBP	4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	SYNJ1	O43426	1573 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	FADS2P1	A8MWK0	482 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	NRDC	O43847	1150 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	USP2	O75604	605 aa	Predicted RBP	4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	DDAH1	O94760	285 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	STK10	O94804	968 aa	Known RBP	4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	CD3E	P07766	207 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	GSTM1	P09488	218 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	TRHR	P34981	398 aa	Predicted RBP	4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	PPP2R5D	Q14738	602 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	SLC14A2	Q15849	920 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	TIGD5	Q53EQ6	642 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	POMZP3	Q6PJE2	187 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	MPZL3	Q6UWV2	235 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	CYP2R1	Q6VVX0	501 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	CEP128	Q6ZU80	1094 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	ANKS3	Q6ZW76	656 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	RNF32	Q9H0A6	362 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	C19orf44	Q9H6X5	657 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	CWC22	Q9HCG8	908 aa	Known RBP	4.84	□□□□□ -1.63
MSI2-215	ENST00000582453	APEX2	Q9UBZ4	518 aa		4.84	□□□□□ -1.63
MSI2-215	ENST00000582453		A0A1W2PQ45	241 aa	Predicted RBP	4.83	□□□□□ -1.64
MSI2-215	ENST00000582453		A0A1W2PQY0	241 aa		4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	NOTO	A8MTQ0	251 aa		4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	FGF10	O15520	208 aa	Predicted RBP	4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	KLF4	O43474	513 aa		4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	PSPN	O60542	156 aa		4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	RTP1	P59025	263 aa		4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	AMPD2	Q01433	879 aa		4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	RCSD1	Q6JBY9	416 aa		4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	NAT16	Q8N8M0	369 aa		4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	BVES	Q8NE79	360 aa		4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	LIN37	Q96GY3	246 aa	Predicted RBP	4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	FCRL3	Q96P31	734 aa	Predicted RBP	4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	KRTAP4-8	Q9BYQ9	185 aa		4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	TANGO6	Q9C0B7	1094 aa		4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	SLC6A17	Q9H1V8	727 aa		4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	4.83	□□□□□ -1.64	8e-8	■■□□□ 12.7
MSI2-215	ENST00000582453	GPR160	Q9UJ42	338 aa		4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.83	□□□□□ -1.64
MSI2-215	ENST00000582453	LRRC10B	A6NIK2	292 aa		4.82	□□□□□ -1.64
MSI2-215	ENST00000582453	WTIP	A6NIX2	430 aa	Predicted RBP	4.82	□□□□□ -1.64
MSI2-215	ENST00000582453		B2RBV5	119 aa		4.82	□□□□□ -1.64
MSI2-215	ENST00000582453	NOP56	O00567	594 aa	Known RBP	4.82	□□□□□ -1.64
MSI2-215	ENST00000582453	AURKA	O14965	403 aa		4.82	□□□□□ -1.64
MSI2-215	ENST00000582453	SUSD5	O60279	629 aa		4.82	□□□□□ -1.64
MSI2-215	ENST00000582453	IFNGR1	P15260	489 aa		4.82	□□□□□ -1.64
MSI2-215	ENST00000582453	ATP2B1	P20020	1258 aa		4.82	□□□□□ -1.64
MSI2-215	ENST00000582453	CEBPA	P49715	358 aa	Predicted RBP	4.82	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms