RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 PTPRN2Q92932 1015 aa7.44□□□□□ -1.22
PSEN1-211ENST00000554995 C1orf159Q96HA4 380 aa7.44□□□□□ -1.22
PSEN1-211ENST00000554995 SCLYQ96I15 445 aa7.44□□□□□ -1.22
PSEN1-211ENST00000554995 ZDHHC15Q96MV8 337 aa7.44□□□□□ -1.22
PSEN1-211ENST00000554995 DSCC1Q9BVC3 393 aa7.44□□□□□ -1.22
PSEN1-211ENST00000554995 CHMP4AQ9BY43 222 aa7.44□□□□□ -1.22
PSEN1-211ENST00000554995 TPX2Q9ULW0 747 aaKnown RBP7.44□□□□□ -1.22
PSEN1-211ENST00000554995 GPR55Q9Y2T6 319 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-211ENST00000554995 THRAP3Q9Y2W1 955 aaKnown RBP7.44□□□□□ -1.22
PSEN1-211ENST00000554995 CNTNAP4Q9C0A0 1308 aa7.44□□□□□ -1.22
PSEN1-211ENST00000554995 EYA4O95677 639 aa7.43□□□□□ -1.22
PSEN1-211ENST00000554995 ASLP04424 464 aa7.43□□□□□ -1.22
PSEN1-211ENST00000554995 SCG5P05408 212 aa7.43□□□□□ -1.22
PSEN1-211ENST00000554995 POU3F2P20265 443 aaPredicted RBP7.43□□□□□ -1.22
PSEN1-211ENST00000554995 CYP7A1P22680 504 aa7.43□□□□□ -1.22
PSEN1-211ENST00000554995 NOS3P29474 1203 aa7.43□□□□□ -1.22
PSEN1-211ENST00000554995 AMPD2Q01433 879 aa7.43□□□□□ -1.22
PSEN1-211ENST00000554995 CYP4F3Q08477 520 aa7.43□□□□□ -1.22
PSEN1-211ENST00000554995 PCBP1Q15365 356 aaKnown RBP eCLIP7.43□□□□□ -1.22
PSEN1-211ENST00000554995 PRSS53Q2L4Q9 553 aa7.43□□□□□ -1.22
PSEN1-211ENST00000554995 HSP90AB2PQ58FF8 381 aa7.43□□□□□ -1.22
PSEN1-211ENST00000554995 WFDC12Q8WWY7 111 aa7.43□□□□□ -1.22
PSEN1-211ENST00000554995 CYP26B1Q9NR63 512 aa7.43□□□□□ -1.22
PSEN1-211ENST00000554995 SF3B6Q9Y3B4 125 aaKnown RBP7.43□□□□□ -1.22
PSEN1-211ENST00000554995 H0Y8X5 98 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 SIGLEC6O43699 453 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 SPATA31C1P0DKV0 1188 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 CPEP16870 476 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 MAP4P27816 1152 aaKnown RBP7.42□□□□□ -1.22
PSEN1-211ENST00000554995 RXRBP28702 533 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 ECI1P42126 302 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 IREB2P48200 963 aaKnown RBP7.42□□□□□ -1.22
PSEN1-211ENST00000554995 NEK4P51957 841 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 SLC35F1Q5T1Q4 408 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 PKN3Q6P5Z2 889 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 USP53Q70EK8 1073 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 MAMDC2Q7Z304 686 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-211ENST00000554995 DUSP23Q9BVJ7 150 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 C1GALT1Q9NS00 363 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 CHST7Q9NS84 486 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 MINPP1Q9UNW1 487 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 WASHC2CQ9Y4E1 1318 aa7.42□□□□□ -1.22
PSEN1-211ENST00000554995 FAM95CA0A1B0GW59 222 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 KPNA6O60684 536 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 LEFTY1O75610 366 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 RASGRP1O95267 797 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 PRAMEF1O95521 474 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 CPP00450 1065 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 BMP3P12645 472 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 ITIH2P19823 946 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 IGFALSP35858 605 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 GUCY2FP51841 1108 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 NRG1Q02297 640 aaPredicted RBP7.41□□□□□ -1.22
PSEN1-211ENST00000554995 STRN3Q13033 797 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 DPY19L1Q2PZI1 675 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 UVSSAQ2YD98 709 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 FMNL3Q8IVF7 1028 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 DTWD2Q8NBA8 298 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 UTP4Q969X6 686 aaKnown RBP7.41□□□□□ -1.22
PSEN1-211ENST00000554995 MYRFLQ96LU7 910 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 Q96M66 194 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 MTFR1LQ9H019 292 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 TRAF6Q9Y4K3 522 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 ASXL2Q76L83 1435 aa7.41□□□□□ -1.22
PSEN1-211ENST00000554995 TCRBV16S1A1N1A0A5B0 115 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 C9orf172C9J069 976 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 MEIS1O00470 390 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 NPTXRO95502 500 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 JMJD7P0C870 316 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 SCRN1Q12765 414 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 SEPT7Q16181 437 aaKnown RBP7.4□□□□□ -1.22
PSEN1-211ENST00000554995 SFRP5Q5T4F7 317 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 DENND5AQ6IQ26 1287 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 RAVER1Q8IY67 606 aaKnown RBP7.4□□□□□ -1.22
PSEN1-211ENST00000554995 ARMC10Q8N2F6 343 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 KREMEN2Q8NCW0 462 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 COX4I2Q96KJ9 171 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 MAGEB10Q96LZ2 347 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-211ENST00000554995 KCNH3Q9ULD8 1083 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 FAN1Q9Y2M0 1017 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 EID1Q9Y6B2 187 aa7.4□□□□□ -1.22
PSEN1-211ENST00000554995 CRTAMO95727 393 aa7.39□□□□□ -1.23
PSEN1-211ENST00000554995 CBX7O95931 251 aa7.39□□□□□ -1.23
PSEN1-211ENST00000554995 FLT3P36888 993 aa7.39□□□□□ -1.23
PSEN1-211ENST00000554995 POU4F1Q01851 419 aa7.39□□□□□ -1.23
PSEN1-211ENST00000554995 NMIQ13287 307 aaPredicted RBP7.39□□□□□ -1.23
PSEN1-211ENST00000554995 DHCR24Q15392 516 aa7.39□□□□□ -1.23
PSEN1-211ENST00000554995 NFKBIBQ15653 356 aa7.39□□□□□ -1.23
PSEN1-211ENST00000554995 STYK1Q6J9G0 422 aa7.39□□□□□ -1.23
PSEN1-211ENST00000554995 KCNT2Q6UVM3 1135 aa7.39□□□□□ -1.23
PSEN1-211ENST00000554995 LHFPL2Q6ZUX7 228 aa7.39□□□□□ -1.23
PSEN1-211ENST00000554995 FAM20CQ8IXL6 584 aa7.39□□□□□ -1.23
PSEN1-211ENST00000554995 DCAF4Q8WV16 495 aa7.39□□□□□ -1.23
PSEN1-211ENST00000554995 NACC1Q96RE7 527 aa7.39□□□□□ -1.23
PSEN1-211ENST00000554995 MCMBPQ9BTE3 642 aa7.39□□□□□ -1.23
PSEN1-211ENST00000554995 PRDM5Q9NQX1 630 aaPredicted RBP7.39□□□□□ -1.23
PSEN1-211ENST00000554995 SHISA3A0PJX4 238 aa7.38□□□□□ -1.23
PSEN1-211ENST00000554995 STXBP3O00186 592 aa7.38□□□□□ -1.23
PSEN1-211ENST00000554995 AQP7O14520 342 aa7.38□□□□□ -1.23
PSEN1-211ENST00000554995 KATNA1O75449 491 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms