RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CNNM2Q9H8M5 875 aa4.43□□□□□ -1.7
SMG1-212ENST00000566328 EHMT1Q9H9B1 1298 aa4.43□□□□□ -1.7
SMG1-212ENST00000566328 BRMS1Q9HCU9 246 aa4.43□□□□□ -1.7
SMG1-212ENST00000566328 VTI1BQ9UEU0 232 aa4.43□□□□□ -1.7
SMG1-212ENST00000566328 FBXL21Q9UKT6 434 aa4.43□□□□□ -1.7
SMG1-212ENST00000566328 PALD1Q9ULE6 856 aa4.43□□□□□ -1.7
SMG1-212ENST00000566328 IRS2Q9Y4H2 1338 aa4.43□□□□□ -1.7
SMG1-212ENST00000566328 A0A1W2PQJ5 194 aa4.42□□□□□ -1.7
SMG1-212ENST00000566328 VAV1P15498 845 aa4.42□□□□□ -1.7
SMG1-212ENST00000566328 NCKAP1LP55160 1127 aa4.42□□□□□ -1.7
SMG1-212ENST00000566328 KIR3DS1Q14943 382 aa4.42□□□□□ -1.7
SMG1-212ENST00000566328 ZFYVE27Q5T4F4 411 aa4.42□□□□□ -1.7
SMG1-212ENST00000566328 HLA-DQA1Q5Y7H0 255 aa4.42□□□□□ -1.7
SMG1-212ENST00000566328 SND1Q7KZF4 910 aaKnown RBP eCLIP4.42□□□□□ -1.7
SMG1-212ENST00000566328 NLRC3Q7RTR2 1065 aa4.42□□□□□ -1.7
SMG1-212ENST00000566328 JAMLQ86YT9 394 aa4.42□□□□□ -1.7
SMG1-212ENST00000566328 REXO1Q8N1G1 1221 aaKnown RBP4.42□□□□□ -1.7
SMG1-212ENST00000566328 NAT16Q8N8M0 369 aa4.42□□□□□ -1.7
SMG1-212ENST00000566328 ATG4CQ96DT6 458 aa4.42□□□□□ -1.7
SMG1-212ENST00000566328 DHRS1Q96LJ7 313 aa4.42□□□□□ -1.7
SMG1-212ENST00000566328 TMPRSS5Q9H3S3 457 aa4.42□□□□□ -1.7
SMG1-212ENST00000566328 KBTBD4Q9NVX7 518 aa4.42□□□□□ -1.7
SMG1-212ENST00000566328 MEIS1O00470 390 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 GSNP06396 782 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 GARTP22102 1010 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 IGFBP6P24592 240 aaPredicted RBP4.41□□□□□ -1.7
SMG1-212ENST00000566328 POLR2BP30876 1174 aaKnown RBP4.41□□□□□ -1.7
SMG1-212ENST00000566328 EIF4A3P38919 411 aaKnown RBP4.41□□□□□ -1.7
SMG1-212ENST00000566328 SLURP1P55000 103 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 PLEKHN1Q494U1 663 aaPredicted RBP4.41□□□□□ -1.7
SMG1-212ENST00000566328 UBXN11Q5T124 520 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 CWF19L1Q69YN2 538 aaKnown RBP4.41□□□□□ -1.7
SMG1-212ENST00000566328 FBXL19Q6PCT2 694 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 PAQR3Q6TCH7 311 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 TP53I13Q8NBR0 393 aaPredicted RBP4.41□□□□□ -1.7
SMG1-212ENST00000566328 DSCC1Q9BVC3 393 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 TRAIPQ9BWF2 469 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 KCNQ5Q9NR82 932 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 AP5S1Q9NUS5 200 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 USP40Q9NVE5 1235 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 GFOD1Q9NXC2 390 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 IMPACTQ9P2X3 320 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 MYRFQ9Y2G1 1151 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 FAN1Q9Y2M0 1017 aa4.41□□□□□ -1.7
SMG1-212ENST00000566328 K7ESM1 405 aa4.4□□□□□ -1.71
SMG1-212ENST00000566328 FFAR3O14843 346 aa4.4□□□□□ -1.71
SMG1-212ENST00000566328 SRGAP3O43295 1099 aa4.4□□□□□ -1.71
SMG1-212ENST00000566328 GREM1O60565 184 aa4.4□□□□□ -1.71
SMG1-212ENST00000566328 CYBBP04839 570 aa4.4□□□□□ -1.71
SMG1-212ENST00000566328 ZNF200P98182 395 aaPredicted RBP4.4□□□□□ -1.71
SMG1-212ENST00000566328 AUHQ13825 339 aaKnown RBP4.4□□□□□ -1.71
SMG1-212ENST00000566328 RTP5Q14D33 572 aa4.4□□□□□ -1.71
SMG1-212ENST00000566328 RGS22Q8NE09 1264 aa4.4□□□□□ -1.71
SMG1-212ENST00000566328 ZNF512BQ96KM6 892 aaPredicted RBP4.4□□□□□ -1.71
SMG1-212ENST00000566328 SLC6A18Q96N87 628 aa4.4□□□□□ -1.71
SMG1-212ENST00000566328 GPR20Q99678 358 aa4.4□□□□□ -1.71
SMG1-212ENST00000566328 ANTXR1Q9H6X2 564 aa4.4□□□□□ -1.71
SMG1-212ENST00000566328 SUSD2Q9UGT4 822 aa4.4□□□□□ -1.71
SMG1-212ENST00000566328 MINPP1Q9UNW1 487 aa4.4□□□□□ -1.71
SMG1-212ENST00000566328 MSL3P1P0C860 447 aa4.39□□□□□ -1.71
SMG1-212ENST00000566328 INSRRP14616 1297 aa4.39□□□□□ -1.71
SMG1-212ENST00000566328 NME1P15531 152 aaKnown RBP4.39□□□□□ -1.71
SMG1-212ENST00000566328 CTSKP43235 329 aa4.39□□□□□ -1.71
SMG1-212ENST00000566328 NOP2P46087 812 aaKnown RBP4.39□□□□□ -1.71
SMG1-212ENST00000566328 LIMS1P48059 325 aa4.39□□□□□ -1.71
SMG1-212ENST00000566328 ZNF165P49910 485 aa4.39□□□□□ -1.71
SMG1-212ENST00000566328 CYP2R1Q6VVX0 501 aa4.39□□□□□ -1.71
SMG1-212ENST00000566328 ERMP1Q7Z2K6 904 aa4.39□□□□□ -1.71
SMG1-212ENST00000566328 JMJD8Q96S16 334 aa4.39□□□□□ -1.71
SMG1-212ENST00000566328 RNF38Q9H0F5 515 aa4.39□□□□□ -1.71
SMG1-212ENST00000566328 TNFRSF10CO14798 259 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 PRICKLE3O43900 615 aaPredicted RBP4.38□□□□□ -1.71
SMG1-212ENST00000566328 GSTM1P09488 218 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 NCAM1P13591 858 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 MCM4P33991 863 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 CORO7P57737 925 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 FOXO4P98177 505 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 MVKQ03426 396 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 APOBRQ0VD83 1088 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 PUM1Q14671 1186 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMG1-212ENST00000566328 ZNF827Q17R98 1081 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 BICRALQ6AI39 1079 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 CRTC3Q6UUV7 619 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 HHIPL2Q6UWX4 724 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 LIPIQ6XZB0 460 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 GK5Q6ZS86 529 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 FBXO33Q7Z6M2 555 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 TMEM192Q8IY95 271 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 C7orf61Q8IZ16 206 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 TMEM52Q8NDY8 209 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 ZNF296Q8WUU4 475 aaPredicted RBP4.38□□□□□ -1.71
SMG1-212ENST00000566328 BCL11AQ9H165 835 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 PDLIM7Q9NR12 457 aa4.38□□□□□ -1.71
SMG1-212ENST00000566328 DBR1Q9UK59 544 aaKnown RBP4.38□□□□□ -1.71
SMG1-212ENST00000566328 MEIS3P2A8K0S8 358 aa4.37□□□□□ -1.71
SMG1-212ENST00000566328 TBC1D8O95759 1140 aa4.37□□□□□ -1.71
SMG1-212ENST00000566328 DBHP09172 617 aa4.37□□□□□ -1.71
SMG1-212ENST00000566328 CLCQ05315 142 aa4.37□□□□□ -1.71
SMG1-212ENST00000566328 SEZ6Q53EL9 994 aa4.37□□□□□ -1.71
SMG1-212ENST00000566328 NOL9Q5SY16 702 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms