RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 RIOX1Q9H6W3 641 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 SLC38A10Q9HBR0 1119 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 RBPJLQ9UBG7 517 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 TPCN1Q9ULQ1 816 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 HPS5Q9UPZ3 1129 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 RLFQ13129 1914 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 NID2Q14112 1375 aa8.85□□□□□ -0.99
TDP1-214ENST00000556063 PARP14Q460N5 1801 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 ADGRA2Q96PE1 1338 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 PNMA6FA0A0J9YX94 578 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 ZBTB5O15062 677 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 FKTNO75072 461 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 PLEKHA8P1O95397 391 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 ICAM1P05362 532 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 IFNAR1P17181 557 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 HOXD10P28358 340 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 MAPK4P31152 587 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 ADD1P35611 737 aaKnown RBP8.84□□□□□ -0.99
TDP1-214ENST00000556063 SLC4A3P48751 1232 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 CTCFP49711 727 aaPredicted RBP8.84□□□□□ -0.99
TDP1-214ENST00000556063 ME3Q16798 604 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 WDR78Q5VTH9 848 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 SNRNP48Q6IEG0 339 aaKnown RBP8.84□□□□□ -0.99
TDP1-214ENST00000556063 CCDC174Q6PII3 467 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 RASGRP2Q7LDG7 609 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 FBXO11Q86XK2 927 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 HOMER1Q86YM7 354 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 RIOX2Q8IUF8 465 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 CCDC82Q8N4S0 544 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 SRBD1Q8N5C6 995 aaKnown RBP8.84□□□□□ -0.99
TDP1-214ENST00000556063 SHCBP1Q8NEM2 672 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 ERO1AQ96HE7 468 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 AMNQ9BXJ7 453 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 RNF26Q9BY78 433 aaPredicted RBP8.84□□□□□ -0.99
TDP1-214ENST00000556063 MROH8Q9H579 483 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 JMJD4Q9H9V9 463 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 RAVER2Q9HCJ3 691 aaKnown RBP8.84□□□□□ -0.99
TDP1-214ENST00000556063 FBXO40Q9UH90 709 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 CCPG1Q9ULG6 757 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 IVNS1ABPQ9Y6Y0 642 aa8.84□□□□□ -0.99
TDP1-214ENST00000556063 hCG_1984214I3L0E3 225 aa8.83□□□□□ -1
TDP1-214ENST00000556063 GNRH1P01148 92 aa8.83□□□□□ -1
TDP1-214ENST00000556063 HSPA1AP0DMV8 641 aaKnown RBP8.83□□□□□ -1
TDP1-214ENST00000556063 HSPA1BP0DMV9 641 aaKnown RBP8.83□□□□□ -1
TDP1-214ENST00000556063 CDC27P30260 824 aa8.83□□□□□ -1
TDP1-214ENST00000556063 FCGRTP55899 365 aa8.83□□□□□ -1
TDP1-214ENST00000556063 SSRP1Q08945 709 aaKnown RBP8.83□□□□□ -1
TDP1-214ENST00000556063 SCRN1Q12765 414 aa8.83□□□□□ -1
TDP1-214ENST00000556063 TMEM132BQ14DG7 1078 aa8.83□□□□□ -1
TDP1-214ENST00000556063 QRICH1Q2TAL8 776 aa8.83□□□□□ -1
TDP1-214ENST00000556063 NCAPG2Q86XI2 1143 aa8.83□□□□□ -1
TDP1-214ENST00000556063 HSCBQ8IWL3 235 aa8.83□□□□□ -1
TDP1-214ENST00000556063 ZNF713Q8N859 430 aaPredicted RBP8.83□□□□□ -1
TDP1-214ENST00000556063 CHST13Q8NET6 341 aa8.83□□□□□ -1
TDP1-214ENST00000556063 REPS2Q8NFH8 660 aa8.83□□□□□ -1
TDP1-214ENST00000556063 WASF1Q92558 559 aa8.83□□□□□ -1
TDP1-214ENST00000556063 GTF3C6Q969F1 213 aa8.83□□□□□ -1
TDP1-214ENST00000556063 COA7Q96BR5 231 aa8.83□□□□□ -1
TDP1-214ENST00000556063 MTMR8Q96EF0 704 aa8.83□□□□□ -1
TDP1-214ENST00000556063 PIGSQ96S52 555 aa8.83□□□□□ -1
TDP1-214ENST00000556063 LLPHQ9BRT6 129 aaKnown RBP8.83□□□□□ -1
TDP1-214ENST00000556063 MOV10L1Q9BXT6 1211 aaKnown RBP8.83□□□□□ -1
TDP1-214ENST00000556063 MAF1Q9H063 256 aa8.83□□□□□ -1
TDP1-214ENST00000556063 CPVLQ9H3G5 476 aa8.83□□□□□ -1
TDP1-214ENST00000556063 NCOA5Q9HCD5 579 aaKnown RBP8.83□□□□□ -1
TDP1-214ENST00000556063 TXNRD2Q9NNW7 524 aa8.83□□□□□ -1
TDP1-214ENST00000556063 FAM217BQ9NTX9 383 aaPredicted RBP8.83□□□□□ -1
TDP1-214ENST00000556063 BTBD7Q9P203 1132 aa8.83□□□□□ -1
TDP1-214ENST00000556063 ZNF214Q9UL59 606 aaPredicted RBP8.83□□□□□ -1
TDP1-214ENST00000556063 MRPL11Q9Y3B7 192 aaKnown RBP8.83□□□□□ -1
TDP1-214ENST00000556063 KIF3AQ9Y496 699 aa8.83□□□□□ -1
TDP1-214ENST00000556063 V9GY48 417 aaPredicted RBP8.83□□□□□ -1
TDP1-214ENST00000556063 ABCB11O95342 1321 aa8.82□□□□□ -1
TDP1-214ENST00000556063 COL11A1P12107 1806 aaPredicted RBP8.82□□□□□ -1
TDP1-214ENST00000556063 TNPO2O14787 897 aaKnown RBP8.82□□□□□ -1
TDP1-214ENST00000556063 PRPF3O43395 683 aaKnown RBP8.82□□□□□ -1
TDP1-214ENST00000556063 CYTH3O43739 400 aa8.82□□□□□ -1
TDP1-214ENST00000556063 STRNO43815 780 aa8.82□□□□□ -1
TDP1-214ENST00000556063 CNMDO75829 334 aa8.82□□□□□ -1
TDP1-214ENST00000556063 FMNL1O95466 1100 aaPredicted RBP8.82□□□□□ -1
TDP1-214ENST00000556063 ALAS1P13196 640 aa8.82□□□□□ -1
TDP1-214ENST00000556063 XBP1P17861 261 aa8.82□□□□□ -1
TDP1-214ENST00000556063 ERCC3P19447 782 aa8.82□□□□□ -1
TDP1-214ENST00000556063 SNAP25P60880 206 aa8.82□□□□□ -1
TDP1-214ENST00000556063 HMGN5P82970 282 aaKnown RBP8.82□□□□□ -1
TDP1-214ENST00000556063 LACTBP83111 547 aaPredicted RBP8.82□□□□□ -1
TDP1-214ENST00000556063 KCTD2Q14681 263 aa8.82□□□□□ -1
TDP1-214ENST00000556063 Q3C1V9 767 aa8.82□□□□□ -1
TDP1-214ENST00000556063 NBPF11Q86T75 865 aa8.82□□□□□ -1
TDP1-214ENST00000556063 MCF2L2Q86YR7 1114 aa8.82□□□□□ -1
TDP1-214ENST00000556063 CMTR1Q8N1G2 835 aaKnown RBP8.82□□□□□ -1
TDP1-214ENST00000556063 SAMD3Q8N6K7 520 aa8.82□□□□□ -1
TDP1-214ENST00000556063 NECAB1Q8N987 351 aa8.82□□□□□ -1
TDP1-214ENST00000556063 CCDC12Q8WUD4 166 aaPredicted RBP8.82□□□□□ -1
TDP1-214ENST00000556063 PIBF1Q8WXW3 757 aa8.82□□□□□ -1
TDP1-214ENST00000556063 SNX21Q969T3 373 aa8.82□□□□□ -1
TDP1-214ENST00000556063 TMX3Q96JJ7 454 aa8.82□□□□□ -1
TDP1-214ENST00000556063 SLC26A6Q9BXS9 759 aa8.82□□□□□ -1
TDP1-214ENST00000556063 R3HDMLQ9H3Y0 253 aa8.82□□□□□ -1
TDP1-214ENST00000556063 ACAD9Q9H845 621 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms