RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 FKTNO75072 461 aa19.44■□□□□ 0.7
COMMD4-224ENST00000568877 HSPA8P11142 646 aaKnown RBP19.44■□□□□ 0.7
COMMD4-224ENST00000568877 STAT3P40763 770 aa19.44■□□□□ 0.7
COMMD4-224ENST00000568877 CTCFP49711 727 aaPredicted RBP19.44■□□□□ 0.7
COMMD4-224ENST00000568877 ME3Q16798 604 aa19.44■□□□□ 0.7
COMMD4-224ENST00000568877 CCDC82Q8N4S0 544 aa19.44■□□□□ 0.7
COMMD4-224ENST00000568877 ZNF296Q8WUU4 475 aaPredicted RBP19.44■□□□□ 0.7
COMMD4-224ENST00000568877 MTMR8Q96EF0 704 aa19.44■□□□□ 0.7
COMMD4-224ENST00000568877 MOV10L1Q9BXT6 1211 aaKnown RBP19.44■□□□□ 0.7
COMMD4-224ENST00000568877 TEX13BQ9BXU2 312 aa19.44■□□□□ 0.7
COMMD4-224ENST00000568877 SLKQ9H2G2 1235 aaPredicted RBP19.44■□□□□ 0.7
COMMD4-224ENST00000568877 NCOA5Q9HCD5 579 aaKnown RBP19.44■□□□□ 0.7
COMMD4-224ENST00000568877 ZNF536O15090 1300 aa19.44■□□□□ 0.7
COMMD4-224ENST00000568877 ICAM1P05362 532 aa19.43■□□□□ 0.7
COMMD4-224ENST00000568877 LACTBP83111 547 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-224ENST00000568877 CDC37Q16543 378 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-224ENST00000568877 SNRNP48Q6IEG0 339 aaKnown RBP19.43■□□□□ 0.7
COMMD4-224ENST00000568877 RIOX2Q8IUF8 465 aa19.43■□□□□ 0.7
COMMD4-224ENST00000568877 AGBL1Q96MI9 1066 aa19.43■□□□□ 0.7
COMMD4-224ENST00000568877 ZBTB5O15062 677 aa19.42■□□□□ 0.7
COMMD4-224ENST00000568877 LARGE1O95461 756 aa19.42■□□□□ 0.7
COMMD4-224ENST00000568877 SLC25A27O95847 323 aa19.42■□□□□ 0.7
COMMD4-224ENST00000568877 FUT2Q10981 343 aa19.42■□□□□ 0.7
COMMD4-224ENST00000568877 SCRN1Q12765 414 aa19.42■□□□□ 0.7
COMMD4-224ENST00000568877 QRICH1Q2TAL8 776 aa19.42■□□□□ 0.7
COMMD4-224ENST00000568877 HOMER1Q86YM7 354 aa19.42■□□□□ 0.7
COMMD4-224ENST00000568877 CCAR1Q8IX12 1150 aaKnown RBP19.42■□□□□ 0.7
COMMD4-224ENST00000568877 RRP36Q96EU6 259 aaKnown RBP19.42■□□□□ 0.7
COMMD4-224ENST00000568877 ZSCAN31Q96LW9 406 aaPredicted RBP19.42■□□□□ 0.7
COMMD4-224ENST00000568877 PIGSQ96S52 555 aa19.42■□□□□ 0.7
COMMD4-224ENST00000568877 PORCNQ9H237 461 aa19.42■□□□□ 0.7
COMMD4-224ENST00000568877 PNMA2Q9UL42 364 aa19.42■□□□□ 0.7
COMMD4-224ENST00000568877 CD2BP2O95400 341 aaKnown RBP19.41■□□□□ 0.7
COMMD4-224ENST00000568877 MAPK4P31152 587 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 COPB2P35606 906 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 SLC4A3P48751 1232 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 MCM2P49736 904 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 LBX1P52954 281 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 KIF22Q14807 665 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 NTRK3Q16288 839 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 NCAPG2Q86XI2 1143 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 NECAB1Q8N987 351 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 SHCBP1Q8NEM2 672 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 PIBF1Q8WXW3 757 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 ERO1AQ96HE7 468 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 MROH8Q9H579 483 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 EFCC1Q9HA90 598 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 CCPG1Q9ULG6 757 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 RIPK3Q9Y572 518 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 CNTNAP5Q8WYK1 1306 aa19.41■□□□□ 0.7
COMMD4-224ENST00000568877 PNMA6FA0A0J9YX94 578 aa19.4■□□□□ 0.7
COMMD4-224ENST00000568877 CPLX1O14810 134 aa19.4■□□□□ 0.7
COMMD4-224ENST00000568877 ECM2O94769 699 aaPredicted RBP19.4■□□□□ 0.7
COMMD4-224ENST00000568877 IFNAR1P17181 557 aa19.4■□□□□ 0.7
COMMD4-224ENST00000568877 ERCC3P19447 782 aa19.4■□□□□ 0.7
COMMD4-224ENST00000568877 FCGRTP55899 365 aa19.4■□□□□ 0.7
COMMD4-224ENST00000568877 CPLX2Q6PUV4 134 aaKnown RBP19.4■□□□□ 0.7
COMMD4-224ENST00000568877 CD99L2Q8TCZ2 262 aa19.4■□□□□ 0.7
COMMD4-224ENST00000568877 GTF3C6Q969F1 213 aa19.4■□□□□ 0.7
COMMD4-224ENST00000568877 ARHGAP39Q9C0H5 1083 aa19.4■□□□□ 0.7
COMMD4-224ENST00000568877 SEC63Q9UGP8 760 aaKnown RBP19.4■□□□□ 0.7
COMMD4-224ENST00000568877 COL11A1P12107 1806 aaPredicted RBP19.39■□□□□ 0.7
COMMD4-224ENST00000568877 ALAS1P13196 640 aa19.39■□□□□ 0.69
COMMD4-224ENST00000568877 CTGFP29279 349 aa19.39■□□□□ 0.69
COMMD4-224ENST00000568877 PSMC4P43686 418 aa19.39■□□□□ 0.69
COMMD4-224ENST00000568877 TKFCQ3LXA3 575 aa19.39■□□□□ 0.69
COMMD4-224ENST00000568877 WDR78Q5VTH9 848 aa19.39■□□□□ 0.69
COMMD4-224ENST00000568877 FBXO11Q86XK2 927 aa19.39■□□□□ 0.69
COMMD4-224ENST00000568877 AMNQ9BXJ7 453 aa19.39■□□□□ 0.69
COMMD4-224ENST00000568877 SH2B1Q9NRF2 756 aaPredicted RBP19.39■□□□□ 0.69
COMMD4-224ENST00000568877 V9GY48 417 aaPredicted RBP19.39■□□□□ 0.69
COMMD4-224ENST00000568877 hCG_1642624A0A1W2PR95 340 aa19.38■□□□□ 0.69
COMMD4-224ENST00000568877 PPP1R11O60927 126 aaPredicted RBP19.38■□□□□ 0.69
COMMD4-224ENST00000568877 FMNL1O95466 1100 aaPredicted RBP19.38■□□□□ 0.69
COMMD4-224ENST00000568877 TAL1P17542 331 aaPredicted RBP19.38■□□□□ 0.69
COMMD4-224ENST00000568877 CAP1Q01518 475 aa19.38■□□□□ 0.69
COMMD4-224ENST00000568877 TRAF1Q13077 416 aa19.38■□□□□ 0.69
COMMD4-224ENST00000568877 ARHGEF6Q15052 776 aa19.38■□□□□ 0.69
COMMD4-224ENST00000568877 USH1GQ495M9 461 aa19.38■□□□□ 0.69
COMMD4-224ENST00000568877 CHST13Q8NET6 341 aa19.38■□□□□ 0.69
COMMD4-224ENST00000568877 PHKBQ93100 1093 aa19.38■□□□□ 0.69
COMMD4-224ENST00000568877 TRIM47Q96LD4 638 aa19.38■□□□□ 0.69
COMMD4-224ENST00000568877 TRERF1Q96PN7 1200 aa19.38■□□□□ 0.69
COMMD4-224ENST00000568877 CWC22Q9HCG8 908 aaKnown RBP19.38■□□□□ 0.69
COMMD4-224ENST00000568877 HOMER2Q9NSB8 354 aa19.38■□□□□ 0.69
COMMD4-224ENST00000568877 TNPO2O14787 897 aaKnown RBP19.37■□□□□ 0.69
COMMD4-224ENST00000568877 PRPF3O43395 683 aaKnown RBP19.37■□□□□ 0.69
COMMD4-224ENST00000568877 CDKL5O76039 1030 aa19.37■□□□□ 0.69
COMMD4-224ENST00000568877 GPR142Q7Z601 462 aa19.37■□□□□ 0.69
COMMD4-224ENST00000568877 PLEKHH3Q7Z736 793 aa19.37■□□□□ 0.69
COMMD4-224ENST00000568877 SLC26A6Q9BXS9 759 aa19.37■□□□□ 0.69
COMMD4-224ENST00000568877 RNF26Q9BY78 433 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-224ENST00000568877 RNF146Q9NTX7 359 aa19.37■□□□□ 0.69
COMMD4-224ENST00000568877 FBXO40Q9UH90 709 aa19.37■□□□□ 0.69
COMMD4-224ENST00000568877 PCDHA1Q9Y5I3 950 aa19.37■□□□□ 0.69
COMMD4-224ENST00000568877 ABCB11O95342 1321 aa19.36■□□□□ 0.69
COMMD4-224ENST00000568877 PPFIA3O75145 1194 aa19.36■□□□□ 0.69
COMMD4-224ENST00000568877 AKAP17AQ02040 695 aaKnown RBP19.36■□□□□ 0.69
COMMD4-224ENST00000568877 SSRP1Q08945 709 aaKnown RBP19.36■□□□□ 0.69
COMMD4-224ENST00000568877 ST3GAL1Q11201 340 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms