RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 ITIH6Q6UXX5 1313 aa16.47■□□□□ 0.23
CRTC3-210ENST00000560927 KLRC4O43908 158 aa16.47■□□□□ 0.23
CRTC3-210ENST00000560927 PARP1P09874 1014 aaKnown RBP16.47■□□□□ 0.23
CRTC3-210ENST00000560927 IRF2BP1Q8IU81 584 aa16.47■□□□□ 0.23
CRTC3-210ENST00000560927 ADSSL1Q8N142 457 aa16.47■□□□□ 0.23
CRTC3-210ENST00000560927 UBXN4Q92575 508 aa16.47■□□□□ 0.23
CRTC3-210ENST00000560927 LZTS2Q9BRK4 669 aa16.47■□□□□ 0.23
CRTC3-210ENST00000560927 NAA15Q9BXJ9 866 aaKnown RBP16.47■□□□□ 0.23
CRTC3-210ENST00000560927 SRRTQ9BXP5 876 aaKnown RBP16.47■□□□□ 0.23
CRTC3-210ENST00000560927 ZNF287Q9HBT7 754 aa16.47■□□□□ 0.23
CRTC3-210ENST00000560927 SMCO2A6NFE2 343 aa16.46■□□□□ 0.23
CRTC3-210ENST00000560927 CLCN6P51797 869 aa16.46■□□□□ 0.23
CRTC3-210ENST00000560927 LETM2Q2VYF4 491 aa16.46■□□□□ 0.23
CRTC3-210ENST00000560927 TBC1D16Q8TBP0 767 aa16.46■□□□□ 0.23
CRTC3-210ENST00000560927 GJD4Q96KN9 370 aaPredicted RBP16.46■□□□□ 0.23
CRTC3-210ENST00000560927 CCSER1Q9C0I3 900 aa16.46■□□□□ 0.23
CRTC3-210ENST00000560927 EPC1Q9H2F5 836 aa16.46■□□□□ 0.23
CRTC3-210ENST00000560927 ST5P78524 1137 aa16.46■□□□□ 0.23
CRTC3-210ENST00000560927 CNGA4Q8IV77 575 aa16.46■□□□□ 0.23
CRTC3-210ENST00000560927 RBM17Q96I25 401 aaKnown RBP16.46■□□□□ 0.23
CRTC3-210ENST00000560927 PIGSQ96S52 555 aa16.46■□□□□ 0.23
CRTC3-210ENST00000560927 UBA5Q9GZZ9 404 aa16.46■□□□□ 0.23
CRTC3-210ENST00000560927 KBTBD4Q9NVX7 518 aa16.46■□□□□ 0.23
CRTC3-210ENST00000560927 MRFAP1Q9Y605 127 aa16.46■□□□□ 0.23
CRTC3-210ENST00000560927 USP17L5A8MUK1 530 aa16.45■□□□□ 0.22
CRTC3-210ENST00000560927 CCNT1O60563 726 aaKnown RBP16.45■□□□□ 0.22
CRTC3-210ENST00000560927 ADRA2BP18089 450 aa16.45■□□□□ 0.22
CRTC3-210ENST00000560927 ERVK-24P63145 666 aa16.45■□□□□ 0.22
CRTC3-210ENST00000560927 SPAG1Q07617 926 aa16.45■□□□□ 0.22
CRTC3-210ENST00000560927 TXNRD1Q16881 649 aa16.45■□□□□ 0.22
CRTC3-210ENST00000560927 CCDC12Q8WUD4 166 aaPredicted RBP16.45■□□□□ 0.22
CRTC3-210ENST00000560927 ABHD10Q9NUJ1 306 aa16.45■□□□□ 0.22
CRTC3-210ENST00000560927 FAM53CQ9NYF3 392 aa16.45■□□□□ 0.22
CRTC3-210ENST00000560927 EFCAB8A8MWE9 144 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 LAD1O00515 517 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 PLCG1P19174 1290 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 FECHP22830 423 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 PRPHP41219 470 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 NONOQ15233 471 aaKnown RBP eCLIP16.44■□□□□ 0.22
CRTC3-210ENST00000560927 CERS3Q8IU89 383 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 ACRBPQ8NEB7 543 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 RRP36Q96EU6 259 aaKnown RBP16.44■□□□□ 0.22
CRTC3-210ENST00000560927 FAM163AQ96GL9 167 aaPredicted RBP16.44■□□□□ 0.22
CRTC3-210ENST00000560927 GAKO14976 1311 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 C6orf229H3BNL8 230 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 ABL1P00519 1130 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 OR52Z1P0C646 297 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 PLCG2P16885 1265 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 DDR1Q08345 913 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 DMTNQ08495 405 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 KCNB1Q14721 858 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 KRT25Q7Z3Z0 450 aa16.44■□□□□ 0.22
CRTC3-210ENST00000560927 NUP88Q99567 741 aaPredicted RBP16.44■□□□□ 0.22
CRTC3-210ENST00000560927 FRMPD2Q68DX3 1309 aaPredicted RBP16.44■□□□□ 0.22
CRTC3-210ENST00000560927 H7C1D1 291 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 UBXN1Q04323 297 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 PPP2R3AQ06190 1150 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 PICALMQ13492 652 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 CABP7Q86V35 215 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 CLEC10AQ8IUN9 316 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 CCDC51Q96ER9 411 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 C6orf50Q9HD87 102 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 TMEM260Q9NX78 707 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 PODXL2Q9NZ53 605 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 BIN2Q9UBW5 565 aaPredicted RBP16.43■□□□□ 0.22
CRTC3-210ENST00000560927 SEC63Q9UGP8 760 aaKnown RBP16.43■□□□□ 0.22
CRTC3-210ENST00000560927 DAGLAQ9Y4D2 1042 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 BBOX1O75936 387 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 RHOBTB3O94955 611 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 GTF2IP78347 998 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 JAKMIP3Q5VZ66 844 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 GIMAP8Q8ND71 665 aaPredicted RBP16.43■□□□□ 0.22
CRTC3-210ENST00000560927 ANKRD20A12PQ8NF67 263 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 TBCKQ8TEA7 893 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 EEF2KMTQ96G04 330 aa16.43■□□□□ 0.22
CRTC3-210ENST00000560927 TPM1P09493 284 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 GNA11P29992 359 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 TECP42680 631 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 NOVP48745 357 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 EIF6P56537 245 aaKnown RBP16.42■□□□□ 0.22
CRTC3-210ENST00000560927 NEK8Q86SG6 692 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 SEPT12Q8IYM1 358 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 KRT222Q8N1A0 295 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 PRDM4Q9UKN5 801 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 UBR3Q6ZT12 1888 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 MYH1P12882 1939 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 MYH8P13535 1937 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 F8W031 263 aaPredicted RBP16.42■□□□□ 0.22
CRTC3-210ENST00000560927 RIMBP2O15034 1052 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 PDHBP11177 359 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
CRTC3-210ENST00000560927 HOXA10P31260 410 aaPredicted RBP16.41■□□□□ 0.22
CRTC3-210ENST00000560927 KRT9P35527 623 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 SOGA3Q5TF21 947 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 TTI2Q6NXR4 508 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 LRRC47Q8N1G4 583 aaKnown RBP16.41■□□□□ 0.22
CRTC3-210ENST00000560927 TBC1D22AQ8WUA7 517 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 TRIM47Q96LD4 638 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 AK8Q96MA6 479 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 MMTAG2Q9BU76 263 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms