RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 TMEM132BQ14DG7 1078 aa18.21■□□□□ 0.51
SPG7-204ENST00000561911 FAM110CQ1W6H9 321 aa18.21■□□□□ 0.51
SPG7-204ENST00000561911 QRICH1Q2TAL8 776 aa18.21■□□□□ 0.51
SPG7-204ENST00000561911 C17orf99Q6UX52 265 aa18.21■□□□□ 0.51
SPG7-204ENST00000561911 HSCBQ8IWL3 235 aa18.21■□□□□ 0.51
SPG7-204ENST00000561911 ANKRD13CQ8N6S4 541 aa18.21■□□□□ 0.51
SPG7-204ENST00000561911 JMYQ8N9B5 988 aa18.21■□□□□ 0.51
SPG7-204ENST00000561911 PIBF1Q8WXW3 757 aa18.21■□□□□ 0.51
SPG7-204ENST00000561911 PHKBQ93100 1093 aa18.21■□□□□ 0.51
SPG7-204ENST00000561911 RAVER2Q9HCJ3 691 aaKnown RBP18.21■□□□□ 0.51
SPG7-204ENST00000561911 WBP1LQ9NX94 342 aa18.21■□□□□ 0.51
SPG7-204ENST00000561911 ZNF214Q9UL59 606 aaPredicted RBP18.21■□□□□ 0.51
SPG7-204ENST00000561911 RLFQ13129 1914 aa18.2■□□□□ 0.5
SPG7-204ENST00000561911 PNMA6FA0A0J9YX94 578 aa18.2■□□□□ 0.5
SPG7-204ENST00000561911 K7ELQ4 463 aaPredicted RBP18.2■□□□□ 0.5
SPG7-204ENST00000561911 ATP2A1O14983 1001 aa18.2■□□□□ 0.5
SPG7-204ENST00000561911 CTDNEP1O95476 244 aa18.2■□□□□ 0.5
SPG7-204ENST00000561911 ERVK-9P63128 1117 aa18.2■□□□□ 0.5
SPG7-204ENST00000561911 ERVK-24P63145 666 aa18.2■□□□□ 0.5
SPG7-204ENST00000561911 CPXCR1Q8N123 301 aa18.2■□□□□ 0.5
SPG7-204ENST00000561911 GPRC5AQ8NFJ5 357 aa18.2■□□□□ 0.5
SPG7-204ENST00000561911 TEX13BQ9BXU2 312 aa18.2■□□□□ 0.5
SPG7-204ENST00000561911 SPATC1LQ9H0A9 340 aa18.2■□□□□ 0.5
SPG7-204ENST00000561911 SEC63Q9UGP8 760 aaKnown RBP18.2■□□□□ 0.5
SPG7-204ENST00000561911 V9GY48 417 aaPredicted RBP18.2■□□□□ 0.5
SPG7-204ENST00000561911 ZNF536O15090 1300 aa18.2■□□□□ 0.5
SPG7-204ENST00000561911 hCG_1642624A0A1W2PR95 340 aa18.19■□□□□ 0.5
SPG7-204ENST00000561911 PRPF3O43395 683 aaKnown RBP18.19■□□□□ 0.5
SPG7-204ENST00000561911 PPFIA3O75145 1194 aa18.19■□□□□ 0.5
SPG7-204ENST00000561911 ICAM1P05362 532 aa18.19■□□□□ 0.5
SPG7-204ENST00000561911 STAT3P40763 770 aa18.19■□□□□ 0.5
SPG7-204ENST00000561911 PLS1Q14651 629 aa18.19■□□□□ 0.5
SPG7-204ENST00000561911 TRIM22Q8IYM9 498 aa18.19■□□□□ 0.5
SPG7-204ENST00000561911 NSUN7Q8NE18 718 aaKnown RBP18.19■□□□□ 0.5
SPG7-204ENST00000561911 SLC26A6Q9BXS9 759 aa18.19■□□□□ 0.5
SPG7-204ENST00000561911 RNF26Q9BY78 433 aaPredicted RBP18.19■□□□□ 0.5
SPG7-204ENST00000561911 RBM27Q9P2N5 1060 aaKnown RBP18.19■□□□□ 0.5
SPG7-204ENST00000561911 PNMA2Q9UL42 364 aa18.19■□□□□ 0.5
SPG7-204ENST00000561911 A0A0G2JMZ2 1700 aa18.18■□□□□ 0.5
SPG7-204ENST00000561911 PPP1R11O60927 126 aaPredicted RBP18.18■□□□□ 0.5
SPG7-204ENST00000561911 FMNL1O95466 1100 aaPredicted RBP18.18■□□□□ 0.5
SPG7-204ENST00000561911 AKAP17AQ02040 695 aaKnown RBP18.18■□□□□ 0.5
SPG7-204ENST00000561911 SSRP1Q08945 709 aaKnown RBP18.18■□□□□ 0.5
SPG7-204ENST00000561911 Q3C1V9 767 aa18.18■□□□□ 0.5
SPG7-204ENST00000561911 SNRNP48Q6IEG0 339 aaKnown RBP18.18■□□□□ 0.5
SPG7-204ENST00000561911 FBXO11Q86XK2 927 aa18.18■□□□□ 0.5
SPG7-204ENST00000561911 RIOX2Q8IUF8 465 aa18.18■□□□□ 0.5
SPG7-204ENST00000561911 AGBL1Q96MI9 1066 aa18.18■□□□□ 0.5
SPG7-204ENST00000561911 LLPHQ9BRT6 129 aaKnown RBP18.18■□□□□ 0.5
SPG7-204ENST00000561911 MOV10L1Q9BXT6 1211 aaKnown RBP18.18■□□□□ 0.5
SPG7-204ENST00000561911 CCPG1Q9ULG6 757 aa18.18■□□□□ 0.5
SPG7-204ENST00000561911 PTPDC1A2A3K4 754 aa18.17■□□□□ 0.5
SPG7-204ENST00000561911 TAL1P17542 331 aaPredicted RBP18.17■□□□□ 0.5
SPG7-204ENST00000561911 CCNA1P78396 465 aa18.17■□□□□ 0.5
SPG7-204ENST00000561911 AMNQ9BXJ7 453 aa18.17■□□□□ 0.5
SPG7-204ENST00000561911 STK36Q9NRP7 1315 aa18.17■□□□□ 0.5
SPG7-204ENST00000561911 PARP14Q460N5 1801 aa18.16■□□□□ 0.5
SPG7-204ENST00000561911 JAK2O60674 1132 aa18.16■□□□□ 0.5
SPG7-204ENST00000561911 DTNBO60941 627 aa18.16■□□□□ 0.5
SPG7-204ENST00000561911 COPB2P35606 906 aa18.16■□□□□ 0.5
SPG7-204ENST00000561911 SLC4A3P48751 1232 aa18.16■□□□□ 0.5
SPG7-204ENST00000561911 TRAF1Q13077 416 aa18.16■□□□□ 0.5
SPG7-204ENST00000561911 CUL4AQ13619 759 aa18.16■□□□□ 0.5
SPG7-204ENST00000561911 USH1GQ495M9 461 aa18.16■□□□□ 0.5
SPG7-204ENST00000561911 SHCBP1Q8NEM2 672 aa18.16■□□□□ 0.5
SPG7-204ENST00000561911 TSHZ2Q9NRE2 1034 aa18.16■□□□□ 0.5
SPG7-204ENST00000561911 RIPK3Q9Y572 518 aa18.16■□□□□ 0.5
SPG7-204ENST00000561911 CEP350Q5VT06 3117 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 GPR25O00155 361 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 DEXIO95424 95 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 SLC25A27O95847 323 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 ALAS1P13196 640 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 SCG2P13521 617 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 ERCC3P19447 782 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 PKN1Q16512 942 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 PFKFB3Q16875 520 aaPredicted RBP18.15■□□□□ 0.5
SPG7-204ENST00000561911 TKFCQ3LXA3 575 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
SPG7-204ENST00000561911 HEATR3Q7Z4Q2 680 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 SMARCC2Q8TAQ2 1214 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 DDX11Q96FC9 970 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 PORCNQ9H237 461 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 RNF146Q9NTX7 359 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 ORC3Q9UBD5 711 aaPredicted RBP18.15■□□□□ 0.5
SPG7-204ENST00000561911 TSKSQ9UJT2 592 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 PCDHA1Q9Y5I3 950 aa18.15■□□□□ 0.5
SPG7-204ENST00000561911 hCG_1984214I3L0E3 225 aa18.14■□□□□ 0.49
SPG7-204ENST00000561911 FDPSP14324 419 aaKnown RBP18.14■□□□□ 0.49
SPG7-204ENST00000561911 HMGN5P82970 282 aaKnown RBP18.14■□□□□ 0.49
SPG7-204ENST00000561911 SP3Q02447 781 aa18.14■□□□□ 0.49
SPG7-204ENST00000561911 WWC2Q6AWC2 1192 aa18.14■□□□□ 0.49
SPG7-204ENST00000561911 NCAPG2Q86XI2 1143 aa18.14■□□□□ 0.49
SPG7-204ENST00000561911 CCAR1Q8IX12 1150 aaKnown RBP18.14■□□□□ 0.49
SPG7-204ENST00000561911 ZNF713Q8N859 430 aaPredicted RBP18.14■□□□□ 0.49
SPG7-204ENST00000561911 GPKOWQ92917 476 aaPredicted RBP eCLIP18.14■□□□□ 0.49
SPG7-204ENST00000561911 COA7Q96BR5 231 aa18.14■□□□□ 0.49
SPG7-204ENST00000561911 TRERF1Q96PN7 1200 aa18.14■□□□□ 0.49
SPG7-204ENST00000561911 MROH8Q9H579 483 aa18.14■□□□□ 0.49
SPG7-204ENST00000561911 HOMER2Q9NSB8 354 aa18.14■□□□□ 0.49
SPG7-204ENST00000561911 ABCB11O95342 1321 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms