RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 DUSP23Q9BVJ7 150 aa5.49□□□□□ -1.53
HERC1-211ENST00000560983 TNKS2Q9H2K2 1166 aa5.49□□□□□ -1.53
HERC1-211ENST00000560983 PPP4R2Q9NY27 417 aa5.49□□□□□ -1.53
HERC1-211ENST00000560983 VAV3Q9UKW4 847 aa5.49□□□□□ -1.53
HERC1-211ENST00000560983 PALLDQ8WX93 1383 aa5.49□□□□□ -1.53
HERC1-211ENST00000560983 QRICH2Q9H0J4 1663 aa5.49□□□□□ -1.53
HERC1-211ENST00000560983 LY75O60449 1722 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 KIAA1551Q9HCM1 1747 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 PNMA6FA0A0J9YX94 578 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 LEFTY1O75610 366 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 HCLS1P14317 486 aaPredicted RBP5.48□□□□□ -1.53
HERC1-211ENST00000560983 BMP6P22004 513 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 PRKCQQ04759 706 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 FMR1Q06787 632 aaKnown RBP eCLIP5.48□□□□□ -1.53
HERC1-211ENST00000560983 ITPK1Q13572 414 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.48□□□□□ -1.53
HERC1-211ENST00000560983 MPRIPQ6WCQ1 1025 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 FAM181AQ8N9Y4 354 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 GPBAR1Q8TDU6 330 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 FBF1Q8TES7 1133 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 KCNB2Q92953 911 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 EMILIN2Q9BXX0 1053 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 SRCIN1Q9C0H9 1055 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 PLAGL2Q9UPG8 496 aa5.48□□□□□ -1.53
HERC1-211ENST00000560983 MKI67P46013 3256 aaKnown RBP5.48□□□□□ -1.53
HERC1-211ENST00000560983 PDE4DIPQ5VU43 2346 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 ENC1O14682 589 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 CEACAM5P06731 702 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 CD8BP10966 210 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 GYS1P13807 737 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 FXR1P51114 621 aaKnown RBP eCLIP5.47□□□□□ -1.53
HERC1-211ENST00000560983 PLCB3Q01970 1234 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 BNIP3Q12983 259 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 IFI16Q16666 785 aaKnown RBP5.47□□□□□ -1.53
HERC1-211ENST00000560983 ZNF792Q3KQV3 632 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 SCARA3Q6AZY7 606 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 LDHDQ86WU2 507 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 GCC1Q96CN9 775 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 GPR101Q96P66 508 aaPredicted RBP5.47□□□□□ -1.53
HERC1-211ENST00000560983 PPM1HQ9ULR3 514 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.47□□□□□ -1.53
HERC1-211ENST00000560983 NFAT5O94916 1531 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 USP54Q70EL1 1684 aa5.47□□□□□ -1.53
HERC1-211ENST00000560983 TNRC6CQ9HCJ0 1690 aaKnown RBP5.47□□□□□ -1.53
HERC1-211ENST00000560983 DDNO94850 711 aaPredicted RBP5.46□□□□□ -1.54
HERC1-211ENST00000560983 JAG1P78504 1218 aa5.46□□□□□ -1.54
HERC1-211ENST00000560983 PLCL1Q15111 1095 aa5.46□□□□□ -1.54
HERC1-211ENST00000560983 ATG4DQ86TL0 474 aaPredicted RBP5.46□□□□□ -1.54
HERC1-211ENST00000560983 PIGBQ92521 554 aa5.46□□□□□ -1.54
HERC1-211ENST00000560983 SMARCC1Q92922 1105 aaPredicted RBP5.46□□□□□ -1.54
HERC1-211ENST00000560983 HEXIM2Q96MH2 286 aaKnown RBP5.46□□□□□ -1.54
HERC1-211ENST00000560983 OSBPL7Q9BZF2 842 aa5.46□□□□□ -1.54
HERC1-211ENST00000560983 TAF1DQ9H5J8 278 aaPredicted RBP5.46□□□□□ -1.54
HERC1-211ENST00000560983 MBNL3Q9NUK0 354 aaKnown RBP5.46□□□□□ -1.54
HERC1-211ENST00000560983 TOGARAM1Q9Y4F4 1720 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 IGF2BP3O00425 579 aaKnown RBP eCLIP5.45□□□□□ -1.54
HERC1-211ENST00000560983 PAGE1O75459 146 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 RNASE1P07998 156 aaKnown RBP5.45□□□□□ -1.54
HERC1-211ENST00000560983 GSTT1P30711 240 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 DDR1Q08345 913 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 MAP1SQ66K74 1059 aaPredicted RBP5.45□□□□□ -1.54
HERC1-211ENST00000560983 CYP4F22Q6NT55 531 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 ERICH6Q7L0X2 663 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 CNTROBQ8N137 903 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 IP6K1Q92551 441 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 LTV1Q96GA3 475 aaPredicted RBP5.45□□□□□ -1.54
HERC1-211ENST00000560983 CAPNS2Q96L46 248 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 ARID3AQ99856 593 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 ADAMTS6Q9UKP5 1117 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 AKAP2Q9Y2D5 859 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 SNX11Q9Y5W9 270 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 TTC21AQ8NDW8 1320 aa5.45□□□□□ -1.54
HERC1-211ENST00000560983 N4BP2Q86UW6 1770 aaPredicted RBP5.44□□□□□ -1.54
HERC1-211ENST00000560983 ARID1BQ8NFD5 2236 aaPredicted RBP5.44□□□□□ -1.54
HERC1-211ENST00000560983 USP31Q70CQ4 1352 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 PIK3C2AO00443 1686 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 TMEM265A0A087WTH1 108 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 GIPC1O14908 333 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 RNGTTO60942 597 aaKnown RBP5.44□□□□□ -1.54
HERC1-211ENST00000560983 C8AP07357 584 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 C4BP0C0L5 1744 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 MAPK1P28482 360 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 TM4SF1P30408 202 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 MAP2K2P36507 400 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 FZD5Q13467 585 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 ITSN1Q15811 1721 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 RASIP1Q5U651 963 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 PKD1L3Q7Z443 1732 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 UBE3DQ7Z6J8 389 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 TOP6BLQ8N6T0 577 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 GRIN3AQ8TCU5 1115 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 ASB16Q96NS5 453 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 CEP44Q9C0F1 390 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 BIN2Q9UBW5 565 aaPredicted RBP5.44□□□□□ -1.54
HERC1-211ENST00000560983 ABT1Q9ULW3 272 aaKnown RBP5.44□□□□□ -1.54
HERC1-211ENST00000560983 KIF13BQ9NQT8 1826 aa5.44□□□□□ -1.54
HERC1-211ENST00000560983 RGPD5Q99666 1765 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 FANCGO15287 622 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 CYP27B1O15528 508 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 CA12O43570 354 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms