RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 IRF5Q13568 498 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 PLS1Q14651 629 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 RABEP1Q15276 862 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 TTBK2Q6IQ55 1244 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 TRMT44Q8IYL2 757 aaKnown RBP14.38□□□□□ -0.11
RARA-208ENST00000577646 ADGRF4Q8IZF3 695 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 SAMD3Q8N6K7 520 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 NUP133Q8WUM0 1156 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 SOCS4Q8WXH5 440 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 MTMR8Q96EF0 704 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 TRIM47Q96LD4 638 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 TBC1D32Q96NH3 1257 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 LRRC2Q9BYS8 371 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 CWC22Q9HCG8 908 aaKnown RBP14.38□□□□□ -0.11
RARA-208ENST00000577646 GPHNQ9NQX3 736 aaPredicted RBP14.38□□□□□ -0.11
RARA-208ENST00000577646 SLC5A4Q9NY91 659 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 RBM27Q9P2N5 1060 aaKnown RBP14.38□□□□□ -0.11
RARA-208ENST00000577646 SRRDQ9UH36 339 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 PTPN22Q9Y2R2 807 aa14.38□□□□□ -0.11
RARA-208ENST00000577646 DHX16O60231 1041 aaKnown RBP14.37□□□□□ -0.11
RARA-208ENST00000577646 GOLGA8HP0CJ92 632 aa14.37□□□□□ -0.11
RARA-208ENST00000577646 XRCC5P13010 732 aaKnown RBP14.37□□□□□ -0.11
RARA-208ENST00000577646 CPA1P15085 419 aa14.37□□□□□ -0.11
RARA-208ENST00000577646 PTPREP23469 700 aa14.37□□□□□ -0.11
RARA-208ENST00000577646 SLC16A2P36021 539 aa14.37□□□□□ -0.11
RARA-208ENST00000577646 NEK4P51957 841 aa14.37□□□□□ -0.11
RARA-208ENST00000577646 COL9A3Q14050 684 aaPredicted RBP14.37□□□□□ -0.11
RARA-208ENST00000577646 RTN1Q16799 776 aa14.37□□□□□ -0.11
RARA-208ENST00000577646 SNRNP48Q6IEG0 339 aaKnown RBP14.37□□□□□ -0.11
RARA-208ENST00000577646 STAG2Q8N3U4 1231 aa14.37□□□□□ -0.11
RARA-208ENST00000577646 RGS22Q8NE09 1264 aa14.37□□□□□ -0.11
RARA-208ENST00000577646 TCEANC2Q96MN5 208 aa14.37□□□□□ -0.11
RARA-208ENST00000577646 NUDT12Q9BQG2 462 aa14.37□□□□□ -0.11
RARA-208ENST00000577646 UPF3BQ9BZI7 483 aaKnown RBP14.37□□□□□ -0.11
RARA-208ENST00000577646 JMJD4Q9H9V9 463 aa14.37□□□□□ -0.11
RARA-208ENST00000577646 BRPF3Q9ULD4 1205 aa14.37□□□□□ -0.11
RARA-208ENST00000577646 PDE4DIPQ5VU43 2346 aa14.37□□□□□ -0.11
RARA-208ENST00000577646 PNMA6FA0A0J9YX94 578 aa14.36□□□□□ -0.11
RARA-208ENST00000577646 ZBTB5O15062 677 aa14.36□□□□□ -0.11
RARA-208ENST00000577646 FCER1AP12319 257 aa14.36□□□□□ -0.11
RARA-208ENST00000577646 ERCC3P19447 782 aa14.36□□□□□ -0.11
RARA-208ENST00000577646 METAP2P50579 478 aaKnown RBP eCLIP14.36□□□□□ -0.11
RARA-208ENST00000577646 SOX10P56693 466 aa14.36□□□□□ -0.11
RARA-208ENST00000577646 APOBRQ0VD83 1088 aa14.36□□□□□ -0.11
RARA-208ENST00000577646 TOB2Q14106 344 aaPredicted RBP14.36□□□□□ -0.11
RARA-208ENST00000577646 CPLX2Q6PUV4 134 aaKnown RBP14.36□□□□□ -0.11
RARA-208ENST00000577646 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
RARA-208ENST00000577646 GPR142Q7Z601 462 aa14.36□□□□□ -0.11
RARA-208ENST00000577646 MICU3Q86XE3 530 aa14.36□□□□□ -0.11
RARA-208ENST00000577646 CPXCR1Q8N123 301 aa14.36□□□□□ -0.11
RARA-208ENST00000577646 RRP36Q96EU6 259 aaKnown RBP14.36□□□□□ -0.11
RARA-208ENST00000577646 AMNQ9BXJ7 453 aa14.36□□□□□ -0.11
RARA-208ENST00000577646 UBA5Q9GZZ9 404 aa14.36□□□□□ -0.11
RARA-208ENST00000577646 PORCNQ9H237 461 aa14.36□□□□□ -0.11
RARA-208ENST00000577646 MAP3K20Q9NYL2 800 aaKnown RBP14.36□□□□□ -0.11
RARA-208ENST00000577646 DIS3Q9Y2L1 958 aaKnown RBP14.36□□□□□ -0.11
RARA-208ENST00000577646 ZNF536O15090 1300 aa14.36□□□□□ -0.11
RARA-208ENST00000577646 GOLGA8AA7E2F4 631 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 GOLGA8BA8MQT2 603 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 HOXC6P09630 235 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 PDIA3P30101 505 aaKnown RBP14.35□□□□□ -0.11
RARA-208ENST00000577646 MCM2P49736 904 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 KCTD2Q14681 263 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 MORN1Q5T089 497 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 TMTC3Q6ZXV5 915 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 NCAPG2Q86XI2 1143 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 FBXO11Q86XK2 927 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 PXYLP1Q8TE99 480 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 ACAD9Q9H845 621 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 RAVER2Q9HCJ3 691 aaKnown RBP14.35□□□□□ -0.11
RARA-208ENST00000577646 SEC63Q9UGP8 760 aaKnown RBP14.35□□□□□ -0.11
RARA-208ENST00000577646 GJD2Q9UKL4 321 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 CCPG1Q9ULG6 757 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 MRPL11Q9Y3B7 192 aaKnown RBP14.35□□□□□ -0.11
RARA-208ENST00000577646 PFASO15067 1338 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 ABCB11O95342 1321 aa14.35□□□□□ -0.11
RARA-208ENST00000577646 LOC102724159A0A0B4J2E5 919 aa14.34□□□□□ -0.11
RARA-208ENST00000577646 hCG_1984214I3L0E3 225 aa14.34□□□□□ -0.11
RARA-208ENST00000577646 ST18O60284 1047 aa14.34□□□□□ -0.11
RARA-208ENST00000577646 RGS2P41220 211 aa14.34□□□□□ -0.11
RARA-208ENST00000577646 GRB14Q14449 540 aa14.34□□□□□ -0.11
RARA-208ENST00000577646 PWP2Q15269 919 aaKnown RBP14.34□□□□□ -0.11
RARA-208ENST00000577646 CDC37Q16543 378 aaPredicted RBP14.34□□□□□ -0.11
RARA-208ENST00000577646 RASGRP2Q7LDG7 609 aa14.34□□□□□ -0.11
RARA-208ENST00000577646 NBPF11Q86T75 865 aa14.34□□□□□ -0.11
RARA-208ENST00000577646 MCF2L2Q86YR7 1114 aa14.34□□□□□ -0.11
RARA-208ENST00000577646 FAM177A1Q8N128 213 aaPredicted RBP14.34□□□□□ -0.11
RARA-208ENST00000577646 ZNF713Q8N859 430 aaPredicted RBP14.34□□□□□ -0.11
RARA-208ENST00000577646 USP6NLQ92738 828 aa14.34□□□□□ -0.11
RARA-208ENST00000577646 ZSCAN31Q96LW9 406 aaPredicted RBP14.34□□□□□ -0.11
RARA-208ENST00000577646 TRERF1Q96PN7 1200 aa14.34□□□□□ -0.11
RARA-208ENST00000577646 KIF2CQ99661 725 aa14.34□□□□□ -0.11
RARA-208ENST00000577646 MYL10Q9BUA6 226 aa14.34□□□□□ -0.11
RARA-208ENST00000577646 CDKL5O76039 1030 aa14.33□□□□□ -0.12
RARA-208ENST00000577646 IFNAR1P17181 557 aa14.33□□□□□ -0.12
RARA-208ENST00000577646 CAPN2P17655 700 aa14.33□□□□□ -0.12
RARA-208ENST00000577646 AK2P54819 239 aa14.33□□□□□ -0.12
RARA-208ENST00000577646 MAP2K5Q13163 448 aa14.33□□□□□ -0.12
RARA-208ENST00000577646 QRICH1Q2TAL8 776 aa14.33□□□□□ -0.12
RARA-208ENST00000577646 SLC9C1Q4G0N8 1177 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms