RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CPLX3Q8WVH0 158 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 SEC16BQ96JE7 1060 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 MCOLN1Q9GZU1 580 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 PHAXQ9H814 394 aaKnown RBP6.2□□□□□ -1.42
SPG11-218ENST00000559754 KCNK12Q9HB15 430 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 AP5S1Q9NUS5 200 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 KIAA1522Q9P206 1035 aaPredicted RBP6.2□□□□□ -1.42
SPG11-218ENST00000559754 GPR55Q9Y2T6 319 aaPredicted RBP6.2□□□□□ -1.42
SPG11-218ENST00000559754 ARID1BQ8NFD5 2236 aaPredicted RBP6.19□□□□□ -1.42
SPG11-218ENST00000559754 NPIPB6E9PJ23 425 aa6.19□□□□□ -1.42
SPG11-218ENST00000559754 ABLIM1O14639 778 aa6.19□□□□□ -1.42
SPG11-218ENST00000559754 GSTM1P09488 218 aa6.19□□□□□ -1.42
SPG11-218ENST00000559754 ZNF445P59923 1031 aa6.19□□□□□ -1.42
SPG11-218ENST00000559754 TMEM62Q0P6H9 643 aa6.19□□□□□ -1.42
SPG11-218ENST00000559754 HLA-DQA1Q5Y7H0 255 aa6.19□□□□□ -1.42
SPG11-218ENST00000559754 CYP2R1Q6VVX0 501 aa6.19□□□□□ -1.42
SPG11-218ENST00000559754 SIAH1Q8IUQ4 282 aa6.19□□□□□ -1.42
SPG11-218ENST00000559754 FIBCD1Q8N539 461 aa6.19□□□□□ -1.42
SPG11-218ENST00000559754 CCSER2Q9H7U1 834 aa6.19□□□□□ -1.42
SPG11-218ENST00000559754 STRIP2Q9ULQ0 834 aa6.19□□□□□ -1.42
SPG11-218ENST00000559754 SMG5Q9UPR3 1016 aaKnown RBP6.19□□□□□ -1.42
SPG11-218ENST00000559754 MYOCOSA0A1B0GUC4 107 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 H0Y8X5 98 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 NASPP49321 788 aaPredicted RBP6.18□□□□□ -1.42
SPG11-218ENST00000559754 GALK1P51570 392 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 ERVFRD-1P60508 538 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 DLG4P78352 724 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 POU4F1Q01851 419 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 GNPTABQ3T906 1256 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 RTP2Q5QGT7 225 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 C9orf131Q5VYM1 1079 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 CIAPIN1Q6FI81 312 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 SLCO6A1Q86UG4 719 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 BRF1Q92994 677 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 PLCD4Q9BRC7 762 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 SLC12A9Q9BXP2 914 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 GBP3Q9H0R5 595 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 WHRNQ9P202 907 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 INPP5FQ9Y2H2 1132 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 DIS3Q9Y2L1 958 aaKnown RBP6.18□□□□□ -1.42
SPG11-218ENST00000559754 CCDC9Q9Y3X0 531 aaKnown RBP6.18□□□□□ -1.42
SPG11-218ENST00000559754 ZNF451Q9Y4E5 1061 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 LTBP3Q9NS15 1303 aa6.18□□□□□ -1.42
SPG11-218ENST00000559754 A0A1W2PQ27 194 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 A0A1W2PQ64 194 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 A0A1W2PQC6 194 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 A0A1W2PQD8 194 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 A0A1W2PQH9 124 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 UNCXA6NJT0 531 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 MPOP05164 745 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 SLC7A5Q01650 507 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 FBLN7Q53RD9 439 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 JAMLQ86YT9 394 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 NUP43Q8NFH3 380 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 NOL6Q9H6R4 1146 aaKnown RBP6.17□□□□□ -1.42
SPG11-218ENST00000559754 FAM86C1Q9NVL1 165 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 SIRT5Q9NXA8 310 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 ACSL6Q9UKU0 697 aa6.17□□□□□ -1.42
SPG11-218ENST00000559754 CBFA2T2O43439 604 aa6.16□□□□□ -1.42
SPG11-218ENST00000559754 EFEMP2O95967 443 aa6.16□□□□□ -1.42
SPG11-218ENST00000559754 PRKCAP17252 672 aa6.16□□□□□ -1.42
SPG11-218ENST00000559754 CASP7P55210 303 aa6.16□□□□□ -1.42
SPG11-218ENST00000559754 LINC00310P59036 64 aa6.16□□□□□ -1.42
SPG11-218ENST00000559754 SRSF3P84103 164 aaKnown RBP6.16□□□□□ -1.42
SPG11-218ENST00000559754 CYP4F8P98187 520 aa6.16□□□□□ -1.42
SPG11-218ENST00000559754 PPP2R5EQ16537 467 aa6.16□□□□□ -1.42
SPG11-218ENST00000559754 HEATR6Q6AI08 1181 aaKnown RBP6.16□□□□□ -1.42
SPG11-218ENST00000559754 SPOCD1Q6ZMY3 1216 aa6.16□□□□□ -1.42
SPG11-218ENST00000559754 C1QL4Q86Z23 238 aa6.16□□□□□ -1.42
SPG11-218ENST00000559754 HAUS7Q99871 368 aa6.16□□□□□ -1.42
SPG11-218ENST00000559754 RFXAPO00287 272 aa6.15□□□□□ -1.42
SPG11-218ENST00000559754 FGF10O15520 208 aaPredicted RBP6.15□□□□□ -1.42
SPG11-218ENST00000559754 NUAK1O60285 661 aa6.15□□□□□ -1.42
SPG11-218ENST00000559754 PPM1BO75688 479 aa6.15□□□□□ -1.42
SPG11-218ENST00000559754 TBC1D8O95759 1140 aa6.15□□□□□ -1.42
SPG11-218ENST00000559754 ZSCAN22P10073 491 aaPredicted RBP6.15□□□□□ -1.42
SPG11-218ENST00000559754 YBX1P67809 324 aaKnown RBP6.15□□□□□ -1.42
SPG11-218ENST00000559754 RBM10P98175 930 aaKnown RBP6.15□□□□□ -1.42
SPG11-218ENST00000559754 ADAT2Q7Z6V5 191 aaKnown RBP6.15□□□□□ -1.42
SPG11-218ENST00000559754 TMEM52Q8NDY8 209 aa6.15□□□□□ -1.42
SPG11-218ENST00000559754 SHDQ96IW2 340 aa6.15□□□□□ -1.42
SPG11-218ENST00000559754 ACBD3Q9H3P7 528 aa6.15□□□□□ -1.42
SPG11-218ENST00000559754 CD3EP07766 207 aa6.14□□□□□ -1.43
SPG11-218ENST00000559754 ZNF385BQ569K4 471 aa6.14□□□□□ -1.43
SPG11-218ENST00000559754 AMIGO3Q86WK7 504 aa6.14□□□□□ -1.43
SPG11-218ENST00000559754 VPS37DQ86XT2 251 aa6.14□□□□□ -1.43
SPG11-218ENST00000559754 ZDHHC15Q96MV8 337 aa6.14□□□□□ -1.43
SPG11-218ENST00000559754 FCRL3Q96P31 734 aaPredicted RBP6.14□□□□□ -1.43
SPG11-218ENST00000559754 JMJD8Q96S16 334 aa6.14□□□□□ -1.43
SPG11-218ENST00000559754 KLHL25Q9H0H3 589 aa6.14□□□□□ -1.43
SPG11-218ENST00000559754 IMPACTQ9P2X3 320 aa6.14□□□□□ -1.43
SPG11-218ENST00000559754 CNOT6Q9ULM6 557 aaKnown RBP6.14□□□□□ -1.43
SPG11-218ENST00000559754 KRTAP4-8A0A0G2JLE6 195 aa6.13□□□□□ -1.43
SPG11-218ENST00000559754 A0A1W2PQJ5 194 aa6.13□□□□□ -1.43
SPG11-218ENST00000559754 NAT2P11245 290 aa6.13□□□□□ -1.43
SPG11-218ENST00000559754 VIPR1P32241 457 aa6.13□□□□□ -1.43
SPG11-218ENST00000559754 CORO7P57737 925 aa6.13□□□□□ -1.43
SPG11-218ENST00000559754 PPP2R5DQ14738 602 aa6.13□□□□□ -1.43
SPG11-218ENST00000559754 RAB3GAP1Q15042 981 aa6.13□□□□□ -1.43
SPG11-218ENST00000559754 EEF1DP3Q658K8 133 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms