RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 UTP14CQ5TAP6 766 aaKnown RBP8.6□□□□□ -1.03
ZEB1-216ENST00000559496 CENPQQ7L2Z9 268 aaPredicted RBP8.6□□□□□ -1.03
ZEB1-216ENST00000559496 COPS6Q7L5N1 327 aa8.6□□□□□ -1.03
ZEB1-216ENST00000559496 LRP10Q7Z4F1 713 aa8.6□□□□□ -1.03
ZEB1-216ENST00000559496 ZDHHC13Q8IUH4 622 aa8.6□□□□□ -1.03
ZEB1-216ENST00000559496 ZNF576Q9H609 170 aa8.6□□□□□ -1.03
ZEB1-216ENST00000559496 BIN2Q9UBW5 565 aaPredicted RBP8.6□□□□□ -1.03
ZEB1-216ENST00000559496 MAP3K2Q9Y2U5 619 aa8.6□□□□□ -1.03
ZEB1-216ENST00000559496 KDM2BQ8NHM5 1336 aa8.59□□□□□ -1.03
ZEB1-216ENST00000559496 TJP1Q07157 1748 aa8.59□□□□□ -1.03
ZEB1-216ENST00000559496 ATP10DQ9P241 1426 aa8.59□□□□□ -1.03
ZEB1-216ENST00000559496 GADD45BO75293 160 aaPredicted RBP8.59□□□□□ -1.03
ZEB1-216ENST00000559496 B3GALT4O96024 378 aa8.59□□□□□ -1.03
ZEB1-216ENST00000559496 MAP4P27816 1152 aaKnown RBP8.59□□□□□ -1.03
ZEB1-216ENST00000559496 HP1BP3Q5SSJ5 553 aaPredicted RBP8.59□□□□□ -1.03
ZEB1-216ENST00000559496 KRT27Q7Z3Y8 459 aa8.59□□□□□ -1.03
ZEB1-216ENST00000559496 MEIS3Q99687 375 aa8.59□□□□□ -1.03
ZEB1-216ENST00000559496 SRCIN1Q9C0H9 1055 aa8.59□□□□□ -1.03
ZEB1-216ENST00000559496 RWDD1Q9H446 243 aaPredicted RBP8.59□□□□□ -1.03
ZEB1-216ENST00000559496 DCTN4Q9UJW0 460 aa8.59□□□□□ -1.03
ZEB1-216ENST00000559496 BTAF1O14981 1849 aa8.58□□□□□ -1.04
ZEB1-216ENST00000559496 BRWD3Q6RI45 1802 aa8.58□□□□□ -1.04
ZEB1-216ENST00000559496 KIAA1324LA8MWY0 1029 aaPredicted RBP8.58□□□□□ -1.04
ZEB1-216ENST00000559496 TGFB1P01137 390 aa8.58□□□□□ -1.04
ZEB1-216ENST00000559496 IGHDP01880 384 aa8.58□□□□□ -1.04
ZEB1-216ENST00000559496 CYP19A1P11511 503 aaPredicted RBP8.58□□□□□ -1.04
ZEB1-216ENST00000559496 MAOBP27338 520 aa8.58□□□□□ -1.04
ZEB1-216ENST00000559496 RXRBP28702 533 aa8.58□□□□□ -1.04
ZEB1-216ENST00000559496 SSTR4P31391 388 aa8.58□□□□□ -1.04
ZEB1-216ENST00000559496 RGS3P49796 1198 aa8.58□□□□□ -1.04
ZEB1-216ENST00000559496 SOX4Q06945 474 aaPredicted RBP8.58□□□□□ -1.04
ZEB1-216ENST00000559496 POU4F3Q15319 338 aa8.58□□□□□ -1.04
ZEB1-216ENST00000559496 BEND3Q5T5X7 828 aa8.58□□□□□ -1.04
ZEB1-216ENST00000559496 PRPF40BQ6NWY9 871 aaKnown RBP8.58□□□□□ -1.04
ZEB1-216ENST00000559496 PTF1AQ7RTS3 328 aa8.58□□□□□ -1.04
ZEB1-216ENST00000559496 PCMTD2Q9NV79 361 aa8.58□□□□□ -1.04
ZEB1-216ENST00000559496 SBF2Q86WG5 1849 aa8.58□□□□□ -1.04
ZEB1-216ENST00000559496 CICQ96RK0 1608 aaPredicted RBP8.57□□□□□ -1.04
ZEB1-216ENST00000559496 COBLO75128 1261 aa8.57□□□□□ -1.04
ZEB1-216ENST00000559496 ALDH1L1O75891 902 aa8.57□□□□□ -1.04
ZEB1-216ENST00000559496 GNAI3P08754 354 aa8.57□□□□□ -1.04
ZEB1-216ENST00000559496 DRD2P14416 443 aa8.57□□□□□ -1.04
ZEB1-216ENST00000559496 NEXNQ0ZGT2 675 aa8.57□□□□□ -1.04
ZEB1-216ENST00000559496 HDAC1Q13547 482 aaPredicted RBP8.57□□□□□ -1.04
ZEB1-216ENST00000559496 SGO2Q562F6 1265 aa8.57□□□□□ -1.04
ZEB1-216ENST00000559496 FAM196AQ6ZSG2 479 aa8.57□□□□□ -1.04
ZEB1-216ENST00000559496 TMC7Q7Z402 723 aa8.57□□□□□ -1.04
ZEB1-216ENST00000559496 TEX2Q8IWB9 1127 aa8.57□□□□□ -1.04
ZEB1-216ENST00000559496 LINS1Q8NG48 757 aa8.57□□□□□ -1.04
ZEB1-216ENST00000559496 PLBD2Q8NHP8 589 aa8.57□□□□□ -1.04
ZEB1-216ENST00000559496 METTL22Q9BUU2 404 aaPredicted RBP8.57□□□□□ -1.04
ZEB1-216ENST00000559496 ARFGEF2Q9Y6D5 1785 aa8.56□□□□□ -1.04
ZEB1-216ENST00000559496 TMEM238LA0A1B0GVL6 79 aa8.56□□□□□ -1.04
ZEB1-216ENST00000559496 MED26O95402 600 aa8.56□□□□□ -1.04
ZEB1-216ENST00000559496 GNAI2P04899 355 aa8.56□□□□□ -1.04
ZEB1-216ENST00000559496 UBTFL1P0CB47 393 aaPredicted RBP8.56□□□□□ -1.04
ZEB1-216ENST00000559496 USP11P51784 963 aa8.56□□□□□ -1.04
ZEB1-216ENST00000559496 TERF1P54274 439 aa8.56□□□□□ -1.04
ZEB1-216ENST00000559496 ITPK1Q13572 414 aa8.56□□□□□ -1.04
ZEB1-216ENST00000559496 RPS26P11Q5JNZ5 115 aaPredicted RBP8.56□□□□□ -1.04
ZEB1-216ENST00000559496 KIF6Q6ZMV9 814 aa8.56□□□□□ -1.04
ZEB1-216ENST00000559496 TTLL7Q6ZT98 887 aa8.56□□□□□ -1.04
ZEB1-216ENST00000559496 MTERF4Q7Z6M4 381 aaKnown RBP8.56□□□□□ -1.04
ZEB1-216ENST00000559496 EPS8L3Q8TE67 593 aaKnown RBP8.56□□□□□ -1.04
ZEB1-216ENST00000559496 MYD88Q99836 296 aa8.56□□□□□ -1.04
ZEB1-216ENST00000559496 CORO1BQ9BR76 489 aa8.56□□□□□ -1.04
ZEB1-216ENST00000559496 ABCB6Q9NP58 842 aa8.56□□□□□ -1.04
ZEB1-216ENST00000559496 BCCIPQ9P287 314 aaKnown RBP eCLIP8.56□□□□□ -1.04
ZEB1-216ENST00000559496 ZBTB1Q9Y2K1 713 aa8.56□□□□□ -1.04
ZEB1-216ENST00000559496 ZNF831Q5JPB2 1677 aa8.55□□□□□ -1.04
ZEB1-216ENST00000559496 PRR19A6NJB7 356 aa8.55□□□□□ -1.04
ZEB1-216ENST00000559496 GRIK1P39086 918 aa8.55□□□□□ -1.04
ZEB1-216ENST00000559496 CRKLP46109 303 aaKnown RBP8.55□□□□□ -1.04
ZEB1-216ENST00000559496 CWF19L2Q2TBE0 894 aaKnown RBP8.55□□□□□ -1.04
ZEB1-216ENST00000559496 INTS5Q6P9B9 1019 aaKnown RBP8.55□□□□□ -1.04
ZEB1-216ENST00000559496 NPM2Q86SE8 214 aaKnown RBP8.55□□□□□ -1.04
ZEB1-216ENST00000559496 C2CD4AQ8NCU7 369 aaPredicted RBP8.55□□□□□ -1.04
ZEB1-216ENST00000559496 SHKBP1Q8TBC3 707 aa8.55□□□□□ -1.04
ZEB1-216ENST00000559496 TRIM56Q9BRZ2 755 aaKnown RBP8.55□□□□□ -1.04
ZEB1-216ENST00000559496 USP44Q9H0E7 712 aa8.55□□□□□ -1.04
ZEB1-216ENST00000559496 RGS17Q9UGC6 210 aaPredicted RBP8.55□□□□□ -1.04
ZEB1-216ENST00000559496 NUP188Q5SRE5 1749 aa8.55□□□□□ -1.04
ZEB1-216ENST00000559496 RREB1Q92766 1687 aa8.54□□□□□ -1.04
ZEB1-216ENST00000559496 IGKV5-2P06315 115 aa8.54□□□□□ -1.04
ZEB1-216ENST00000559496 CTSBP07858 339 aa8.54□□□□□ -1.04
ZEB1-216ENST00000559496 IL6STP40189 918 aaPredicted RBP8.54□□□□□ -1.04
ZEB1-216ENST00000559496 PLCB3Q01970 1234 aa8.54□□□□□ -1.04
ZEB1-216ENST00000559496 GRM2Q14416 872 aa8.54□□□□□ -1.04
ZEB1-216ENST00000559496 CEP85Q6P2H3 762 aa8.54□□□□□ -1.04
ZEB1-216ENST00000559496 RPAP2Q8IXW5 612 aaPredicted RBP8.54□□□□□ -1.04
ZEB1-216ENST00000559496 ANKRD44Q8N8A2 993 aa8.54□□□□□ -1.04
ZEB1-216ENST00000559496 RAD18Q9NS91 495 aa8.54□□□□□ -1.04
ZEB1-216ENST00000559496 C9orf78Q9NZ63 289 aaPredicted RBP8.54□□□□□ -1.04
ZEB1-216ENST00000559496 HDAC5Q9UQL6 1122 aa8.54□□□□□ -1.04
ZEB1-216ENST00000559496 LRRFIP2Q9Y608 721 aaKnown RBP8.54□□□□□ -1.04
ZEB1-216ENST00000559496 COL5A3P25940 1745 aaPredicted RBP8.54□□□□□ -1.04
ZEB1-216ENST00000559496 IBTKQ9P2D0 1353 aaPredicted RBP8.54□□□□□ -1.04
ZEB1-216ENST00000559496 AFDNP55196 1824 aaKnown RBP8.53□□□□□ -1.04
ZEB1-216ENST00000559496 FAM95CA0A1B0GW59 222 aa8.53□□□□□ -1.04
ZEB1-216ENST00000559496 GRM8O00222 908 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms