RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ACBD5Q5T8D3 534 aaPredicted RBP6.14□□□□□ -1.43
GABPB1-207ENST00000558335 RCSD1Q6JBY9 416 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 FBXO38Q6PIJ6 1188 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 CCDC80Q76M96 950 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 RASGRP2Q7LDG7 609 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 SRGAP1Q7Z6B7 1085 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 METTL16Q86W50 562 aaKnown RBP6.14□□□□□ -1.43
GABPB1-207ENST00000558335 TBC1D10CQ8IV04 446 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 AK8Q96MA6 479 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 ZSCAN10Q96SZ4 725 aaPredicted RBP6.14□□□□□ -1.43
GABPB1-207ENST00000558335 EIF3CQ99613 913 aaKnown RBP6.14□□□□□ -1.43
GABPB1-207ENST00000558335 CRNKL1Q9BZJ0 848 aaKnown RBP6.14□□□□□ -1.43
GABPB1-207ENST00000558335 TSGA10Q9BZW7 698 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 FTOQ9C0B1 505 aaKnown RBP eCLIP6.14□□□□□ -1.43
GABPB1-207ENST00000558335 NYXQ9GZU5 481 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 ANKRD2Q9GZV1 360 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 GREM2Q9H772 168 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 RMI1Q9H9A7 625 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 STRN4Q9NRL3 753 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 ARPP21Q9UBL0 812 aaPredicted RBP6.14□□□□□ -1.43
GABPB1-207ENST00000558335 LIMA1Q9UHB6 759 aaKnown RBP6.14□□□□□ -1.43
GABPB1-207ENST00000558335 CDC23Q9UJX2 597 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 BLOC1S6Q9UL45 172 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 CTDP1Q9Y5B0 961 aaPredicted RBP6.14□□□□□ -1.43
GABPB1-207ENST00000558335 MRFAP1Q9Y605 127 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 NEDD4P46934 1319 aa6.14□□□□□ -1.43
GABPB1-207ENST00000558335 PHLPP1O60346 1717 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 LAMB1P07942 1786 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 CTAGE15A4D2H0 777 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 USP27XA6NNY8 438 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 GSG1L2A8MUP6 293 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 hCG_1984214I3L0E3 225 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 PSMA7O14818 248 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 CHUKO15111 745 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 FOXP2O15409 715 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 SLC26A4O43511 780 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 E2F6O75461 281 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 FGRP09769 529 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 CTAGE8P0CG41 777 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 PNMA6AP0CW24 399 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 SMARCA1P28370 1054 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 CDC27P30260 824 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 ALDH1B1P30837 517 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 COPB2P35606 906 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 CYLC1P35663 651 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 USP5P45974 858 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 CHMP4BP1P59074 171 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 MCCD1P59942 119 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 GSTO1P78417 241 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 ATP2C1P98194 919 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 KCNB1Q14721 858 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 ERCC6LQ2NKX8 1250 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 CCDC38Q502W7 563 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 ZNF658Q5TYW1 1059 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 HHATQ5VTY9 493 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 CDKAL1Q5VV42 579 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 OTUD7BQ6GQQ9 843 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 TRIM65Q6PJ69 517 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 FOXR2Q6PJQ5 311 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 DNAJC14Q6Y2X3 702 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 MICALCLQ6ZW33 695 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 BRINP3Q76B58 766 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 CYB5R4Q7L1T6 521 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 TADA2BQ86TJ2 420 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 CTAGE6Q86UF2 777 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 SPATS2Q86XZ4 545 aaKnown RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 REXO1L1PQ8IX06 675 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 CTAGE4Q8IX94 777 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 DNAJC10Q8IXB1 793 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 CCDC170Q8IYT3 715 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 MYOCDQ8IZQ8 938 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 MICALL1Q8N3F8 863 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 CCDC155Q8N6L0 562 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 ZNF713Q8N859 430 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 IGSF22Q8N9C0 903 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 MAGEC3Q8TD91 643 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 ZNF483Q8TF39 744 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 PHKBQ93100 1093 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 FAM212AQ96EL1 285 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 RBM33Q96EV2 1170 aaKnown RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 DHTKD1Q96HY7 919 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 DCBLD2Q96PD2 775 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 NAP1L4Q99733 375 aaKnown RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 NAPGQ99747 312 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 ARPC5LQ9BPX5 153 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 PHF20Q9BVI0 1012 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 RAB34Q9BZG1 259 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 HAUS4Q9H6D7 363 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 VIPAS39Q9H9C1 493 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 PIH1D3Q9NQM4 214 aaKnown RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 SLAIN2Q9P270 581 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 ZNF330Q9Y3S2 320 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 PARP3Q9Y6F1 533 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 MROH7-TTC4A0A0A0MT08 1334 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 DISP2A7MBM2 1401 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 STRCP1A6NGW2 1772 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 MYO5AQ9Y4I1 1855 aaKnown RBP6.13□□□□□ -1.43
GABPB1-207ENST00000558335 MYH13Q9UKX3 1938 aa6.13□□□□□ -1.43
GABPB1-207ENST00000558335 TARSL2A2RTX5 802 aaKnown RBP6.12□□□□□ -1.43
GABPB1-207ENST00000558335 ZNF804BA4D1E1 1349 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms