RNA–Protein interactions for RNA: ENST00000578446.1

USP22-208, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 3

Gene USP22, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-208ENST00000578446 PLS1Q14651 629 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 QRICH1Q2TAL8 776 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 HEATR3Q7Z4Q2 680 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 CPXCR1Q8N123 301 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 NSUN7Q8NE18 718 aaKnown RBP12.34□□□□□ -0.43
USP22-208ENST00000578446 DDX11Q96FC9 970 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 TEX13BQ9BXU2 312 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 RAVER2Q9HCJ3 691 aaKnown RBP12.34□□□□□ -0.43
USP22-208ENST00000578446 CCPG1Q9ULG6 757 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 ADAMTS5Q9UNA0 930 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 RABGAP1Q9Y3P9 1069 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.34□□□□□ -0.43
USP22-208ENST00000578446 STK36Q9NRP7 1315 aa12.34□□□□□ -0.43
USP22-208ENST00000578446 PRPF3O43395 683 aaKnown RBP12.33□□□□□ -0.44
USP22-208ENST00000578446 CA12O43570 354 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 DTNBO60941 627 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 DEXIO95424 95 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 ICAM1P05362 532 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 SLC4A3P48751 1232 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 OAZ1P54368 228 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 HMGN5P82970 282 aaKnown RBP12.33□□□□□ -0.44
USP22-208ENST00000578446 MAP2K1Q02750 393 aaPredicted RBP12.33□□□□□ -0.44
USP22-208ENST00000578446 TRAF1Q13077 416 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 TMEM132BQ14DG7 1078 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 USH1GQ495M9 461 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 SNRNP48Q6IEG0 339 aaKnown RBP12.33□□□□□ -0.44
USP22-208ENST00000578446 FBXO11Q86XK2 927 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 ANKRD13CQ8N6S4 541 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 WASF1Q92558 559 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 MTMR8Q96EF0 704 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 BEGAINQ9BUH8 593 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 AMNQ9BXJ7 453 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 ORC3Q9UBD5 711 aaPredicted RBP12.33□□□□□ -0.44
USP22-208ENST00000578446 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.44
USP22-208ENST00000578446 CPA4Q9UI42 421 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 PNMA2Q9UL42 364 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 SMC3Q9UQE7 1217 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 KIF3AQ9Y496 699 aa12.33□□□□□ -0.44
USP22-208ENST00000578446 TLR2O60603 784 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 TRPA1O75762 1119 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 SCG2P13521 617 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 ERVK-9P63128 1117 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 ERVK-24P63145 666 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 CCNA1P78396 465 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 PFKFB3Q16875 520 aaPredicted RBP12.32□□□□□ -0.44
USP22-208ENST00000578446 FAM110CQ1W6H9 321 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 FAM184AQ8NB25 1140 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 REPS2Q8NFH8 660 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 GPRC5AQ8NFJ5 357 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 GPKOWQ92917 476 aaPredicted RBP eCLIP12.32□□□□□ -0.444e-6■□□□□ 10.4
USP22-208ENST00000578446 AGBL1Q96MI9 1066 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 SPATC1LQ9H0A9 340 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 TXNRD2Q9NNW7 524 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 HOMER2Q9NSB8 354 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 RNF186Q9NXI6 227 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 BTBD7Q9P203 1132 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 RBPJLQ9UBG7 517 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 ZNF214Q9UL59 606 aaPredicted RBP12.32□□□□□ -0.44
USP22-208ENST00000578446 ADGRA2Q96PE1 1338 aa12.32□□□□□ -0.44
USP22-208ENST00000578446 hCG_1984214I3L0E3 225 aa12.31□□□□□ -0.44
USP22-208ENST00000578446 ATP2A1O14983 1001 aa12.31□□□□□ -0.44
USP22-208ENST00000578446 PEX10O60683 326 aa12.31□□□□□ -0.44
USP22-208ENST00000578446 PPP1R11O60927 126 aaPredicted RBP12.31□□□□□ -0.44
USP22-208ENST00000578446 CNMDO75829 334 aa12.31□□□□□ -0.44
USP22-208ENST00000578446 TAL1P17542 331 aaPredicted RBP12.31□□□□□ -0.44
USP22-208ENST00000578446 STAT3P40763 770 aa12.31□□□□□ -0.44
USP22-208ENST00000578446 WWC2Q6AWC2 1192 aa12.31□□□□□ -0.44
USP22-208ENST00000578446 POTEEQ6S8J3 1075 aa12.31□□□□□ -0.44
USP22-208ENST00000578446 CCAR1Q8IX12 1150 aaKnown RBP12.31□□□□□ -0.44
USP22-208ENST00000578446 DNAJC5GQ8N7S2 189 aa12.31□□□□□ -0.44
USP22-208ENST00000578446 ZNF713Q8N859 430 aaPredicted RBP12.31□□□□□ -0.44
USP22-208ENST00000578446 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
USP22-208ENST00000578446 INTS4Q96HW7 963 aaKnown RBP12.31□□□□□ -0.44
USP22-208ENST00000578446 CWC22Q9HCG8 908 aaKnown RBP12.31□□□□□ -0.44
USP22-208ENST00000578446 MORF4L1Q9UBU8 362 aa12.31□□□□□ -0.44
USP22-208ENST00000578446 PCDHA1Q9Y5I3 950 aa12.31□□□□□ -0.44
USP22-208ENST00000578446 ZNF536O15090 1300 aa12.31□□□□□ -0.44
USP22-208ENST00000578446 A0A0G2JMZ2 1700 aa12.31□□□□□ -0.44
USP22-208ENST00000578446 TBC1D8O95759 1140 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 BCRP11274 1271 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 ALAS1P13196 640 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 XBP1P17861 261 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 GJB2P29033 226 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 COPB2P35606 906 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 NAPAP54920 295 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 TRIM29Q14134 588 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 PKN1Q16512 942 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 TKFCQ3LXA3 575 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 WDR78Q5VTH9 848 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 PPP1R18Q6NYC8 613 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 NCAPG2Q86XI2 1143 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 RIOX2Q8IUF8 465 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 CCDC12Q8WUD4 166 aaPredicted RBP12.3□□□□□ -0.44
USP22-208ENST00000578446 ALG1Q9BT22 464 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 MOV10L1Q9BXT6 1211 aaKnown RBP12.3□□□□□ -0.44
USP22-208ENST00000578446 RNF146Q9NTX7 359 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 SAGE1Q9NXZ1 904 aa12.3□□□□□ -0.44
USP22-208ENST00000578446 BARHL2Q9NY43 387 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms