RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 RASGRP2Q7LDG7 609 aa14.42□□□□□ -0.1
SPG7-211ENST00000565370 MSL3Q8N5Y2 521 aaKnown RBP14.42□□□□□ -0.1
SPG7-211ENST00000565370 PNMA1Q8ND90 353 aa14.42□□□□□ -0.1
SPG7-211ENST00000565370 ZKSCAN3Q9BRR0 538 aa14.42□□□□□ -0.1
SPG7-211ENST00000565370 C11orf49Q9H6J7 331 aa14.42□□□□□ -0.1
SPG7-211ENST00000565370 RNF146Q9NTX7 359 aa14.42□□□□□ -0.1
SPG7-211ENST00000565370 CCPG1Q9ULG6 757 aa14.42□□□□□ -0.1
SPG7-211ENST00000565370 CNPY2Q9Y2B0 182 aa14.42□□□□□ -0.1
SPG7-211ENST00000565370 PFASO15067 1338 aa14.41□□□□□ -0.1
SPG7-211ENST00000565370 ERICH2A1L162 156 aa14.41□□□□□ -0.1
SPG7-211ENST00000565370 ALAS1P13196 640 aa14.41□□□□□ -0.1
SPG7-211ENST00000565370 ZNF543Q08ER8 600 aa14.41□□□□□ -0.1
SPG7-211ENST00000565370 SART3Q15020 963 aaKnown RBP14.41□□□□□ -0.1
SPG7-211ENST00000565370 PAWRQ96IZ0 340 aaKnown RBP14.41□□□□□ -0.1
SPG7-211ENST00000565370 TINF2Q9BSI4 451 aa14.41□□□□□ -0.1
SPG7-211ENST00000565370 GPCPD1Q9NPB8 672 aa14.41□□□□□ -0.1
SPG7-211ENST00000565370 RIPK3Q9Y572 518 aa14.41□□□□□ -0.1
SPG7-211ENST00000565370 NR2E3Q9Y5X4 410 aa14.41□□□□□ -0.1
SPG7-211ENST00000565370 SYNGAP1Q96PV0 1343 aa14.41□□□□□ -0.1
SPG7-211ENST00000565370 SEPT4O43236 478 aa14.4□□□□□ -0.1
SPG7-211ENST00000565370 EVI5O60447 810 aa14.4□□□□□ -0.1
SPG7-211ENST00000565370 ICAM1P05362 532 aa14.4□□□□□ -0.1
SPG7-211ENST00000565370 SNHG28P0DPA3 235 aa14.4□□□□□ -0.1
SPG7-211ENST00000565370 ZNF792Q3KQV3 632 aa14.4□□□□□ -0.1
SPG7-211ENST00000565370 ASPRV1Q53RT3 343 aa14.4□□□□□ -0.1
SPG7-211ENST00000565370 IFIT1BQ5T764 474 aaKnown RBP14.4□□□□□ -0.1
SPG7-211ENST00000565370 BTNL9Q6UXG8 535 aa14.4□□□□□ -0.1
SPG7-211ENST00000565370 ZNF467Q7Z7K2 595 aaPredicted RBP14.4□□□□□ -0.1
SPG7-211ENST00000565370 ENAHQ8N8S7 591 aaPredicted RBP14.4□□□□□ -0.1
SPG7-211ENST00000565370 DIS3LQ8TF46 1054 aaKnown RBP14.4□□□□□ -0.1
SPG7-211ENST00000565370 RANBP17Q9H2T7 1088 aaKnown RBP14.4□□□□□ -0.1
SPG7-211ENST00000565370 ZNF536O15090 1300 aa14.4□□□□□ -0.1
SPG7-211ENST00000565370 KBTBD13C9JR72 458 aa14.39□□□□□ -0.11
SPG7-211ENST00000565370 POTEB2H3BUK9 544 aa14.39□□□□□ -0.11
SPG7-211ENST00000565370 IGHA2P01877 340 aa14.39□□□□□ -0.11
SPG7-211ENST00000565370 CYP21A2P08686 494 aa14.39□□□□□ -0.11
SPG7-211ENST00000565370 SLC16A2P36021 539 aa14.39□□□□□ -0.11
SPG7-211ENST00000565370 PTH1RQ03431 593 aa14.39□□□□□ -0.11
SPG7-211ENST00000565370 LHX8Q68G74 356 aa14.39□□□□□ -0.11
SPG7-211ENST00000565370 NCOA7Q8NI08 942 aa14.39□□□□□ -0.11
SPG7-211ENST00000565370 AGBL1Q96MI9 1066 aa14.39□□□□□ -0.11
SPG7-211ENST00000565370 TRERF1Q96PN7 1200 aa14.39□□□□□ -0.11
SPG7-211ENST00000565370 ZSWIM5Q9P217 1185 aa14.39□□□□□ -0.11
SPG7-211ENST00000565370 TRIOBPQ9H2D6 2365 aa14.39□□□□□ -0.11
SPG7-211ENST00000565370 WDR19Q8NEZ3 1342 aa14.39□□□□□ -0.11
SPG7-211ENST00000565370 SZT2Q5T011 3432 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 DNAJC25-GNG10A0A024R161 153 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 H0YGN5 161 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 DNM1LO00429 736 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 RARBP10826 455 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 AKR1A1P14550 325 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 ARRDC4Q8NCT1 418 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 TRPV1Q8NER1 839 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 ANKS1AQ92625 1134 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 MAP4K1Q92918 833 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 ESYT1Q9BSJ8 1104 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 ANO2Q9NQ90 1003 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 A1CFQ9NQ94 594 aaKnown RBP14.38□□□□□ -0.11
SPG7-211ENST00000565370 ZHX1Q9UKY1 873 aaPredicted RBP14.38□□□□□ -0.11
SPG7-211ENST00000565370 RBM8AQ9Y5S9 174 aaKnown RBP14.38□□□□□ -0.11
SPG7-211ENST00000565370 CEP290O15078 2479 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 LRRC37A2A6NM11 1700 aa14.38□□□□□ -0.11
SPG7-211ENST00000565370 ALPK3Q96L96 1907 aa14.37□□□□□ -0.11
SPG7-211ENST00000565370 E7EWF7 191 aa14.37□□□□□ -0.11
SPG7-211ENST00000565370 DHX16O60231 1041 aaKnown RBP14.37□□□□□ -0.11
SPG7-211ENST00000565370 CDC45O75419 566 aa14.37□□□□□ -0.11
SPG7-211ENST00000565370 CENPBP07199 599 aaPredicted RBP14.37□□□□□ -0.11
SPG7-211ENST00000565370 PARP1P09874 1014 aaKnown RBP14.37□□□□□ -0.11
SPG7-211ENST00000565370 SNAP25P60880 206 aa14.37□□□□□ -0.11
SPG7-211ENST00000565370 TTBK2Q6IQ55 1244 aa14.37□□□□□ -0.11
SPG7-211ENST00000565370 MAMDC4Q6UXC1 1216 aa14.37□□□□□ -0.11
SPG7-211ENST00000565370 NSMFQ6X4W1 530 aa14.37□□□□□ -0.11
SPG7-211ENST00000565370 ASB14A6NK59 587 aa14.36□□□□□ -0.11
SPG7-211ENST00000565370 IFIT3O14879 490 aaKnown RBP14.36□□□□□ -0.11
SPG7-211ENST00000565370 MYCNP04198 464 aaPredicted RBP14.36□□□□□ -0.11
SPG7-211ENST00000565370 MPHOSPH6Q99547 160 aaKnown RBP14.36□□□□□ -0.11
SPG7-211ENST00000565370 XPNPEP3Q9NQH7 507 aa14.36□□□□□ -0.11
SPG7-211ENST00000565370 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.36□□□□□ -0.11
SPG7-211ENST00000565370 MYH6P13533 1939 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 GOLGA8HP0CJ92 632 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 WTAPQ15007 396 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 CDC37Q16543 378 aaPredicted RBP14.35□□□□□ -0.11
SPG7-211ENST00000565370 MUM1L1Q5H9M0 696 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 PRAMEF19Q5SWL8 479 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 RNF20Q5VTR2 975 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 ANO1Q5XXA6 986 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 CYB5R4Q7L1T6 521 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 ARMCX2Q7L311 632 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 RNF180Q86T96 592 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 C7orf61Q8IZ16 206 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 FAM133AQ8N9E0 248 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 ABHD16BQ9H3Z7 469 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 CYP39A1Q9NYL5 469 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 ADD3Q9UEY8 706 aaKnown RBP14.35□□□□□ -0.11
SPG7-211ENST00000565370 FAM184BQ9ULE4 1060 aa14.35□□□□□ -0.11
SPG7-211ENST00000565370 MCM3APO60318 1980 aa14.34□□□□□ -0.11
SPG7-211ENST00000565370 PTPDC1A2A3K4 754 aa14.34□□□□□ -0.11
SPG7-211ENST00000565370 COL6A1P12109 1028 aa14.34□□□□□ -0.11
SPG7-211ENST00000565370 MNX1P50219 401 aaPredicted RBP14.34□□□□□ -0.11
SPG7-211ENST00000565370 SEC23AQ15436 765 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms