RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 PPP4R3BQ5MIZ7 849 aa12.25□□□□□ -0.45
GGA3-210ENST00000580799 MFSD5Q6N075 450 aa12.25□□□□□ -0.45
GGA3-210ENST00000580799 STK11IPQ8N1F8 1099 aa12.25□□□□□ -0.45
GGA3-210ENST00000580799 NACAP1Q9BZK3 213 aa12.25□□□□□ -0.45
GGA3-210ENST00000580799 DCTPP1Q9H773 170 aa12.25□□□□□ -0.45
GGA3-210ENST00000580799 RAVER2Q9HCJ3 691 aaKnown RBP12.25□□□□□ -0.45
GGA3-210ENST00000580799 A0A0U1RQG5 324 aaPredicted RBP12.24□□□□□ -0.45
GGA3-210ENST00000580799 PATL2C9JE40 543 aaKnown RBP12.24□□□□□ -0.45
GGA3-210ENST00000580799 PRDM1O75626 825 aa12.24□□□□□ -0.45
GGA3-210ENST00000580799 ASGR1P07306 291 aa12.24□□□□□ -0.45
GGA3-210ENST00000580799 SLC3A2P08195 630 aaKnown RBP12.24□□□□□ -0.45
GGA3-210ENST00000580799 TSPY3P0CV98 308 aa12.24□□□□□ -0.45
GGA3-210ENST00000580799 TSPY8P0CW00 308 aa12.24□□□□□ -0.45
GGA3-210ENST00000580799 BMP3P12645 472 aa12.24□□□□□ -0.45
GGA3-210ENST00000580799 DNAJB2P25686 324 aa12.24□□□□□ -0.45
GGA3-210ENST00000580799 STAT2P52630 851 aa12.24□□□□□ -0.45
GGA3-210ENST00000580799 NKX3-2P78367 333 aa12.24□□□□□ -0.45
GGA3-210ENST00000580799 PPIGQ13427 754 aaKnown RBP eCLIP12.24□□□□□ -0.455e-7■■■□□ 18.8
GGA3-210ENST00000580799 GNASQ5JWF2 1037 aa12.24□□□□□ -0.45
GGA3-210ENST00000580799 ARMCX2Q7L311 632 aa12.24□□□□□ -0.45
GGA3-210ENST00000580799 IFNL3Q8IZI9 196 aa12.24□□□□□ -0.45
GGA3-210ENST00000580799 NEDD1Q8NHV4 660 aa12.24□□□□□ -0.45
GGA3-210ENST00000580799 TTC41PQ6P2S7 1318 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 MYADML2A6NDP7 307 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 M0R2C6 588 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 ARVCFO00192 962 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 TLR3O15455 904 aaKnown RBP12.23□□□□□ -0.45
GGA3-210ENST00000580799 ADCY6O43306 1168 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 C20orf194Q5TEA3 1177 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 SLFN13Q68D06 897 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 FAM160B2Q86V87 743 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 CCDC144CPQ8IYA2 1237 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 LRRC47Q8N1G4 583 aaKnown RBP12.23□□□□□ -0.45
GGA3-210ENST00000580799 TMEM199Q8N511 208 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 CHURC1Q8WUH1 139 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 SYMPKQ92797 1274 aaKnown RBP12.23□□□□□ -0.45
GGA3-210ENST00000580799 VTI1AQ96AJ9 217 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 GMCL1Q96IK5 515 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 FGD4Q96M96 766 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.23□□□□□ -0.451e-6■■■□□ 16.8
GGA3-210ENST00000580799 ACAD9Q9H845 621 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 MCM3APO60318 1980 aa12.23□□□□□ -0.45
GGA3-210ENST00000580799 ASB14A6NK59 587 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 TMEM232C9JQI7 657 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 ERC2O15083 957 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 PLA2G6O60733 806 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 CABYRO75952 493 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 TNFAIP2Q03169 654 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 TKFCQ3LXA3 575 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 PSRC1Q6PGN9 363 aaPredicted RBP12.22□□□□□ -0.45
GGA3-210ENST00000580799 CCDC129Q6ZRS4 1044 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 FAM126BQ8IXS8 530 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 FAM133AQ8N9E0 248 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 SEZ6LQ9BYH1 1024 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 KATNBL1Q9H079 304 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 NAPBQ9H115 298 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 HOMER2Q9NSB8 354 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 LRRC37A2A6NM11 1700 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 EYSQ5T1H1 3165 aa12.22□□□□□ -0.45
GGA3-210ENST00000580799 CDH23Q9H251 3354 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 CTAGE5O15320 804 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 SLC1A4P43007 532 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 TFAP4Q01664 338 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 CNTN2Q02246 1040 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 PPARAQ07869 468 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 IKQ13123 557 aaPredicted RBP12.21□□□□□ -0.45
GGA3-210ENST00000580799 GRIN2CQ14957 1233 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 TMEM240Q5SV17 173 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 RASIP1Q5U651 963 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 TSHZ3Q63HK5 1081 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 STAG1Q8WVM7 1258 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 TIFAQ96CG3 184 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 ZNF576Q9H609 170 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 A1CFQ9NQ94 594 aaKnown RBP12.21□□□□□ -0.45
GGA3-210ENST00000580799 RNF146Q9NTX7 359 aa12.21□□□□□ -0.45
GGA3-210ENST00000580799 ISY1Q9ULR0 285 aaKnown RBP12.21□□□□□ -0.45
GGA3-210ENST00000580799 ZNF536O15090 1300 aa12.2□□□□□ -0.46
GGA3-210ENST00000580799 CD4P01730 458 aa12.2□□□□□ -0.46
GGA3-210ENST00000580799 CSF2RAP15509 400 aa12.2□□□□□ -0.46
GGA3-210ENST00000580799 IRX5P78411 483 aaPredicted RBP12.2□□□□□ -0.46
GGA3-210ENST00000580799 ZMYM1Q5SVZ6 1142 aa12.2□□□□□ -0.46
GGA3-210ENST00000580799 C16orf59Q7L2K0 433 aa12.2□□□□□ -0.46
GGA3-210ENST00000580799 SLC43A3Q8NBI5 491 aa12.2□□□□□ -0.46
GGA3-210ENST00000580799 TRERF1Q96PN7 1200 aa12.2□□□□□ -0.46
GGA3-210ENST00000580799 MTIF3Q9H2K0 278 aaKnown RBP12.2□□□□□ -0.46
GGA3-210ENST00000580799 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
GGA3-210ENST00000580799 ZEB2O60315 1214 aa12.19□□□□□ -0.46
GGA3-210ENST00000580799 FSCN1Q16658 493 aaKnown RBP12.19□□□□□ -0.46
GGA3-210ENST00000580799 RCSD1Q6JBY9 416 aa12.19□□□□□ -0.46
GGA3-210ENST00000580799 ZNF365Q70YC5 407 aa12.19□□□□□ -0.46
GGA3-210ENST00000580799 NOL8Q76FK4 1167 aaKnown RBP12.19□□□□□ -0.46
GGA3-210ENST00000580799 TLK2Q86UE8 772 aa12.19□□□□□ -0.46
GGA3-210ENST00000580799 PI4K2BQ8TCG2 481 aa12.19□□□□□ -0.46
GGA3-210ENST00000580799 AGBL1Q96MI9 1066 aa12.19□□□□□ -0.46
GGA3-210ENST00000580799 SEC62Q99442 399 aaKnown RBP12.19□□□□□ -0.46
GGA3-210ENST00000580799 GAS2L1Q99501 681 aaPredicted RBP12.19□□□□□ -0.46
GGA3-210ENST00000580799 FSD1Q9BTV5 496 aa12.19□□□□□ -0.46
GGA3-210ENST00000580799 PPP1R12CQ9BZL4 782 aa12.19□□□□□ -0.46
GGA3-210ENST00000580799 AP5M1Q9H0R1 490 aa12.19□□□□□ -0.46
GGA3-210ENST00000580799 IL23AQ9NPF7 189 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms