RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 RPAP2Q8IXW5 612 aaPredicted RBP7.51□□□□□ -1.21
SMG1-217ENST00000569764 FAM212AQ96EL1 285 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 CCDC17Q96LX7 622 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 LZTS2Q9BRK4 669 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 ABCG4Q9H172 646 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 ARNT2Q9HBZ2 717 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 DONSONQ9NYP3 566 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 RPN1P04843 607 aaKnown RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 ASNSP08243 561 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 EPB42P16452 691 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 POLR2FP61218 127 aaKnown RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 VAC14Q08AM6 782 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 DPP9Q86TI2 863 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 FOXP4Q8IVH2 680 aaPredicted RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 SVIPQ8NHG7 77 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 TDRD7Q8NHU6 1098 aaKnown RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 CUL5Q93034 780 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 TBC1D20Q96BZ9 403 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 MRFAP1L1Q96HT8 127 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 RABEP2Q9H5N1 569 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 PARP4Q9UKK3 1724 aaKnown RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 NBPF26B4DH59 902 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 IDH1O75874 414 aaKnown RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 KIAA0754O94854 1291 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 ZBTB48P10074 688 aaPredicted RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 GNAT2P19087 354 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 TNFAIP3P21580 790 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 PRELPP51888 382 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 HSD17B7P56937 341 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 SESN3P58005 492 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 FKBP1AP62942 108 aaKnown RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 IL31Q6EBC2 164 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 KLHL10Q6JEL2 608 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 INTS5Q6P9B9 1019 aaKnown RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 UNC5DQ6UXZ4 953 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 FAM126AQ9BYI3 521 aaPredicted RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 C6orf203Q9P0P8 240 aaPredicted RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 ITGB4P16144 1822 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 CCL15-CCL14A0A0B4J2E2 113 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 KLHL33A6NCF5 533 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 SOWAHDA6NJG2 315 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 K7ELQ4 463 aaPredicted RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 TRPC1P48995 793 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 BCAMP50895 628 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 KIF11P52732 1056 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 ATP8B2P98198 1209 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 CXCL9Q07325 125 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 CCL15Q16663 113 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 C21orf62-AS1Q17RA5 79 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 EPHA10Q5JZY3 1008 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 RNF20Q5VTR2 975 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 SUSD4Q5VX71 490 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 FBXO46Q6PJ61 603 aaPredicted RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 SCLT1Q96NL6 688 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 AP5M1Q9H0R1 490 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 ZCCHC17Q9NP64 241 aaKnown RBP7.5□□□□□ -1.21
SMG1-217ENST00000569764 HOMER2Q9NSB8 354 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 CFAP45Q9UL16 551 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 KCPQ6ZWJ8 1503 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 ARFGEF2Q9Y6D5 1785 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 PAPPAQ13219 1627 aa7.5□□□□□ -1.21
SMG1-217ENST00000569764 SRGAP3O43295 1099 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 B3GALNT1O75752 331 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 SDSP20132 328 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 MRPL28Q13084 256 aaKnown RBP7.49□□□□□ -1.21
SMG1-217ENST00000569764 SCARF1Q14162 830 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 CFAP100Q494V2 611 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 TTC22Q5TAA0 569 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 ANGEL2Q5VTE6 544 aaKnown RBP7.49□□□□□ -1.21
SMG1-217ENST00000569764 FAM117BQ6P1L5 589 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 AP1M1Q9BXS5 423 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 IL1RAPL2Q9NP60 686 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 MYOZ2Q9NPC6 264 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 USP40Q9NVE5 1235 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 ZNHIT6Q9NWK9 470 aaKnown RBP7.49□□□□□ -1.21
SMG1-217ENST00000569764 FBXO40Q9UH90 709 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 CXCL11O14625 94 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 SCGB1D2O95969 90 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 PLPP6Q8IY26 295 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 USP6NLQ92738 828 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 POLR3CQ9BUI4 534 aaPredicted RBP7.49□□□□□ -1.21
SMG1-217ENST00000569764 IQCGQ9H095 443 aaKnown RBP7.49□□□□□ -1.21
SMG1-217ENST00000569764 PA2G4Q9UQ80 394 aaKnown RBP7.49□□□□□ -1.21
SMG1-217ENST00000569764 ACTN1P12814 892 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 TRIM74Q86UV6 250 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 TRIM73Q86UV7 250 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 ZNF34Q8IZ26 560 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 FAM184AQ8NB25 1140 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 KLHDC4Q8TBB5 520 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 C8orf48Q96LL4 319 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 SRPK1Q96SB4 655 aaKnown RBP7.49□□□□□ -1.21
SMG1-217ENST00000569764 ANTXR1Q9H6X2 564 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 RIC8AQ9NPQ8 531 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 FANCLQ9NW38 375 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 INPP5FQ9Y2H2 1132 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 R3HCC1Q9Y3T6 440 aaKnown RBP7.49□□□□□ -1.21
SMG1-217ENST00000569764 AK9Q5TCS8 1911 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 AFDNP55196 1824 aaKnown RBP7.49□□□□□ -1.21
SMG1-217ENST00000569764 SYNDIG1LA6NDD5 238 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 C19orf81C9J6K1 198 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms