RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 CCDC136Q96JN2 1154 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 TRERF1Q96PN7 1200 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 ZSCAN10Q96SZ4 725 aaPredicted RBP12.16□□□□□ -0.46
UBR1-207ENST00000568782 MPHOSPH6Q99547 160 aaKnown RBP12.16□□□□□ -0.46
UBR1-207ENST00000568782 ZKSCAN3Q9BRR0 538 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 GPCPD1Q9NPB8 672 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 CCPG1Q9ULG6 757 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 PRR12Q9ULL5 1215 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 RIPK3Q9Y572 518 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 FRMPD2Q68DX3 1309 aaPredicted RBP12.15□□□□□ -0.46
UBR1-207ENST00000568782 H0YGN5 161 aa12.15□□□□□ -0.46
UBR1-207ENST00000568782 POTEB2H3BUK9 544 aa12.15□□□□□ -0.46
UBR1-207ENST00000568782 DHX16O60231 1041 aaKnown RBP12.15□□□□□ -0.46
UBR1-207ENST00000568782 NOVP48745 357 aa12.15□□□□□ -0.46
UBR1-207ENST00000568782 IFIT1BQ5T764 474 aaKnown RBP12.15□□□□□ -0.46
UBR1-207ENST00000568782 SYDE2Q5VT97 1194 aa12.15□□□□□ -0.46
UBR1-207ENST00000568782 LHX8Q68G74 356 aa12.15□□□□□ -0.46
UBR1-207ENST00000568782 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
UBR1-207ENST00000568782 PNMA1Q8ND90 353 aa12.15□□□□□ -0.46
UBR1-207ENST00000568782 SPC25Q9HBM1 224 aa12.15□□□□□ -0.46
UBR1-207ENST00000568782 RNF146Q9NTX7 359 aa12.15□□□□□ -0.46
UBR1-207ENST00000568782 ZSWIM5Q9P217 1185 aa12.15□□□□□ -0.46
UBR1-207ENST00000568782 NEDD4P46934 1319 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 SYNGAP1Q96PV0 1343 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 ASB14A6NK59 587 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 B4DLN1 442 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 DNM1LO00429 736 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 ICAM1P05362 532 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 PDHBP11177 359 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 AKR1A1P14550 325 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 SLC16A2P36021 539 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 MRPL12P52815 198 aaKnown RBP12.14□□□□□ -0.47
UBR1-207ENST00000568782 PRAMEF19Q5SWL8 479 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 BTNL9Q6UXG8 535 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 RNF180Q86T96 592 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 NCOA7Q8NI08 942 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 DIS3LQ8TF46 1054 aaKnown RBP12.14□□□□□ -0.47
UBR1-207ENST00000568782 AGBL1Q96MI9 1066 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 SENP6Q9GZR1 1112 aaPredicted RBP12.14□□□□□ -0.47
UBR1-207ENST00000568782 ABHD16BQ9H3Z7 469 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 PRKAG2Q9UGJ0 569 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 FAM184BQ9ULE4 1060 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 TACC3Q9Y6A5 838 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 MCM3APO60318 1980 aa12.14□□□□□ -0.47
UBR1-207ENST00000568782 TNKSO95271 1327 aa12.13□□□□□ -0.47
UBR1-207ENST00000568782 SGSM2O43147 1006 aa12.13□□□□□ -0.47
UBR1-207ENST00000568782 PARP1P09874 1014 aaKnown RBP12.13□□□□□ -0.47
UBR1-207ENST00000568782 ZNF543Q08ER8 600 aa12.13□□□□□ -0.47
UBR1-207ENST00000568782 ASPRV1Q53RT3 343 aa12.13□□□□□ -0.47
UBR1-207ENST00000568782 ANO1Q5XXA6 986 aa12.13□□□□□ -0.47
UBR1-207ENST00000568782 NSMFQ6X4W1 530 aa12.13□□□□□ -0.47
UBR1-207ENST00000568782 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.13□□□□□ -0.47
UBR1-207ENST00000568782 C7orf61Q8IZ16 206 aa12.13□□□□□ -0.47
UBR1-207ENST00000568782 RANBP17Q9H2T7 1088 aaKnown RBP12.13□□□□□ -0.47
UBR1-207ENST00000568782 XPNPEP3Q9NQH7 507 aa12.13□□□□□ -0.47
UBR1-207ENST00000568782 ADD3Q9UEY8 706 aaKnown RBP12.13□□□□□ -0.47
UBR1-207ENST00000568782 ZHX1Q9UKY1 873 aaPredicted RBP12.13□□□□□ -0.47
UBR1-207ENST00000568782 DNAJC25-GNG10A0A024R161 153 aa12.12□□□□□ -0.47
UBR1-207ENST00000568782 PTPDC1A2A3K4 754 aa12.12□□□□□ -0.47
UBR1-207ENST00000568782 SNAP25P60880 206 aa12.12□□□□□ -0.47
UBR1-207ENST00000568782 GJC2Q5T442 439 aaPredicted RBP12.12□□□□□ -0.47
UBR1-207ENST00000568782 TTBK2Q6IQ55 1244 aa12.12□□□□□ -0.47
UBR1-207ENST00000568782 MAMDC4Q6UXC1 1216 aa12.12□□□□□ -0.47
UBR1-207ENST00000568782 NOL8Q76FK4 1167 aaKnown RBP12.12□□□□□ -0.47
UBR1-207ENST00000568782 TRPV1Q8NER1 839 aa12.12□□□□□ -0.47
UBR1-207ENST00000568782 IFIT3O14879 490 aaKnown RBP12.11□□□□□ -0.47
UBR1-207ENST00000568782 TRAF1Q13077 416 aa12.11□□□□□ -0.47
UBR1-207ENST00000568782 ACVR2BQ13705 512 aa12.11□□□□□ -0.47
UBR1-207ENST00000568782 RNF20Q5VTR2 975 aa12.11□□□□□ -0.47
UBR1-207ENST00000568782 ARMCX2Q7L311 632 aa12.11□□□□□ -0.47
UBR1-207ENST00000568782 ENAHQ8N8S7 591 aaPredicted RBP12.11□□□□□ -0.47
UBR1-207ENST00000568782 ANKS1AQ92625 1134 aa12.11□□□□□ -0.47
UBR1-207ENST00000568782 A1CFQ9NQ94 594 aaKnown RBP12.11□□□□□ -0.47
UBR1-207ENST00000568782 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
UBR1-207ENST00000568782 ALPK3Q96L96 1907 aa12.11□□□□□ -0.47
UBR1-207ENST00000568782 ZNF536O15090 1300 aa12.11□□□□□ -0.47
UBR1-207ENST00000568782 IGHA2P01877 340 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 CYP21A2P08686 494 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 GOLGA8HP0CJ92 632 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 SNHG28P0DPA3 235 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 PTH1RQ03431 593 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 WTAPQ15007 396 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 BMP2KLQ5H9B9 411 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 RNF207Q6ZRF8 634 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 CCDC144CPQ8IYA2 1237 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 PCSK9Q8NBP7 692 aaKnown RBP12.1□□□□□ -0.47
UBR1-207ENST00000568782 NUP133Q8WUM0 1156 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 MAP4K1Q92918 833 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 ANO2Q9NQ90 1003 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 WDR19Q8NEZ3 1342 aa12.1□□□□□ -0.47
UBR1-207ENST00000568782 LOC102724159A0A0B4J2E5 919 aa12.09□□□□□ -0.47
UBR1-207ENST00000568782 E7EWF7 191 aa12.09□□□□□ -0.47
UBR1-207ENST00000568782 DUSP11O75319 330 aaKnown RBP12.09□□□□□ -0.47
UBR1-207ENST00000568782 SNAI1O95863 264 aaPredicted RBP12.09□□□□□ -0.47
UBR1-207ENST00000568782 ZNF865P0CJ78 1059 aaPredicted RBP12.09□□□□□ -0.47
UBR1-207ENST00000568782 COL6A1P12109 1028 aa12.09□□□□□ -0.47
UBR1-207ENST00000568782 MNX1P50219 401 aaPredicted RBP12.09□□□□□ -0.47
UBR1-207ENST00000568782 ATN1P54259 1190 aaPredicted RBP12.09□□□□□ -0.47
UBR1-207ENST00000568782 CNTN2Q02246 1040 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms