RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 PRR23BQ6ZRT6 265 aa5.7□□□□□ -1.5
SUPT16H-206ENST00000556309 ADAT2Q7Z6V5 191 aaKnown RBP5.7□□□□□ -1.5
SUPT16H-206ENST00000556309 CELF2-AS1Q8N7Q2 184 aa5.7□□□□□ -1.5
SUPT16H-206ENST00000556309 SLC26A8Q96RN1 970 aa5.7□□□□□ -1.5
SUPT16H-206ENST00000556309 LGR4Q9BXB1 951 aa5.7□□□□□ -1.5
SUPT16H-206ENST00000556309 KLHL25Q9H0H3 589 aa5.7□□□□□ -1.5
SUPT16H-206ENST00000556309 NOL6Q9H6R4 1146 aaKnown RBP5.7□□□□□ -1.5
SUPT16H-206ENST00000556309 SUSD2Q9UGT4 822 aa5.7□□□□□ -1.5
SUPT16H-206ENST00000556309 R3HCC1Q9Y3T6 440 aaKnown RBP5.7□□□□□ -1.5
SUPT16H-206ENST00000556309 SSU72P8A0A1W2PR75 194 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 NPIPB6E9PJ23 425 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 H0Y8X5 98 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 ERVFC1P60507 584 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 TEKQ02763 1124 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 TCEAL1Q15170 157 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 FAM178BQ8IXR5 827 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 FIBCD1Q8N539 461 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 ZNF655Q8N720 491 aaPredicted RBP5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 RELTQ969Z4 430 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 ZDHHC15Q96MV8 337 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 ALPK1Q96QP1 1244 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 EPB41L4BQ9H329 900 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 C19orf73Q9NVV2 129 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 APEX2Q9UBZ4 518 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 TCFL5Q9UL49 500 aa5.69□□□□□ -1.5
SUPT16H-206ENST00000556309 KLF4O43474 513 aa5.68□□□□□ -1.5
SUPT16H-206ENST00000556309 GJB6O95452 261 aa5.68□□□□□ -1.5
SUPT16H-206ENST00000556309 KRT1P04264 644 aa5.68□□□□□ -1.5
SUPT16H-206ENST00000556309 ITGA4P13612 1032 aa5.68□□□□□ -1.5
SUPT16H-206ENST00000556309 PCBP3P57721 371 aaKnown RBP5.68□□□□□ -1.5
SUPT16H-206ENST00000556309 MRM1Q6IN84 353 aaKnown RBP5.68□□□□□ -1.5
SUPT16H-206ENST00000556309 WAPLQ7Z5K2 1190 aa5.68□□□□□ -1.5
SUPT16H-206ENST00000556309 PPP1R14AQ96A00 147 aa5.68□□□□□ -1.5
SUPT16H-206ENST00000556309 EBF1Q9UH73 591 aa5.68□□□□□ -1.5
SUPT16H-206ENST00000556309 JAG2Q9Y219 1238 aa5.68□□□□□ -1.5
SUPT16H-206ENST00000556309 SUGT1Q9Y2Z0 365 aa5.68□□□□□ -1.5
SUPT16H-206ENST00000556309 VAMP4O75379 141 aa5.67□□□□□ -1.5
SUPT16H-206ENST00000556309 RAC2P15153 192 aa5.67□□□□□ -1.5
SUPT16H-206ENST00000556309 FXNQ16595 210 aa5.67□□□□□ -1.5
SUPT16H-206ENST00000556309 FYB2Q5VWT5 728 aa5.67□□□□□ -1.5
SUPT16H-206ENST00000556309 GBP3Q9H0R5 595 aa5.67□□□□□ -1.5
SUPT16H-206ENST00000556309 NSUN3Q9H649 340 aaKnown RBP5.67□□□□□ -1.5
SUPT16H-206ENST00000556309 DCP1AQ9NPI6 582 aaPredicted RBP5.67□□□□□ -1.5
SUPT16H-206ENST00000556309 ZMYM5Q9UJ78 669 aa5.67□□□□□ -1.5
SUPT16H-206ENST00000556309 TMEM59LQ9UK28 342 aa5.67□□□□□ -1.5
SUPT16H-206ENST00000556309 FHOD1Q9Y613 1164 aa5.67□□□□□ -1.5
SUPT16H-206ENST00000556309 TMEM82A0PJX8 343 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 PPM1BO75688 479 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 ZGLP1P0C6A0 271 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 VAV1P15498 845 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 TRHRP34981 398 aaPredicted RBP5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 NCAPHQ15003 741 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 DPY19L1Q2PZI1 675 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 ERICH6BQ5W0A0 696 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 CWF19L1Q69YN2 538 aaKnown RBP5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 RNF111Q6ZNA4 994 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 CKAP2LQ8IYA6 745 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 ZNF513Q8N8E2 541 aaPredicted RBP5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 LINC00116Q8NCU8 138 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 CDADC1Q9BWV3 514 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 AP5S1Q9NUS5 200 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 PRR13Q9NZ81 148 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 WHRNQ9P202 907 aa5.66□□□□□ -1.5
SUPT16H-206ENST00000556309 ANKRD34BA5PLL1 514 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 SUSD5O60279 629 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 NUAK1O60285 661 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 GSNP06396 782 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 CD3EP07766 207 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 GSTM1P09488 218 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 IFNGR1P15260 489 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 BMP8BP34820 402 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 DDR2Q16832 855 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 ATG14Q6ZNE5 492 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 PMFBP1Q8TBY8 1022 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 SYTL4Q96C24 671 aaPredicted RBP5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 APBA2Q99767 749 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 MCMBPQ9BTE3 642 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 TRIM55Q9BYV6 548 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 C19orf44Q9H6X5 657 aa5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 CGGBP1Q9UFW8 167 aaPredicted RBP5.65□□□□□ -1.5
SUPT16H-206ENST00000556309 CCDC85CA6NKD9 419 aa5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 ZNF205O95201 554 aa5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 HOXA5P20719 270 aa5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 GALK1P51570 392 aa5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 RAB33AQ14088 237 aa5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 SV2CQ496J9 727 aa5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 RTP2Q5QGT7 225 aa5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 SREK1Q8WXA9 508 aaKnown RBP5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 G6PC3Q9BUM1 346 aa5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 SLC12A9Q9BXP2 914 aa5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 PARD6AQ9NPB6 346 aa5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 AKT3Q9Y243 479 aa5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 DIS3Q9Y2L1 958 aaKnown RBP5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 GPR55Q9Y2T6 319 aaPredicted RBP5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 ZNF281Q9Y2X9 895 aa5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 SF3B6Q9Y3B4 125 aaKnown RBP5.64□□□□□ -1.51
SUPT16H-206ENST00000556309 A0A087WZG4 1122 aa5.63□□□□□ -1.51
SUPT16H-206ENST00000556309 STXBP3O00186 592 aa5.63□□□□□ -1.51
SUPT16H-206ENST00000556309 TBX1O43435 398 aa5.63□□□□□ -1.51
SUPT16H-206ENST00000556309 USP2O75604 605 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms