RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 RANBP17Q9H2T7 1088 aaKnown RBP9.89□□□□□ -0.83
PRPF8-213ENST00000576407 SLC38A10Q9HBR0 1119 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 V9GY48 417 aaPredicted RBP9.89□□□□□ -0.83
PRPF8-213ENST00000576407 A0A0G2JMZ2 1700 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 PNMA6FA0A0J9YX94 578 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 PRPF3O43395 683 aaKnown RBP9.88□□□□□ -0.83
PRPF8-213ENST00000576407 JAK2O60674 1132 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 PEX10O60683 326 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 ZBED4O75132 1171 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 ALDH1A1P00352 501 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 TMEM132BQ14DG7 1078 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 QRICH1Q2TAL8 776 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 CCDC174Q6PII3 467 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 TRIM22Q8IYM9 498 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 DNAJC5GQ8N7S2 189 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 MB21D1Q8N884 522 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 REPS2Q8NFH8 660 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 SMARCC2Q8TAQ2 1214 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 BTBD7Q9P203 1132 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 RBPJLQ9UBG7 517 aa9.88□□□□□ -0.83
PRPF8-213ENST00000576407 SEC63Q9UGP8 760 aaKnown RBP9.88□□□□□ -0.83
PRPF8-213ENST00000576407 CTDP1Q9Y5B0 961 aaPredicted RBP9.88□□□□□ -0.83
PRPF8-213ENST00000576407 ZNF536O15090 1300 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 ADGRA2Q96PE1 1338 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 STK36Q9NRP7 1315 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 COL11A1P12107 1806 aaPredicted RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 ATP2A1O14983 1001 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 CA12O43570 354 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 PPP1R11O60927 126 aaPredicted RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 CNMDO75829 334 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 DEXIO95424 95 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 ICAM1P05362 532 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 FDPSP14324 419 aaKnown RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 GCLCP48506 637 aaPredicted RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 OAZ1P54368 228 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 AKAP17AQ02040 695 aaKnown RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 CRHR2Q13324 411 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 PKN1Q16512 942 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 PFKFB3Q16875 520 aaPredicted RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 CPXCR1Q8N123 301 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 ANKRD13CQ8N6S4 541 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 GTF3C2Q8WUA4 911 aaPredicted RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 DDX11Q96FC9 970 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 INTS4Q96HW7 963 aaKnown RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 AGBL1Q96MI9 1066 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 PAGR1Q9BTK6 254 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 ZFYVE28Q9HCC9 887 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 RAVER2Q9HCJ3 691 aaKnown RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 TXNRD2Q9NNW7 524 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 FOXD4L1Q9NU39 408 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 RNF186Q9NXI6 227 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 RBM27Q9P2N5 1060 aaKnown RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 ORC3Q9UBD5 711 aaPredicted RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 ZNF214Q9UL59 606 aaPredicted RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 RABGAP1Q9Y3P9 1069 aa9.87□□□□□ -0.83
PRPF8-213ENST00000576407 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 BAZ2BQ9UIF8 2168 aaKnown RBP9.87□□□□□ -0.83
PRPF8-213ENST00000576407 TLR2O60603 784 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 TRPA1O75762 1119 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 HSP90AA1P07900 732 aaKnown RBP9.86□□□□□ -0.83
PRPF8-213ENST00000576407 SCG2P13521 617 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 TAL1P17542 331 aaPredicted RBP9.86□□□□□ -0.83
PRPF8-213ENST00000576407 STAT3P40763 770 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 SLC4A3P48751 1232 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 HMGN5P82970 282 aaKnown RBP9.86□□□□□ -0.83
PRPF8-213ENST00000576407 PLS1Q14651 629 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 USH1GQ495M9 461 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 SNRNP48Q6IEG0 339 aaKnown RBP9.86□□□□□ -0.83
PRPF8-213ENST00000576407 HEATR3Q7Z4Q2 680 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 FBXO11Q86XK2 927 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 GPKOWQ92917 476 aaPredicted RBP eCLIP9.86□□□□□ -0.83
PRPF8-213ENST00000576407 AIFM3Q96NN9 605 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 AMNQ9BXJ7 453 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 SPATC1LQ9H0A9 340 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 R3HDMLQ9H3Y0 253 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 MORF4L1Q9UBU8 362 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 CPA4Q9UI42 421 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 CCPG1Q9ULG6 757 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 SMC3Q9UQE7 1217 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 PCDHA1Q9Y5I3 950 aa9.86□□□□□ -0.83
PRPF8-213ENST00000576407 TBC1D8O95759 1140 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 BCRP11274 1271 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 GJB2P29033 226 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 ERVK-9P63128 1117 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 ERVK-24P63145 666 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 FAM110CQ1W6H9 321 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 Q3C1V9 767 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 WWC2Q6AWC2 1192 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 C17orf99Q6UX52 265 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 RIOX2Q8IUF8 465 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 SPRYD3Q8NCJ5 442 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 GPRC5AQ8NFJ5 357 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 WASF1Q92558 559 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 COA7Q96BR5 231 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 ALG1Q9BT22 464 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 CFHR5Q9BXR6 569 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 MOV10L1Q9BXT6 1211 aaKnown RBP9.85□□□□□ -0.83
PRPF8-213ENST00000576407 TEX13BQ9BXU2 312 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 BARHL2Q9NY43 387 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 PNMA2Q9UL42 364 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms