RNA–Protein interactions for RNA: ENST00000580157.2

CDH19-205, Transcript of cadherin 19, humanhuman

TSL 4

Gene CDH19, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-205ENST00000580157 SUSD2Q9UGT4 822 aa4.92□□□□□ -1.62
CDH19-205ENST00000580157 GPR55Q9Y2T6 319 aaPredicted RBP4.92□□□□□ -1.62
CDH19-205ENST00000580157 TAF6LQ9Y6J9 622 aa4.92□□□□□ -1.62
CDH19-205ENST00000580157 C1QTNF3-AMACRE9PGA6 284 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 DNAJA2O60884 412 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 EIF4A3P38919 411 aaKnown RBP4.91□□□□□ -1.62
CDH19-205ENST00000580157 ARL4AP40617 200 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 ZNF200P98182 395 aaPredicted RBP4.91□□□□□ -1.62
CDH19-205ENST00000580157 FAM160A1Q05DH4 1040 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 TMEM62Q0P6H9 643 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 LAPTM5Q13571 262 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 PLEKHN1Q494U1 663 aaPredicted RBP4.91□□□□□ -1.62
CDH19-205ENST00000580157 NLGN1Q8N2Q7 840 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 ZNF655Q8N720 491 aaPredicted RBP4.91□□□□□ -1.62
CDH19-205ENST00000580157 FNIP1Q8TF40 1166 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 ZNF526Q8TF50 670 aaPredicted RBP4.91□□□□□ -1.62
CDH19-205ENST00000580157 CCDC74BQ96LY2 380 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 RBM15Q96T37 977 aaKnown RBP eCLIP4.91□□□□□ -1.62
CDH19-205ENST00000580157 KIF2CQ99661 725 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 KCNQ5Q9NR82 932 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 TNFRSF10DQ9UBN6 386 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 KLHL3Q9UH77 587 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 GGT7Q9UJ14 662 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 PLA2G2DQ9UNK4 145 aa4.91□□□□□ -1.62
CDH19-205ENST00000580157 SUPT16HQ9Y5B9 1047 aaKnown RBP4.91□□□□□ -1.62
CDH19-205ENST00000580157 SSU72P8A0A1W2PR75 194 aa4.9□□□□□ -1.63
CDH19-205ENST00000580157 WTIPA6NIX2 430 aaPredicted RBP4.9□□□□□ -1.63
CDH19-205ENST00000580157 MSL3P1P0C860 447 aa4.9□□□□□ -1.63
CDH19-205ENST00000580157 GARTP22102 1010 aa4.9□□□□□ -1.63
CDH19-205ENST00000580157 CNR2P34972 360 aa4.9□□□□□ -1.63
CDH19-205ENST00000580157 CYP4F8P98187 520 aa4.9□□□□□ -1.63
CDH19-205ENST00000580157 SNW1Q13573 536 aaKnown RBP4.9□□□□□ -1.63
CDH19-205ENST00000580157 CWF19L2Q2TBE0 894 aaKnown RBP4.9□□□□□ -1.63
CDH19-205ENST00000580157 FAM196AQ6ZSG2 479 aa4.9□□□□□ -1.63
CDH19-205ENST00000580157 SLCO6A1Q86UG4 719 aa4.9□□□□□ -1.63
CDH19-205ENST00000580157 FCRL2Q96LA5 508 aaPredicted RBP4.9□□□□□ -1.63
CDH19-205ENST00000580157 PRDM14Q9GZV8 571 aa4.9□□□□□ -1.63
CDH19-205ENST00000580157 COPRSQ9NQ92 184 aa4.9□□□□□ -1.63
CDH19-205ENST00000580157 METTL5Q9NRN9 209 aaKnown RBP4.9□□□□□ -1.63
CDH19-205ENST00000580157 REV1Q9UBZ9 1251 aa4.9□□□□□ -1.63
CDH19-205ENST00000580157 PRR36Q9H6K5 1346 aa4.9□□□□□ -1.63
CDH19-205ENST00000580157 NOBOXO60393 691 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 GREM1O60565 184 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 SLPIP03973 132 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 ZNF20P17024 532 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 FBLN1P23142 703 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 VAMP1P23763 118 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 ZNF76P36508 570 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 HMGA2P52926 109 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 DLX2Q07687 328 aaPredicted RBP4.89□□□□□ -1.63
CDH19-205ENST00000580157 CPZQ66K79 652 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 FBXL19Q6PCT2 694 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 REC114Q7Z4M0 266 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 SAPCD2Q86UD0 394 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 MENTQ9BUN1 341 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 LRRC3Q9BY71 257 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 BACH2Q9BYV9 841 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 ERVK13-1Q9NX77 482 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 ACSL6Q9UKU0 697 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 MINPP1Q9UNW1 487 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 HCFC2Q9Y5Z7 792 aa4.89□□□□□ -1.63
CDH19-205ENST00000580157 PRAMEF1O95521 474 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 ATF2P15336 505 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 PFKLP17858 780 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 MAPKAPK2P49137 400 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 HTRA3P83110 453 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 FOXO4P98177 505 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 MLECQ14165 292 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 NBPF9Q3BBW0 867 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 LDLRAD1Q5T700 205 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 PHACTR4Q8IZ21 702 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 NUP43Q8NFH3 380 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 ZNF296Q8WUU4 475 aaPredicted RBP4.88□□□□□ -1.63
CDH19-205ENST00000580157 C1QTNF3Q9BXJ4 246 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 LNPKQ9C0E8 428 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 PODXL2Q9NZ53 605 aa4.88□□□□□ -1.63
CDH19-205ENST00000580157 POLR3KQ9Y2Y1 108 aaPredicted RBP4.88□□□□□ -1.63
CDH19-205ENST00000580157 SH3D21A4FU49 640 aa4.87□□□□□ -1.63
CDH19-205ENST00000580157 HTR3BO95264 441 aa4.87□□□□□ -1.63
CDH19-205ENST00000580157 C6P13671 934 aa4.87□□□□□ -1.63
CDH19-205ENST00000580157 ZC3H14Q6PJT7 736 aaKnown RBP4.87□□□□□ -1.63
CDH19-205ENST00000580157 Q8N1X5 172 aa4.87□□□□□ -1.63
CDH19-205ENST00000580157 FBXO27Q8NI29 283 aa4.87□□□□□ -1.63
CDH19-205ENST00000580157 RNF34Q969K3 372 aa4.87□□□□□ -1.63
CDH19-205ENST00000580157 C8orf49Q96NF6 230 aa4.87□□□□□ -1.63
CDH19-205ENST00000580157 MRIQ9BWK5 157 aa4.87□□□□□ -1.63
CDH19-205ENST00000580157 IMPACTQ9P2X3 320 aa4.87□□□□□ -1.63
CDH19-205ENST00000580157 A0A1W2PQ45 241 aaPredicted RBP4.86□□□□□ -1.63
CDH19-205ENST00000580157 A0A1W2PQY0 241 aa4.86□□□□□ -1.63
CDH19-205ENST00000580157 TLR3O15455 904 aaKnown RBP4.86□□□□□ -1.63
CDH19-205ENST00000580157 UBOX5O94941 541 aa4.86□□□□□ -1.63
CDH19-205ENST00000580157 GBP1P32455 592 aa4.86□□□□□ -1.63
CDH19-205ENST00000580157 FANCCQ00597 558 aa4.86□□□□□ -1.63
CDH19-205ENST00000580157 TARBP2Q15633 366 aaKnown RBP4.86□□□□□ -1.63
CDH19-205ENST00000580157 TMEM52Q8NDY8 209 aa4.86□□□□□ -1.63
CDH19-205ENST00000580157 NT5C1AQ9BXI3 368 aa4.86□□□□□ -1.63
CDH19-205ENST00000580157 ADAMTS1Q9UHI8 967 aa4.86□□□□□ -1.63
CDH19-205ENST00000580157 CCDC9Q9Y3X0 531 aaKnown RBP4.86□□□□□ -1.63
CDH19-205ENST00000580157 PMF1-BGLAPU3KQ54 211 aa4.86□□□□□ -1.63
CDH19-205ENST00000580157 SCAMP3O14828 347 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms