RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 HPXP02790 462 aa9.36□□□□□ -0.91
SMG1-204ENST00000561940 GALK1P51570 392 aa9.36□□□□□ -0.91
SMG1-204ENST00000561940 TIGD5Q53EQ6 642 aa9.36□□□□□ -0.91
SMG1-204ENST00000561940 FAM178BQ8IXR5 827 aa9.36□□□□□ -0.91
SMG1-204ENST00000561940 FIBCD1Q8N539 461 aa9.36□□□□□ -0.91
SMG1-204ENST00000561940 PDZD8Q8NEN9 1154 aa9.36□□□□□ -0.91
SMG1-204ENST00000561940 CDADC1Q9BWV3 514 aa9.36□□□□□ -0.91
SMG1-204ENST00000561940 ZNF503-AS2A6NEH8 195 aa9.35□□□□□ -0.91
SMG1-204ENST00000561940 EPHX1P07099 455 aa9.35□□□□□ -0.91
SMG1-204ENST00000561940 ITGA4P13612 1032 aa9.35□□□□□ -0.91
SMG1-204ENST00000561940 VAV1P15498 845 aa9.35□□□□□ -0.91
SMG1-204ENST00000561940 OXR1Q8N573 874 aa9.35□□□□□ -0.91
SMG1-204ENST00000561940 ZDHHC15Q96MV8 337 aa9.35□□□□□ -0.91
SMG1-204ENST00000561940 G6PC3Q9BUM1 346 aa9.35□□□□□ -0.91
SMG1-204ENST00000561940 CCDC113Q9H0I3 377 aa9.35□□□□□ -0.91
SMG1-204ENST00000561940 SP110Q9HB58 689 aa9.35□□□□□ -0.91
SMG1-204ENST00000561940 AP5S1Q9NUS5 200 aa9.35□□□□□ -0.91
SMG1-204ENST00000561940 PDPK1O15530 556 aa9.34□□□□□ -0.91
SMG1-204ENST00000561940 USP2O75604 605 aaPredicted RBP9.34□□□□□ -0.91
SMG1-204ENST00000561940 GSNP06396 782 aa9.34□□□□□ -0.91
SMG1-204ENST00000561940 GLI1P08151 1106 aa9.34□□□□□ -0.91
SMG1-204ENST00000561940 DUSP4Q13115 394 aa9.34□□□□□ -0.91
SMG1-204ENST00000561940 CWF19L1Q69YN2 538 aaKnown RBP9.34□□□□□ -0.91
SMG1-204ENST00000561940 SDE2Q6IQ49 451 aa9.34□□□□□ -0.91
SMG1-204ENST00000561940 MPZL3Q6UWV2 235 aa9.34□□□□□ -0.91
SMG1-204ENST00000561940 SIRT2Q8IXJ6 389 aa9.34□□□□□ -0.91
SMG1-204ENST00000561940 LINC01599Q8WXQ3 324 aa9.34□□□□□ -0.91
SMG1-204ENST00000561940 DNAJC7Q99615 494 aa9.34□□□□□ -0.91
SMG1-204ENST00000561940 KANSL2Q9H9L4 492 aa9.34□□□□□ -0.91
SMG1-204ENST00000561940 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMG1-204ENST00000561940 ZNF281Q9Y2X9 895 aa9.34□□□□□ -0.91
SMG1-204ENST00000561940 GSTM1P09488 218 aa9.33□□□□□ -0.92
SMG1-204ENST00000561940 BMP8BP34820 402 aa9.33□□□□□ -0.92
SMG1-204ENST00000561940 RNF32Q9H0A6 362 aa9.33□□□□□ -0.92
SMG1-204ENST00000561940 KLHL25Q9H0H3 589 aa9.33□□□□□ -0.92
SMG1-204ENST00000561940 PRR13Q9NZ81 148 aa9.33□□□□□ -0.92
SMG1-204ENST00000561940 FHOD1Q9Y613 1164 aa9.33□□□□□ -0.92
SMG1-204ENST00000561940 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.32□□□□□ -0.92
SMG1-204ENST00000561940 PSPNO60542 156 aa9.32□□□□□ -0.92
SMG1-204ENST00000561940 RASGRF1Q13972 1273 aa9.32□□□□□ -0.92
SMG1-204ENST00000561940 MLANAQ16655 118 aa9.32□□□□□ -0.92
SMG1-204ENST00000561940 SPPL2CQ8IUH8 684 aa9.32□□□□□ -0.92
SMG1-204ENST00000561940 LILRB2Q8N423 598 aa9.32□□□□□ -0.92
SMG1-204ENST00000561940 MAP6Q96JE9 813 aa9.32□□□□□ -0.92
SMG1-204ENST00000561940 RNPC3Q96LT9 517 aaKnown RBP9.32□□□□□ -0.92
SMG1-204ENST00000561940 GPR160Q9UJ42 338 aa9.32□□□□□ -0.92
SMG1-204ENST00000561940 SUGT1Q9Y2Z0 365 aa9.32□□□□□ -0.92
SMG1-204ENST00000561940 FITM1A5D6W6 292 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 LRRC10BA6NIK2 292 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 VAMP4O75379 141 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 ZNF205O95201 554 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 SLC14A2Q15849 920 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 RTP2Q5QGT7 225 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 OGFOD2Q6N063 350 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 PRR23BQ6ZRT6 265 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 CEP128Q6ZU80 1094 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 SPATC1Q76KD6 591 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 LRP10Q7Z4F1 713 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 ANKS4BQ8N8V4 417 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 HHIPL1Q96JK4 782 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 FMNL2Q96PY5 1086 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 SLC12A9Q9BXP2 914 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 GBP3Q9H0R5 595 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 KCNK12Q9HB15 430 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 WHRNQ9P202 907 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 SUSD2Q9UGT4 822 aa9.31□□□□□ -0.92
SMG1-204ENST00000561940 DIAPH1O60610 1272 aaKnown RBP9.3□□□□□ -0.92
SMG1-204ENST00000561940 PPM1BO75688 479 aa9.3□□□□□ -0.92
SMG1-204ENST00000561940 CD3EP07766 207 aa9.3□□□□□ -0.92
SMG1-204ENST00000561940 DPY19L1Q2PZI1 675 aa9.3□□□□□ -0.92
SMG1-204ENST00000561940 MTERF2Q49AM1 385 aa9.3□□□□□ -0.92
SMG1-204ENST00000561940 PPP1R14AQ96A00 147 aa9.3□□□□□ -0.92
SMG1-204ENST00000561940 DIRC2Q96SL1 478 aa9.3□□□□□ -0.92
SMG1-204ENST00000561940 PFDN2Q9UHV9 154 aa9.3□□□□□ -0.92
SMG1-204ENST00000561940 SF3B6Q9Y3B4 125 aaKnown RBP9.3□□□□□ -0.92
SMG1-204ENST00000561940 EFEMP2O95967 443 aa9.29□□□□□ -0.92
SMG1-204ENST00000561940 IFNGR1P15260 489 aa9.29□□□□□ -0.92
SMG1-204ENST00000561940 CHRNEQ04844 493 aa9.29□□□□□ -0.92
SMG1-204ENST00000561940 IFRD2Q12894 506 aaPredicted RBP9.29□□□□□ -0.92
SMG1-204ENST00000561940 KIR3DS1Q14943 382 aa9.29□□□□□ -0.92
SMG1-204ENST00000561940 ZNF662Q6ZS27 426 aa9.29□□□□□ -0.92
SMG1-204ENST00000561940 SH3TC2Q8TF17 1288 aa9.29□□□□□ -0.92
SMG1-204ENST00000561940 FCRL3Q96P31 734 aaPredicted RBP9.29□□□□□ -0.92
SMG1-204ENST00000561940 LGR4Q9BXB1 951 aa9.29□□□□□ -0.92
SMG1-204ENST00000561940 ERVK13-1Q9NX77 482 aa9.29□□□□□ -0.92
SMG1-204ENST00000561940 APEX2Q9UBZ4 518 aa9.29□□□□□ -0.92
SMG1-204ENST00000561940 DIS3Q9Y2L1 958 aaKnown RBP9.29□□□□□ -0.92
SMG1-204ENST00000561940 NOTOA8MTQ0 251 aa9.28□□□□□ -0.92
SMG1-204ENST00000561940 TXKP42681 527 aa9.28□□□□□ -0.92
SMG1-204ENST00000561940 ZNF648Q5T619 568 aaPredicted RBP9.28□□□□□ -0.92
SMG1-204ENST00000561940 NAT16Q8N8M0 369 aa9.28□□□□□ -0.92
SMG1-204ENST00000561940 FCRL2Q96LA5 508 aaPredicted RBP9.28□□□□□ -0.92
SMG1-204ENST00000561940 APBA2Q99767 749 aa9.28□□□□□ -0.92
SMG1-204ENST00000561940 GPR55Q9Y2T6 319 aaPredicted RBP9.28□□□□□ -0.92
SMG1-204ENST00000561940 A0A087WZG4 1122 aa9.27□□□□□ -0.93
SMG1-204ENST00000561940 ANKRD34BA5PLL1 514 aa9.27□□□□□ -0.93
SMG1-204ENST00000561940 SUSD5O60279 629 aa9.27□□□□□ -0.93
SMG1-204ENST00000561940 NOP2P46087 812 aaKnown RBP9.27□□□□□ -0.93
SMG1-204ENST00000561940 RTP1P59025 263 aa9.27□□□□□ -0.93
SMG1-204ENST00000561940 POU4F1Q01851 419 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms