RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 HEATR6Q6AI08 1181 aaKnown RBP7.9□□□□□ -1.14
UBR1-205ENST00000564540 SIRT2Q8IXJ6 389 aa7.9□□□□□ -1.14
UBR1-205ENST00000564540 FGD4Q96M96 766 aa7.9□□□□□ -1.14
UBR1-205ENST00000564540 GPR55Q9Y2T6 319 aaPredicted RBP7.9□□□□□ -1.14
UBR1-205ENST00000564540 YBX2Q9Y2T7 364 aaKnown RBP7.9□□□□□ -1.14
UBR1-205ENST00000564540 FADS2P1A8MWK0 482 aa7.89□□□□□ -1.15
UBR1-205ENST00000564540 SMAD7O15105 426 aaKnown RBP7.89□□□□□ -1.15
UBR1-205ENST00000564540 SSBP05455 408 aaKnown RBP eCLIP7.89□□□□□ -1.15
UBR1-205ENST00000564540 GSTM1P09488 218 aa7.89□□□□□ -1.15
UBR1-205ENST00000564540 RTP1P59025 263 aa7.89□□□□□ -1.15
UBR1-205ENST00000564540 KIAA1211LQ6NV74 962 aa7.89□□□□□ -1.15
UBR1-205ENST00000564540 VHLLQ6RSH7 139 aa7.89□□□□□ -1.15
UBR1-205ENST00000564540 NLRX1Q86UT6 975 aa7.89□□□□□ -1.15
UBR1-205ENST00000564540 PLCD4Q9BRC7 762 aa7.89□□□□□ -1.15
UBR1-205ENST00000564540 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.89□□□□□ -1.15
UBR1-205ENST00000564540 CWC22Q9HCG8 908 aaKnown RBP7.89□□□□□ -1.15
UBR1-205ENST00000564540 SUSD2Q9UGT4 822 aa7.89□□□□□ -1.15
UBR1-205ENST00000564540 NRDCO43847 1150 aa7.88□□□□□ -1.15
UBR1-205ENST00000564540 KIR3DS1Q14943 382 aa7.88□□□□□ -1.15
UBR1-205ENST00000564540 ADAT2Q7Z6V5 191 aaKnown RBP7.88□□□□□ -1.15
UBR1-205ENST00000564540 KSR1Q8IVT5 923 aa7.88□□□□□ -1.15
UBR1-205ENST00000564540 TMEM52Q8NDY8 209 aa7.88□□□□□ -1.15
UBR1-205ENST00000564540 INTS4Q96HW7 963 aaKnown RBP7.88□□□□□ -1.15
UBR1-205ENST00000564540 FAM84AQ96KN4 292 aa7.88□□□□□ -1.15
UBR1-205ENST00000564540 DCP1AQ9NPI6 582 aaPredicted RBP7.88□□□□□ -1.15
UBR1-205ENST00000564540 WHRNQ9P202 907 aa7.88□□□□□ -1.15
UBR1-205ENST00000564540 TNFRSF10DQ9UBN6 386 aa7.88□□□□□ -1.15
UBR1-205ENST00000564540 SF3B6Q9Y3B4 125 aaKnown RBP7.88□□□□□ -1.15
UBR1-205ENST00000564540 CD3EP07766 207 aa7.87□□□□□ -1.15
UBR1-205ENST00000564540 FGRP09769 529 aa7.87□□□□□ -1.15
UBR1-205ENST00000564540 IFNGR1P15260 489 aa7.87□□□□□ -1.15
UBR1-205ENST00000564540 ETFBP38117 255 aa7.87□□□□□ -1.15
UBR1-205ENST00000564540 SNX17Q15036 470 aa7.87□□□□□ -1.15
UBR1-205ENST00000564540 FCRL3Q96P31 734 aaPredicted RBP7.87□□□□□ -1.15
UBR1-205ENST00000564540 GBP3Q9H0R5 595 aa7.87□□□□□ -1.15
UBR1-205ENST00000564540 EPB41L4BQ9H329 900 aa7.87□□□□□ -1.15
UBR1-205ENST00000564540 A0A087WZG4 1122 aa7.86□□□□□ -1.15
UBR1-205ENST00000564540 ENDOUP21128 410 aaKnown RBP7.86□□□□□ -1.15
UBR1-205ENST00000564540 SDHBP21912 280 aa7.86□□□□□ -1.15
UBR1-205ENST00000564540 DNAJA1P31689 397 aaKnown RBP7.86□□□□□ -1.15
UBR1-205ENST00000564540 ARID5AQ03989 594 aa7.86□□□□□ -1.15
UBR1-205ENST00000564540 HSF5Q4G112 596 aaPredicted RBP7.86□□□□□ -1.15
UBR1-205ENST00000564540 SLCO6A1Q86UG4 719 aa7.86□□□□□ -1.15
UBR1-205ENST00000564540 MCF2L2Q86YR7 1114 aa7.86□□□□□ -1.15
UBR1-205ENST00000564540 NAT16Q8N8M0 369 aa7.86□□□□□ -1.15
UBR1-205ENST00000564540 SLC38A3Q99624 504 aa7.86□□□□□ -1.15
UBR1-205ENST00000564540 MCMBPQ9BTE3 642 aa7.86□□□□□ -1.15
UBR1-205ENST00000564540 SLC6A17Q9H1V8 727 aa7.86□□□□□ -1.15
UBR1-205ENST00000564540 APEX2Q9UBZ4 518 aa7.86□□□□□ -1.15
UBR1-205ENST00000564540 DIS3Q9Y2L1 958 aaKnown RBP7.86□□□□□ -1.15
UBR1-205ENST00000564540 VAMP4O75379 141 aa7.85□□□□□ -1.15
UBR1-205ENST00000564540 PPM1BO75688 479 aa7.85□□□□□ -1.15
UBR1-205ENST00000564540 PDE6BP35913 854 aa7.85□□□□□ -1.15
UBR1-205ENST00000564540 SYDE1Q6ZW31 735 aaPredicted RBP7.85□□□□□ -1.15
UBR1-205ENST00000564540 FBXO15Q8NCQ5 510 aaPredicted RBP7.85□□□□□ -1.15
UBR1-205ENST00000564540 JMJD8Q96S16 334 aa7.85□□□□□ -1.15
UBR1-205ENST00000564540 ACTR10Q9NZ32 417 aa7.85□□□□□ -1.15
UBR1-205ENST00000564540 CGGBP1Q9UFW8 167 aaPredicted RBP7.85□□□□□ -1.15
UBR1-205ENST00000564540 TAF6LQ9Y6J9 622 aa7.85□□□□□ -1.15
UBR1-205ENST00000564540 NOP2P46087 812 aaKnown RBP7.84□□□□□ -1.15
UBR1-205ENST00000564540 POU4F1Q01851 419 aa7.84□□□□□ -1.15
UBR1-205ENST00000564540 ADGRF1Q5T601 910 aa7.84□□□□□ -1.15
UBR1-205ENST00000564540 LARP1BQ659C4 914 aaKnown RBP7.84□□□□□ -1.15
UBR1-205ENST00000564540 C6orf15Q6UXA7 325 aaPredicted RBP7.84□□□□□ -1.15
UBR1-205ENST00000564540 ZNF605Q86T29 641 aa7.84□□□□□ -1.15
UBR1-205ENST00000564540 IRF2BP1Q8IU81 584 aa7.84□□□□□ -1.15
UBR1-205ENST00000564540 ZNF513Q8N8E2 541 aaPredicted RBP7.84□□□□□ -1.15
UBR1-205ENST00000564540 ZNF408Q9H9D4 720 aa7.84□□□□□ -1.15
UBR1-205ENST00000564540 SUGT1Q9Y2Z0 365 aa7.84□□□□□ -1.15
UBR1-205ENST00000564540 ANKRD34BA5PLL1 514 aa7.83□□□□□ -1.16
UBR1-205ENST00000564540 WTIPA6NIX2 430 aaPredicted RBP7.83□□□□□ -1.16
UBR1-205ENST00000564540 B2RBV5 119 aa7.83□□□□□ -1.16
UBR1-205ENST00000564540 STXBP3O00186 592 aa7.83□□□□□ -1.16
UBR1-205ENST00000564540 FGF10O15520 208 aaPredicted RBP7.83□□□□□ -1.16
UBR1-205ENST00000564540 PRKCAP17252 672 aa7.83□□□□□ -1.16
UBR1-205ENST00000564540 PKN1Q16512 942 aa7.83□□□□□ -1.16
UBR1-205ENST00000564540 DPY19L1Q2PZI1 675 aa7.83□□□□□ -1.16
UBR1-205ENST00000564540 TNNI3KQ59H18 835 aa7.83□□□□□ -1.16
UBR1-205ENST00000564540 GALNT18Q6P9A2 607 aa7.83□□□□□ -1.16
UBR1-205ENST00000564540 ARHGEF39Q8N4T4 335 aa7.83□□□□□ -1.16
UBR1-205ENST00000564540 LGR4Q9BXB1 951 aa7.83□□□□□ -1.16
UBR1-205ENST00000564540 PRKAG3Q9UGI9 489 aa7.83□□□□□ -1.16
UBR1-205ENST00000564540 A0A1W2PQ45 241 aaPredicted RBP7.82□□□□□ -1.16
UBR1-205ENST00000564540 A0A1W2PQY0 241 aa7.82□□□□□ -1.16
UBR1-205ENST00000564540 KRT1P04264 644 aa7.82□□□□□ -1.16
UBR1-205ENST00000564540 MICAL1Q8TDZ2 1067 aa7.82□□□□□ -1.16
UBR1-205ENST00000564540 CRTAC1Q9NQ79 661 aa7.82□□□□□ -1.16
UBR1-205ENST00000564540 IMPACTQ9P2X3 320 aa7.82□□□□□ -1.16
UBR1-205ENST00000564540 MYOCOSA0A1B0GUC4 107 aa7.81□□□□□ -1.16
UBR1-205ENST00000564540 PNLIPP16233 465 aa7.81□□□□□ -1.16
UBR1-205ENST00000564540 NCAPHQ15003 741 aa7.81□□□□□ -1.16
UBR1-205ENST00000564540 SLC43A3Q8NBI5 491 aa7.81□□□□□ -1.16
UBR1-205ENST00000564540 NUP43Q8NFH3 380 aa7.81□□□□□ -1.16
UBR1-205ENST00000564540 RCC1LQ96I51 464 aaKnown RBP7.81□□□□□ -1.16
UBR1-205ENST00000564540 PTCHD1Q96NR3 888 aa7.81□□□□□ -1.16
UBR1-205ENST00000564540 MCOLN1Q9GZU1 580 aa7.81□□□□□ -1.16
UBR1-205ENST00000564540 ZNF552Q9H707 407 aaPredicted RBP7.81□□□□□ -1.16
UBR1-205ENST00000564540 OR14I1A6ND48 311 aa7.8□□□□□ -1.16
UBR1-205ENST00000564540 AURKAO14965 403 aa7.8□□□□□ -1.16
UBR1-205ENST00000564540 MSL3P1P0C860 447 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms