RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 AHDC1Q5TGY3 1603 aaPredicted RBP18.63■□□□□ 0.57
SPG11-215ENST00000559193 USP17L3A6NCW0 530 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 USP17L4A6NCW7 530 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 HNRNPH2P55795 449 aaKnown RBP18.63■□□□□ 0.57
SPG11-215ENST00000559193 NCAPH2Q6IBW4 605 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 WDR59Q6PJI9 974 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 USP17L1Q7RTZ2 530 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 GIMAP8Q8ND71 665 aaPredicted RBP18.63■□□□□ 0.57
SPG11-215ENST00000559193 TRIM47Q96LD4 638 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 CCSER1Q9C0I3 900 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 SUGCTQ9HAC7 445 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 GUCA1BQ9UMX6 200 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 L1RE1Q9UN81 338 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 IRS2Q9Y4H2 1338 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 CCDC88AQ3V6T2 1871 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 ROBO3Q96MS0 1386 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 STXBP3O00186 592 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 UBA7P41226 1012 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 TTI2Q6NXR4 508 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 HEATR3Q7Z4Q2 680 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 CAPN11Q9UMQ6 739 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 LUC7L2Q9Y383 392 aaKnown RBP18.62■□□□□ 0.57
SPG11-215ENST00000559193 ERLIN1O75477 346 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 MYL1P05976 194 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 HERVK_113P62684 666 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 MCM6Q14566 821 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 HDXQ7Z353 690 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 TXLNBQ8N3L3 684 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 CCDC148Q8NFR7 591 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 PDE11AQ9HCR9 933 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 FLT1P17948 1338 aa18.62■□□□□ 0.57
SPG11-215ENST00000559193 PES1O00541 588 aaKnown RBP18.61■□□□□ 0.57
SPG11-215ENST00000559193 PSMA7O14818 248 aa18.61■□□□□ 0.57
SPG11-215ENST00000559193 GNAQP50148 359 aa18.61■□□□□ 0.57
SPG11-215ENST00000559193 TMED8Q6PL24 325 aaPredicted RBP18.61■□□□□ 0.57
SPG11-215ENST00000559193 CCDC24Q8N4L8 307 aa18.61■□□□□ 0.57
SPG11-215ENST00000559193 NLRP3Q96P20 1036 aa18.61■□□□□ 0.57
SPG11-215ENST00000559193 BARHL2Q9NY43 387 aa18.61■□□□□ 0.57
SPG11-215ENST00000559193 STIM1Q13586 685 aa18.61■□□□□ 0.57
SPG11-215ENST00000559193 TRAPPC11Q7Z392 1133 aa18.61■□□□□ 0.57
SPG11-215ENST00000559193 SH3RF3Q8TEJ3 882 aaPredicted RBP18.61■□□□□ 0.57
SPG11-215ENST00000559193 DUSP9Q99956 384 aaKnown RBP18.61■□□□□ 0.57
SPG11-215ENST00000559193 TFR2Q9UP52 801 aa18.61■□□□□ 0.57
SPG11-215ENST00000559193 PSMD14O00487 310 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 TTYH3Q9C0H2 523 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 HAUS4Q9H6D7 363 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 MTMR7Q9Y216 660 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 SPATA31A5Q5VU36 1347 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 SPATA31A7Q8IWB4 1347 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 ZNF831Q5JPB2 1677 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 B4DLN1 442 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 SRGNP10124 158 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 PRPHP41219 470 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 GALNT17Q6IS24 598 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 MSL3Q8N5Y2 521 aaKnown RBP18.6■□□□□ 0.57
SPG11-215ENST00000559193 SLC44A5Q8NCS7 719 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 MKNK2Q9HBH9 465 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 SRP68Q9UHB9 627 aaKnown RBP18.6■□□□□ 0.57
SPG11-215ENST00000559193 ADAM21Q9UKJ8 722 aa18.6■□□□□ 0.57
SPG11-215ENST00000559193 LAD1O00515 517 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 MEA1Q16626 185 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 SPTY2D1Q68D10 685 aaPredicted RBP18.59■□□□□ 0.57
SPG11-215ENST00000559193 NYXQ9GZU5 481 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 MAGEC2Q9UBF1 373 aaPredicted RBP18.59■□□□□ 0.57
SPG11-215ENST00000559193 HDAC6Q9UBN7 1215 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 COL24A1Q17RW2 1714 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 PALM3A6NDB9 673 aaPredicted RBP18.59■□□□□ 0.57
SPG11-215ENST00000559193 RASSF10A6NK89 507 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 TSPY3P0CV98 308 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 TSPY8P0CW00 308 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 PLCG1P19174 1290 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 NT5C2P49902 561 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 DNM2P50570 870 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 GPS2Q13227 327 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 SLC51AQ86UW1 340 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 NBPF5PQ86XG9 351 aaPredicted RBP18.59■□□□□ 0.57
SPG11-215ENST00000559193 EXOC4Q96A65 974 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 CNTNAP4Q9C0A0 1308 aa18.59■□□□□ 0.57
SPG11-215ENST00000559193 ENC1O14682 589 aa18.58■□□□□ 0.57
SPG11-215ENST00000559193 RGL2O15211 777 aa18.58■□□□□ 0.57
SPG11-215ENST00000559193 SEMA3FQ13275 785 aa18.58■□□□□ 0.57
SPG11-215ENST00000559193 CSGALNACT2Q8N6G5 542 aa18.58■□□□□ 0.57
SPG11-215ENST00000559193 NOC3LQ8WTT2 800 aaKnown RBP18.58■□□□□ 0.57
SPG11-215ENST00000559193 DHTKD1Q96HY7 919 aaPredicted RBP18.58■□□□□ 0.57
SPG11-215ENST00000559193 TMEM47Q9BQJ4 181 aa18.58■□□□□ 0.57
SPG11-215ENST00000559193 TUBGCP2Q9BSJ2 902 aa18.58■□□□□ 0.57
SPG11-215ENST00000559193 TCP11L1Q9NUJ3 509 aa18.58■□□□□ 0.57
SPG11-215ENST00000559193 AGPAT5Q9NUQ2 364 aa18.58■□□□□ 0.57
SPG11-215ENST00000559193 EXOC1Q9NV70 894 aa18.58■□□□□ 0.57
SPG11-215ENST00000559193 ATP1A1P05023 1023 aaKnown RBP18.58■□□□□ 0.56
SPG11-215ENST00000559193 KLK7P49862 253 aa18.58■□□□□ 0.56
SPG11-215ENST00000559193 CABP7Q86V35 215 aa18.58■□□□□ 0.56
SPG11-215ENST00000559193 PSD3Q9NYI0 1048 aa18.58■□□□□ 0.56
SPG11-215ENST00000559193 N4BP1O75113 896 aaKnown RBP18.57■□□□□ 0.56
SPG11-215ENST00000559193 GOLGA8HP0CJ92 632 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 TM4SF1P30408 202 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 CASP8Q14790 479 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 DIXDC1Q155Q3 683 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 GRIK5Q16478 980 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 TXNRD1Q16881 649 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms