RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 PMS1P54277 932 aaKnown RBP7.28□□□□□ -1.24
GINS3-206ENST00000567143 CHRNDQ07001 517 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 CCDC178Q5BJE1 867 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 SOGA3Q5TF21 947 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 CC2D2BQ6DHV5 1058 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 KRT26Q7Z3Y9 468 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 KIAA1328Q86T90 577 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 TRIM47Q96LD4 638 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 SETDB2Q96T68 719 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 FHDC1Q9C0D6 1143 aaPredicted RBP7.28□□□□□ -1.24
GINS3-206ENST00000567143 CNNM2Q9H8M5 875 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 GNL3LQ9NVN8 582 aaKnown RBP7.28□□□□□ -1.24
GINS3-206ENST00000567143 FAM53CQ9NYF3 392 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 CDC23Q9UJX2 597 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 STX8Q9UNK0 236 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 CEP131Q9UPN4 1083 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 TSPY2A6NKD2 308 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 B4DLN1 442 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 KCNJ18B7U540 433 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 PPP1R3GB7ZBB8 358 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 TRIM21P19474 475 aaKnown RBP7.28□□□□□ -1.24
GINS3-206ENST00000567143 STAT6P42226 847 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 KCNJ12Q14500 433 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 CCDC122Q5T0U0 273 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 TPTE2Q6XPS3 522 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 RSRC2Q7L4I2 434 aaKnown RBP7.28□□□□□ -1.24
GINS3-206ENST00000567143 IQCA1Q86XH1 822 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.28□□□□□ -1.24
GINS3-206ENST00000567143 MTRQ99707 1265 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 FOXP1Q9H334 677 aaPredicted RBP7.28□□□□□ -1.24
GINS3-206ENST00000567143 XDHP47989 1333 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 TTC26A0AVF1 554 aa7.27□□□□□ -1.24
GINS3-206ENST00000567143 RAD21O60216 631 aa7.27□□□□□ -1.24
GINS3-206ENST00000567143 NPR1P16066 1061 aa7.27□□□□□ -1.24
GINS3-206ENST00000567143 PRCPP42785 496 aa7.27□□□□□ -1.24
GINS3-206ENST00000567143 SARSP49591 514 aaKnown RBP7.27□□□□□ -1.24
GINS3-206ENST00000567143 NAP1L1P55209 391 aaKnown RBP7.27□□□□□ -1.24
GINS3-206ENST00000567143 PKN1Q16512 942 aa7.27□□□□□ -1.24
GINS3-206ENST00000567143 LEKR1Q6ZMV7 388 aa7.27□□□□□ -1.24
GINS3-206ENST00000567143 SRBD1Q8N5C6 995 aaKnown RBP7.27□□□□□ -1.24
GINS3-206ENST00000567143 CTCFLQ8NI51 663 aaPredicted RBP7.27□□□□□ -1.24
GINS3-206ENST00000567143 DYNLL2Q96FJ2 89 aa7.27□□□□□ -1.24
GINS3-206ENST00000567143 ZSCAN10Q96SZ4 725 aaPredicted RBP7.27□□□□□ -1.24
GINS3-206ENST00000567143 NAPGQ99747 312 aaPredicted RBP7.27□□□□□ -1.24
GINS3-206ENST00000567143 BRMS1Q9HCU9 246 aa7.27□□□□□ -1.24
GINS3-206ENST00000567143 AGPAT5Q9NUQ2 364 aa7.27□□□□□ -1.24
GINS3-206ENST00000567143 EHD2Q9NZN4 543 aa7.27□□□□□ -1.24
GINS3-206ENST00000567143 ABCC12Q96J65 1359 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 GOLGA6L9A6NEM1 432 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 LRRIQ3A6PVS8 624 aaPredicted RBP7.27□□□□□ -1.25
GINS3-206ENST00000567143 GRIN3BO60391 1043 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 ATP1A1P05023 1023 aaKnown RBP7.27□□□□□ -1.25
GINS3-206ENST00000567143 COPB1P53618 953 aaKnown RBP7.27□□□□□ -1.25
GINS3-206ENST00000567143 SLC7A5Q01650 507 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 PAK1Q13153 545 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 CASP8Q14790 479 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 INF2Q27J81 1249 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 TSR1Q2NL82 804 aaKnown RBP7.27□□□□□ -1.25
GINS3-206ENST00000567143 TAF3Q5VWG9 929 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 C3orf67Q6ZVT6 689 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 APTXQ7Z2E3 356 aaKnown RBP7.27□□□□□ -1.25
GINS3-206ENST00000567143 HEATR3Q7Z4Q2 680 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 DHX37Q8IY37 1157 aaKnown RBP7.27□□□□□ -1.25
GINS3-206ENST00000567143 FBXL16Q8N461 479 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 SLC44A5Q8NCS7 719 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 GPR101Q96P66 508 aaPredicted RBP7.27□□□□□ -1.25
GINS3-206ENST00000567143 KANSL2Q9H9L4 492 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 KCND1Q9NSA2 647 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 ABHD10Q9NUJ1 306 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 SLX4Q8IY92 1834 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 IBSPP21815 317 aaPredicted RBP7.27□□□□□ -1.25
GINS3-206ENST00000567143 PRDX5P30044 214 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 KCNJ6P48051 423 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 BEND6Q5SZJ8 279 aaPredicted RBP7.27□□□□□ -1.25
GINS3-206ENST00000567143 TXLNBQ8N3L3 684 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 STAG2Q8N3U4 1231 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 ANKRD20A12PQ8NF67 263 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 MASTLQ96GX5 879 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 MMS19Q96T76 1030 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 EHD4Q9H223 541 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 FAM204AQ9H8W3 233 aa7.27□□□□□ -1.25
GINS3-206ENST00000567143 CCDC151A5D8V7 595 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 PLEKP08567 350 aaPredicted RBP7.26□□□□□ -1.25
GINS3-206ENST00000567143 ARID4AP29374 1257 aaPredicted RBP7.26□□□□□ -1.25
GINS3-206ENST00000567143 ARID5AQ03989 594 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 C2orf54Q08AI8 447 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 IL17AQ16552 155 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 C15orf52Q6ZUT6 534 aaKnown RBP7.26□□□□□ -1.25
GINS3-206ENST00000567143 HDXQ7Z353 690 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 CNGA4Q8IV77 575 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 IQUBQ8NA54 791 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 LACRTQ9GZZ8 138 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 RNF41Q9H4P4 317 aaPredicted RBP7.26□□□□□ -1.25
GINS3-206ENST00000567143 FAM207AQ9NSI2 230 aaPredicted RBP7.26□□□□□ -1.25
GINS3-206ENST00000567143 SAP30BPQ9UHR5 308 aaKnown RBP7.26□□□□□ -1.25
GINS3-206ENST00000567143 MYO6Q9UM54 1294 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 COL4A1P02462 1669 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 USP17L3A6NCW0 530 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 USP17L4A6NCW7 530 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 MYO1CO00159 1063 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms