RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CHMP4BP1P59074 171 aa17.64■□□□□ 0.41
ARHGEF40-203ENST00000554514 GSTO1P78417 241 aa17.64■□□□□ 0.41
ARHGEF40-203ENST00000554514 TRIM10Q9UDY6 481 aa17.64■□□□□ 0.41
ARHGEF40-203ENST00000554514 IRS2Q9Y4H2 1338 aa17.64■□□□□ 0.41
ARHGEF40-203ENST00000554514 ZRANB2O95218 330 aaKnown RBP eCLIP17.64■□□□□ 0.41
ARHGEF40-203ENST00000554514 PLCG1P19174 1290 aa17.64■□□□□ 0.41
ARHGEF40-203ENST00000554514 EIF6P56537 245 aaKnown RBP17.64■□□□□ 0.41
ARHGEF40-203ENST00000554514 GPSM2P81274 684 aa17.64■□□□□ 0.41
ARHGEF40-203ENST00000554514 JAKMIP3Q5VZ66 844 aa17.64■□□□□ 0.41
ARHGEF40-203ENST00000554514 IRF2BP1Q8IU81 584 aa17.64■□□□□ 0.41
ARHGEF40-203ENST00000554514 ADSSL1Q8N142 457 aa17.64■□□□□ 0.41
ARHGEF40-203ENST00000554514 GPR161Q8N6U8 529 aaKnown RBP17.64■□□□□ 0.41
ARHGEF40-203ENST00000554514 SMCO2A6NFE2 343 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 M0R2N6 131 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 SASH3O75995 380 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 TECP42680 631 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 CDK8P49336 464 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 TRAPPC3LQ5T215 181 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 RC3H1Q5TC82 1133 aaKnown RBP17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 CC2D1AQ6P1N0 951 aaPredicted RBP17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 RSRC2Q7L4I2 434 aaKnown RBP17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 TMTC1Q8IUR5 882 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 RPGRQ92834 1020 aaKnown RBP17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 HPS3Q969F9 1004 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 BIN2Q9UBW5 565 aaPredicted RBP17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 GUCA1BQ9UMX6 200 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 FRMPD2Q68DX3 1309 aaPredicted RBP17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 ITIH6Q6UXX5 1313 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 TXNRD1Q16881 649 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 CYP26C1Q6V0L0 522 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 FAM196AQ6ZSG2 479 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 CABP7Q86V35 215 aa17.63■□□□□ 0.41
ARHGEF40-203ENST00000554514 TTC26A0AVF1 554 aa17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 CTAGE9A4FU28 777 aa17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 B4DLN1 442 aa17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 PCMTD1Q96MG8 357 aaPredicted RBP17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 RTFDC1Q9BY42 306 aaPredicted RBP17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 MAGEC2Q9UBF1 373 aaPredicted RBP17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 PALM3A6NDB9 673 aaPredicted RBP17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 H7C1D1 291 aa17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 ASIC1P78348 528 aa17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 PICALMQ13492 652 aa17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 STIM1Q13586 685 aa17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 GPIHBP1Q8IV16 184 aa17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 CCDC51Q96ER9 411 aa17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 PIGSQ96S52 555 aa17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 TCP11L1Q9NUJ3 509 aa17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 TMEM260Q9NX78 707 aa17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 LEMD3Q9Y2U8 911 aa17.62■□□□□ 0.41
ARHGEF40-203ENST00000554514 LRRC10BA6NIK2 292 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 RHOXF2BP0C7M4 288 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 KLK7P49862 253 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 RHOXF2Q9BQY4 288 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 TTF2Q9UNY4 1162 aaKnown RBP17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 TNRC6CQ9HCJ0 1690 aaKnown RBP17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 F8W031 263 aaPredicted RBP17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 PSMA7O14818 248 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 KLRC4O43908 158 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 LDHCP07864 332 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 PDE4DQ08499 809 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 SOGA3Q5TF21 947 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 CLEC10AQ8IUN9 316 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 CEP95Q96GE4 821 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 ARFGAP3Q9NP61 516 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 ZCCHC17Q9NP64 241 aaKnown RBP17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 SEC63Q9UGP8 760 aaKnown RBP17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 CDC23Q9UJX2 597 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 KIF20AO95235 890 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 TBC1D8O95759 1140 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 FCER1AP12319 257 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 ERCC3P19447 782 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 SRGAP1Q7Z6B7 1085 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 CSGALNACT2Q8N6G5 542 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 MB21D1Q8N884 522 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 RABGGTAQ92696 567 aa17.61■□□□□ 0.41
ARHGEF40-203ENST00000554514 OR52Z1P0C646 297 aa17.6■□□□□ 0.41
ARHGEF40-203ENST00000554514 TXKP42681 527 aa17.6■□□□□ 0.41
ARHGEF40-203ENST00000554514 NONOQ15233 471 aaKnown RBP eCLIP17.6■□□□□ 0.41
ARHGEF40-203ENST00000554514 MFSD14BQ5SR56 506 aa17.6■□□□□ 0.41
ARHGEF40-203ENST00000554514 ANKS1AQ92625 1134 aa17.6■□□□□ 0.41
ARHGEF40-203ENST00000554514 CD209Q9NNX6 404 aa17.6■□□□□ 0.41
ARHGEF40-203ENST00000554514 USP17L5A8MUK1 530 aa17.6■□□□□ 0.41
ARHGEF40-203ENST00000554514 TBCKQ8TEA7 893 aa17.6■□□□□ 0.41
ARHGEF40-203ENST00000554514 RRP36Q96EU6 259 aaKnown RBP17.6■□□□□ 0.41
ARHGEF40-203ENST00000554514 UIMC1Q96RL1 719 aa17.6■□□□□ 0.41
ARHGEF40-203ENST00000554514 EXOC1Q9NV70 894 aa17.6■□□□□ 0.41
ARHGEF40-203ENST00000554514 RNF216Q9NWF9 866 aaPredicted RBP17.6■□□□□ 0.41
ARHGEF40-203ENST00000554514 LUC7L2Q9Y383 392 aaKnown RBP17.6■□□□□ 0.41
ARHGEF40-203ENST00000554514 ENC1O14682 589 aa17.59■□□□□ 0.41
ARHGEF40-203ENST00000554514 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
ARHGEF40-203ENST00000554514 NAPGQ99747 312 aaPredicted RBP17.59■□□□□ 0.41
ARHGEF40-203ENST00000554514 C6orf50Q9HD87 102 aa17.59■□□□□ 0.41
ARHGEF40-203ENST00000554514 ARHGAP25P42331 645 aa17.59■□□□□ 0.41
ARHGEF40-203ENST00000554514 STK4Q13043 487 aa17.59■□□□□ 0.41
ARHGEF40-203ENST00000554514 TSR1Q2NL82 804 aaKnown RBP17.59■□□□□ 0.41
ARHGEF40-203ENST00000554514 LRRC47Q8N1G4 583 aaKnown RBP17.59■□□□□ 0.41
ARHGEF40-203ENST00000554514 COA7Q96BR5 231 aa17.59■□□□□ 0.41
ARHGEF40-203ENST00000554514 KBTBD4Q9NVX7 518 aa17.59■□□□□ 0.41
ARHGEF40-203ENST00000554514 EPN1Q9Y6I3 576 aaPredicted RBP17.59■□□□□ 0.41
ARHGEF40-203ENST00000554514 FLT1P17948 1338 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms