RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 CCDC174Q6PII3 467 aa13.38□□□□□ -0.27
TM2D3-208ENST00000559891 BTNL9Q6UXG8 535 aa13.38□□□□□ -0.27
TM2D3-208ENST00000559891 COA7Q96BR5 231 aa13.38□□□□□ -0.27
TM2D3-208ENST00000559891 P2RX7Q99572 595 aaKnown RBP13.38□□□□□ -0.27
TM2D3-208ENST00000559891 LLPHQ9BRT6 129 aaKnown RBP13.38□□□□□ -0.27
TM2D3-208ENST00000559891 VPS54Q9P1Q0 977 aa13.38□□□□□ -0.27
TM2D3-208ENST00000559891 ZDHHC9Q9Y397 364 aa13.38□□□□□ -0.27
TM2D3-208ENST00000559891 IGF2BP3O00425 579 aaKnown RBP eCLIP13.37□□□□□ -0.27
TM2D3-208ENST00000559891 ZBTB48P10074 688 aaPredicted RBP13.37□□□□□ -0.27
TM2D3-208ENST00000559891 PPP2R5BQ15173 497 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 CDC37Q16543 378 aaPredicted RBP13.37□□□□□ -0.27
TM2D3-208ENST00000559891 WWC2Q6AWC2 1192 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 CHAMP1Q96JM3 812 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 SLF1Q9BQI6 1058 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 RNF26Q9BY78 433 aaPredicted RBP13.37□□□□□ -0.27
TM2D3-208ENST00000559891 KCNJ14Q9UNX9 436 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 SPDYE16A6NNV3 312 aaPredicted RBP13.37□□□□□ -0.27
TM2D3-208ENST00000559891 SYT1P21579 422 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 GNAQP50148 359 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 USH1GQ495M9 461 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 MTMR8Q96EF0 704 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 AGBL1Q96MI9 1066 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 ALG1Q9BT22 464 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 ASCC2Q9H1I8 757 aaPredicted RBP13.37□□□□□ -0.27
TM2D3-208ENST00000559891 CREBZFQ9NS37 354 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 FEM1BQ9UK73 627 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 PPP1R9AQ9ULJ8 1098 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 AGTPBP1Q9UPW5 1226 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 ZNF536O15090 1300 aa13.37□□□□□ -0.27
TM2D3-208ENST00000559891 COL11A1P12107 1806 aaPredicted RBP13.36□□□□□ -0.27
TM2D3-208ENST00000559891 RRP9O43818 475 aaKnown RBP13.36□□□□□ -0.27
TM2D3-208ENST00000559891 GTF2A2P52657 109 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 CPLX2Q6PUV4 134 aaKnown RBP13.36□□□□□ -0.27
TM2D3-208ENST00000559891 HEATR3Q7Z4Q2 680 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 FAM184AQ8NB25 1140 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 PROCA1Q8NCQ7 364 aaPredicted RBP13.36□□□□□ -0.27
TM2D3-208ENST00000559891 RAVER2Q9HCJ3 691 aaKnown RBP13.36□□□□□ -0.27
TM2D3-208ENST00000559891 USP17L15C9J2P7 530 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 USP17L13C9JLJ4 530 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 USP17L11C9JVI0 530 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 USP17L18D6R9N7 530 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 USP17L22D6RA61 530 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 USP17L17D6RBQ6 530 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 USP17L19D6RCP7 530 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 USP17L20D6RJB6 530 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 PDHXO00330 501 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 VWA5AO00534 786 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 CDKL5O76039 1030 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 TPM2P07951 284 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 CETPP11597 493 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 SCG2P13521 617 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 DSG3P32926 999 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 USP17L24Q0WX57 530 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 COG2Q14746 738 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 PFKFB3Q16875 520 aaPredicted RBP13.36□□□□□ -0.27
TM2D3-208ENST00000559891 DEFB115Q30KQ5 88 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 TRIM22Q8IYM9 498 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 PRPF38AQ8NAV1 312 aaKnown RBP13.36□□□□□ -0.27
TM2D3-208ENST00000559891 GPT2Q8TD30 523 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 RRP36Q96EU6 259 aaKnown RBP13.36□□□□□ -0.27
TM2D3-208ENST00000559891 PDLIM2Q96JY6 352 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 TXNRD2Q9NNW7 524 aa13.36□□□□□ -0.27
TM2D3-208ENST00000559891 ZBTB5O15062 677 aa13.35□□□□□ -0.27
TM2D3-208ENST00000559891 PRPF40AO75400 957 aaKnown RBP13.35□□□□□ -0.27
TM2D3-208ENST00000559891 DEXIO95424 95 aa13.35□□□□□ -0.27
TM2D3-208ENST00000559891 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
TM2D3-208ENST00000559891 HOXA7P31268 230 aaPredicted RBP13.35□□□□□ -0.27
TM2D3-208ENST00000559891 KIF23Q02241 960 aaPredicted RBP13.35□□□□□ -0.27
TM2D3-208ENST00000559891 NOM1Q5C9Z4 860 aaKnown RBP13.35□□□□□ -0.27
TM2D3-208ENST00000559891 LARP1BQ659C4 914 aaKnown RBP13.35□□□□□ -0.27
TM2D3-208ENST00000559891 CHURC1Q8WUH1 139 aa13.35□□□□□ -0.27
TM2D3-208ENST00000559891 LZTS2Q9BRK4 669 aa13.35□□□□□ -0.27
TM2D3-208ENST00000559891 BTBD7Q9P203 1132 aa13.35□□□□□ -0.27
TM2D3-208ENST00000559891 RIPK3Q9Y572 518 aa13.35□□□□□ -0.27
TM2D3-208ENST00000559891 STK36Q9NRP7 1315 aa13.35□□□□□ -0.27
TM2D3-208ENST00000559891 RASSF10A6NK89 507 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 ECM2O94769 699 aaPredicted RBP13.34□□□□□ -0.27
TM2D3-208ENST00000559891 TMEM132BQ14DG7 1078 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 FASTKD5Q7L8L6 764 aaKnown RBP13.34□□□□□ -0.27
TM2D3-208ENST00000559891 REPS2Q8NFH8 660 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 CAPNS2Q96L46 248 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 RBSNQ9H1K0 784 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 RANBP17Q9H2T7 1088 aaKnown RBP13.34□□□□□ -0.27
TM2D3-208ENST00000559891 PNMA6FA0A0J9YX94 578 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 STXBP3O00186 592 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 SMARCA1P28370 1054 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 HMGN5P82970 282 aaKnown RBP13.34□□□□□ -0.27
TM2D3-208ENST00000559891 AKAP17AQ02040 695 aaKnown RBP13.34□□□□□ -0.27
TM2D3-208ENST00000559891 NPY5RQ15761 445 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 Q3C1V9 767 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 KRT40Q6A162 431 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 FERMT3Q86UX7 667 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 FAM160B2Q86V87 743 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 TBC1D5Q92609 795 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 SLC38A10Q9HBR0 1119 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 ADAMTS5Q9UNA0 930 aa13.34□□□□□ -0.27
TM2D3-208ENST00000559891 VPS37CA5D8V6 355 aaPredicted RBP13.33□□□□□ -0.28
TM2D3-208ENST00000559891 PLA2G6O60733 806 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms