RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 NOP2P46087 812 aaKnown RBP12.79□□□□□ -0.36
NIFKP4-201ENST00000567275 FXNQ16595 210 aa12.79□□□□□ -0.36
NIFKP4-201ENST00000567275 C6orf15Q6UXA7 325 aaPredicted RBP12.79□□□□□ -0.36
NIFKP4-201ENST00000567275 FCRL2Q96LA5 508 aaPredicted RBP12.79□□□□□ -0.36
NIFKP4-201ENST00000567275 EBF1Q9UH73 591 aa12.79□□□□□ -0.36
NIFKP4-201ENST00000567275 CCDC88BA6NC98 1476 aa12.78□□□□□ -0.36
NIFKP4-201ENST00000567275 TRHRP34981 398 aaPredicted RBP12.78□□□□□ -0.36
NIFKP4-201ENST00000567275 POU4F1Q01851 419 aa12.78□□□□□ -0.36
NIFKP4-201ENST00000567275 LILRA2Q8N149 483 aa12.78□□□□□ -0.36
NIFKP4-201ENST00000567275 MAP6Q96JE9 813 aa12.78□□□□□ -0.36
NIFKP4-201ENST00000567275 G6PC3Q9BUM1 346 aa12.78□□□□□ -0.36
NIFKP4-201ENST00000567275 C19orf44Q9H6X5 657 aa12.78□□□□□ -0.36
NIFKP4-201ENST00000567275 USP2O75604 605 aaPredicted RBP12.77□□□□□ -0.37
NIFKP4-201ENST00000567275 DDAH1O94760 285 aa12.77□□□□□ -0.37
NIFKP4-201ENST00000567275 GSTM1P09488 218 aa12.77□□□□□ -0.37
NIFKP4-201ENST00000567275 ANKS3Q6ZW76 656 aa12.77□□□□□ -0.37
NIFKP4-201ENST00000567275 APBA2Q99767 749 aa12.77□□□□□ -0.37
NIFKP4-201ENST00000567275 TANGO6Q9C0B7 1094 aa12.77□□□□□ -0.37
NIFKP4-201ENST00000567275 AP5S1Q9NUS5 200 aa12.77□□□□□ -0.37
NIFKP4-201ENST00000567275 KIR2DL1P43626 348 aaPredicted RBP12.76□□□□□ -0.37
NIFKP4-201ENST00000567275 KIR2DL2P43627 348 aaPredicted RBP12.76□□□□□ -0.37
NIFKP4-201ENST00000567275 NR0B2Q15466 257 aa12.76□□□□□ -0.37
NIFKP4-201ENST00000567275 SLC14A2Q15849 920 aa12.76□□□□□ -0.37
NIFKP4-201ENST00000567275 FAM178BQ8IXR5 827 aa12.76□□□□□ -0.37
NIFKP4-201ENST00000567275 HNRNPLLQ8WVV9 542 aaKnown RBP12.76□□□□□ -0.37
NIFKP4-201ENST00000567275 SLC12A9Q9BXP2 914 aa12.76□□□□□ -0.37
NIFKP4-201ENST00000567275 SUSD2Q9UGT4 822 aa12.76□□□□□ -0.37
NIFKP4-201ENST00000567275 CD3EP07766 207 aa12.75□□□□□ -0.37
NIFKP4-201ENST00000567275 ZNF143P52747 638 aaPredicted RBP12.75□□□□□ -0.37
NIFKP4-201ENST00000567275 MPZL3Q6UWV2 235 aa12.75□□□□□ -0.37
NIFKP4-201ENST00000567275 CEP128Q6ZU80 1094 aa12.75□□□□□ -0.37
NIFKP4-201ENST00000567275 NAT16Q8N8M0 369 aa12.75□□□□□ -0.37
NIFKP4-201ENST00000567275 GPR160Q9UJ42 338 aa12.75□□□□□ -0.37
NIFKP4-201ENST00000567275 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.75□□□□□ -0.37
NIFKP4-201ENST00000567275 TOPBP1Q92547 1522 aa12.74□□□□□ -0.37
NIFKP4-201ENST00000567275 B2RBV5 119 aa12.74□□□□□ -0.37
NIFKP4-201ENST00000567275 STK10O94804 968 aaKnown RBP12.74□□□□□ -0.37
NIFKP4-201ENST00000567275 RTP2Q5QGT7 225 aa12.74□□□□□ -0.37
NIFKP4-201ENST00000567275 PPP1R14AQ96A00 147 aa12.74□□□□□ -0.37
NIFKP4-201ENST00000567275 HHIPL1Q96JK4 782 aa12.74□□□□□ -0.37
NIFKP4-201ENST00000567275 TNFRSF10DQ9UBN6 386 aa12.74□□□□□ -0.37
NIFKP4-201ENST00000567275 CGGBP1Q9UFW8 167 aaPredicted RBP12.74□□□□□ -0.37
NIFKP4-201ENST00000567275 ATP2B1P20020 1258 aa12.73□□□□□ -0.37
NIFKP4-201ENST00000567275 RCC1LQ96I51 464 aaKnown RBP12.73□□□□□ -0.37
NIFKP4-201ENST00000567275 SP110Q9HB58 689 aa12.73□□□□□ -0.37
NIFKP4-201ENST00000567275 ERVK13-1Q9NX77 482 aa12.73□□□□□ -0.37
NIFKP4-201ENST00000567275 FAM53CQ9NYF3 392 aa12.73□□□□□ -0.37
NIFKP4-201ENST00000567275 APEX2Q9UBZ4 518 aa12.73□□□□□ -0.37
NIFKP4-201ENST00000567275 PPP1R1BQ9UD71 204 aaPredicted RBP12.73□□□□□ -0.37
NIFKP4-201ENST00000567275 AKT3Q9Y243 479 aa12.73□□□□□ -0.37
NIFKP4-201ENST00000567275 ZNF503-AS2A6NEH8 195 aa12.72□□□□□ -0.37
NIFKP4-201ENST00000567275 TIGD5Q53EQ6 642 aa12.72□□□□□ -0.37
NIFKP4-201ENST00000567275 ARHGEF39Q8N4T4 335 aa12.72□□□□□ -0.37
NIFKP4-201ENST00000567275 CRACR2BQ8N4Y2 399 aaPredicted RBP12.72□□□□□ -0.37
NIFKP4-201ENST00000567275 LIN37Q96GY3 246 aaPredicted RBP12.72□□□□□ -0.37
NIFKP4-201ENST00000567275 FCRL3Q96P31 734 aaPredicted RBP12.72□□□□□ -0.37
NIFKP4-201ENST00000567275 RNF32Q9H0A6 362 aa12.72□□□□□ -0.37
NIFKP4-201ENST00000567275 AMPD2Q01433 879 aa12.71□□□□□ -0.37
NIFKP4-201ENST00000567275 FMNL2Q96PY5 1086 aa12.71□□□□□ -0.37
NIFKP4-201ENST00000567275 GPR55Q9Y2T6 319 aaPredicted RBP12.71□□□□□ -0.37
NIFKP4-201ENST00000567275 ZNF608Q9ULD9 1512 aaPredicted RBP12.71□□□□□ -0.38
NIFKP4-201ENST00000567275 DNMBPQ6XZF7 1577 aa12.7□□□□□ -0.38
NIFKP4-201ENST00000567275 LRRC10BA6NIK2 292 aa12.7□□□□□ -0.38
NIFKP4-201ENST00000567275 NOP56O00567 594 aaKnown RBP12.7□□□□□ -0.38
NIFKP4-201ENST00000567275 VAMP4O75379 141 aa12.7□□□□□ -0.38
NIFKP4-201ENST00000567275 IFNGR1P15260 489 aa12.7□□□□□ -0.38
NIFKP4-201ENST00000567275 RTP1P59025 263 aa12.7□□□□□ -0.38
NIFKP4-201ENST00000567275 SNX17Q15036 470 aa12.7□□□□□ -0.38
NIFKP4-201ENST00000567275 DPY19L1Q2PZI1 675 aa12.7□□□□□ -0.38
NIFKP4-201ENST00000567275 BVESQ8NE79 360 aa12.7□□□□□ -0.38
NIFKP4-201ENST00000567275 MICAL1Q8TDZ2 1067 aa12.7□□□□□ -0.38
NIFKP4-201ENST00000567275 CWC22Q9HCG8 908 aaKnown RBP12.7□□□□□ -0.38
NIFKP4-201ENST00000567275 ST7Q9NRC1 585 aa12.7□□□□□ -0.38
NIFKP4-201ENST00000567275 FADS2P1A8MWK0 482 aa12.69□□□□□ -0.38
NIFKP4-201ENST00000567275 NRDCO43847 1150 aa12.69□□□□□ -0.38
NIFKP4-201ENST00000567275 PSPNO60542 156 aa12.69□□□□□ -0.38
NIFKP4-201ENST00000567275 GRB10Q13322 594 aa12.69□□□□□ -0.38
NIFKP4-201ENST00000567275 POMZP3Q6PJE2 187 aa12.69□□□□□ -0.38
NIFKP4-201ENST00000567275 CKAP2LQ8IYA6 745 aa12.69□□□□□ -0.38
NIFKP4-201ENST00000567275 GJB6O95452 261 aa12.68□□□□□ -0.38
NIFKP4-201ENST00000567275 TXKP42681 527 aa12.68□□□□□ -0.38
NIFKP4-201ENST00000567275 MLANAQ16655 118 aa12.68□□□□□ -0.38
NIFKP4-201ENST00000567275 SV2CQ496J9 727 aa12.68□□□□□ -0.38
NIFKP4-201ENST00000567275 TRIM55Q9BYV6 548 aa12.68□□□□□ -0.38
NIFKP4-201ENST00000567275 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.67□□□□□ -0.38
NIFKP4-201ENST00000567275 FGF10O15520 208 aaPredicted RBP12.67□□□□□ -0.38
NIFKP4-201ENST00000567275 KLF4O43474 513 aa12.67□□□□□ -0.38
NIFKP4-201ENST00000567275 SUSD5O60279 629 aa12.67□□□□□ -0.38
NIFKP4-201ENST00000567275 CYP2R1Q6VVX0 501 aa12.67□□□□□ -0.38
NIFKP4-201ENST00000567275 CELF2-AS1Q8N7Q2 184 aa12.67□□□□□ -0.38
NIFKP4-201ENST00000567275 ZNF513Q8N8E2 541 aaPredicted RBP12.67□□□□□ -0.38
NIFKP4-201ENST00000567275 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.67□□□□□ -0.38
NIFKP4-201ENST00000567275 LRP2BPQ9P2M1 347 aa12.67□□□□□ -0.38
NIFKP4-201ENST00000567275 EMC9Q9Y3B6 208 aa12.67□□□□□ -0.38
NIFKP4-201ENST00000567275 TAF6LQ9Y6J9 622 aa12.67□□□□□ -0.38
NIFKP4-201ENST00000567275 RIMBP3CA6NJZ7 1639 aa12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 RIMBP3BA6NNM3 1639 aa12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 RIMBP3Q9UFD9 1639 aa12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 A0A1W2PQ45 241 aaPredicted RBP12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 A0A1W2PQY0 241 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms