RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 USP17L12C9JPN9 530 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 USP17L21D6R901 530 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 GOLGA8KD6RF30 607 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 KCNQ2O43526 872 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 MMP14P50281 582 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 MECOMQ03112 1051 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 DPYDQ12882 1025 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 SEMA3FQ13275 785 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 ZNF827Q17R98 1081 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 SPECC1Q5M775 1068 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 TBC1D9BQ66K14 1250 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 TPTE2Q6XPS3 522 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 AMOTL1Q8IY63 956 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 RWDD2AQ9UIY3 292 aa11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 EPN1Q9Y6I3 576 aaPredicted RBP11.98□□□□□ -0.49
MTHFD1-210ENST00000555252 SHTN1A0MZ66 631 aa11.97□□□□□ -0.49
MTHFD1-210ENST00000555252 PPP1R3GB7ZBB8 358 aa11.97□□□□□ -0.49
MTHFD1-210ENST00000555252 PHACTR2O75167 634 aa11.97□□□□□ -0.49
MTHFD1-210ENST00000555252 NDUFA10O95299 355 aa11.97□□□□□ -0.49
MTHFD1-210ENST00000555252 KRT83P78385 493 aa11.97□□□□□ -0.49
MTHFD1-210ENST00000555252 GRIN1Q05586 938 aa11.97□□□□□ -0.49
MTHFD1-210ENST00000555252 NBPF5PQ86XG9 351 aaPredicted RBP11.97□□□□□ -0.49
MTHFD1-210ENST00000555252 ZNF384Q8TF68 577 aa11.97□□□□□ -0.49
MTHFD1-210ENST00000555252 CPLX3Q8WVH0 158 aa11.97□□□□□ -0.49
MTHFD1-210ENST00000555252 DCP1AQ9NPI6 582 aaPredicted RBP11.97□□□□□ -0.49
MTHFD1-210ENST00000555252 COL24A1Q17RW2 1714 aa11.97□□□□□ -0.49
MTHFD1-210ENST00000555252 A0A1W2PQC6 194 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 GOLGA6CA6NDK9 693 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 N4BP3O15049 544 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 OPA1O60313 960 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 ZPR1O75312 459 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 PLEKHA8P1O95397 391 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 GOLGA6DP0CG33 693 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 EPB41P11171 864 aaKnown RBP11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 KIF5BP33176 963 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 MICALL1Q8N3F8 863 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 TNFRSF25Q93038 417 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 PAGE5Q96GU1 130 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 NUP88Q99567 741 aaPredicted RBP11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 A1CFQ9NQ94 594 aaKnown RBP11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 GOLGA6AQ9NYA3 693 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 FAM184BQ9ULE4 1060 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 CNTNAP5Q8WYK1 1306 aa11.96□□□□□ -0.49
MTHFD1-210ENST00000555252 A0A0U1RQJ8 604 aa11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 KRT86O43790 486 aa11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 CALML3P27482 149 aa11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 COPB1P53618 953 aaKnown RBP11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 KRT31Q15323 416 aa11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 TTC38Q5R3I4 469 aa11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 NCAPH2Q6IBW4 605 aa11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 CCNI2Q6ZMN8 369 aaPredicted RBP11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 BICDL1Q6ZP65 573 aa11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 ZNF572Q7Z3I7 529 aaPredicted RBP11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 FNBP4Q8N3X1 1017 aaPredicted RBP11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 ATRIPQ8WXE1 791 aa11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 DRC1Q96MC2 740 aa11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 DNAJC7Q99615 494 aa11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 LAMB1P07942 1786 aa11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 CASZ1Q86V15 1759 aa11.96□□□□□ -0.5
MTHFD1-210ENST00000555252 CYP2D7A0A087X1C5 515 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 EIF3HO15372 352 aaKnown RBP eCLIP11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 ZEB2O60315 1214 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 SCG2P13521 617 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 CD44P16070 742 aaKnown RBP11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 KRT9P35527 623 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 IRAK1P51617 712 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 SKOR1P84550 965 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 ATP2C1P98194 919 aaPredicted RBP11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 VPS72Q15906 364 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 PFKFB3Q16875 520 aaPredicted RBP11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 B4GALNT4Q76KP1 1039 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 CNPY4Q8N129 248 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 OR8K1Q8NGG5 319 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 ANKS1AQ92625 1134 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 SH3GL2Q99962 352 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 PAGR1Q9BTK6 254 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 SELENOOQ9BVL4 669 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 CAPS2Q9BXY5 557 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 SH3GLB2Q9NR46 395 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 RMND1Q9NWS8 449 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 FAM169AQ9Y6X4 670 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 GOLGA6BA6NDN3 693 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 PRDM1O75626 825 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 GGCXP38435 758 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 GNAQP50148 359 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 GSTO1P78417 241 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 TSR1Q2NL82 804 aaKnown RBP11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 DGKHQ86XP1 1220 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 CERS3Q8IU89 383 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 MMGT1Q8N4V1 131 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 WDR66Q8TBY9 1149 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 AENQ8WTP8 325 aaKnown RBP11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 SHISA4Q96DD7 197 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 SLF1Q9BQI6 1058 aa11.95□□□□□ -0.5
MTHFD1-210ENST00000555252 MYH1P12882 1939 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 KIAA1551Q9HCM1 1747 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 WTIPA6NIX2 430 aaPredicted RBP11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 TSPY2A6NKD2 308 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 AGPSO00116 658 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 PRLRP16471 622 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms