RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 GREB1LQ9C091 1923 aaPredicted RBP9.74□□□□□ -0.85
ACTN1-212ENST00000554158 CYP2D7A0A087X1C5 515 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 MINDY4BA8MYZ0 360 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 ZEB2O60315 1214 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 ADAMTS4O75173 837 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 ASGR1P07306 291 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 RLBP1P12271 317 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 ITGB8P26012 769 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 EPHB4P54760 987 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 IKQ13123 557 aaPredicted RBP9.74□□□□□ -0.85
ACTN1-212ENST00000554158 ACVR2BQ13705 512 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 UBE3CQ15386 1083 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 RPAP2Q8IXW5 612 aaPredicted RBP9.74□□□□□ -0.85
ACTN1-212ENST00000554158 ZNF444Q8N0Y2 327 aaPredicted RBP9.74□□□□□ -0.85
ACTN1-212ENST00000554158 STK11IPQ8N1F8 1099 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 KIFC2Q96AC6 838 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.74□□□□□ -0.858e-7■■■□□ 15.4
ACTN1-212ENST00000554158 PPP1R12CQ9BZL4 782 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 ZNF214Q9UL59 606 aaPredicted RBP9.74□□□□□ -0.85
ACTN1-212ENST00000554158 TTC28Q96AY4 2481 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 PRUNE2Q8WUY3 3088 aa9.74□□□□□ -0.85
ACTN1-212ENST00000554158 EYSQ5T1H1 3165 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 ARVCFO00192 962 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 APPP05067 770 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 ATP5JP18859 108 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 TDO2P48775 406 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 MRPS5P82675 430 aaKnown RBP9.73□□□□□ -0.85
ACTN1-212ENST00000554158 PDAP1Q13442 181 aaKnown RBP9.73□□□□□ -0.85
ACTN1-212ENST00000554158 LRRFIP1Q32MZ4 808 aaKnown RBP9.73□□□□□ -0.85
ACTN1-212ENST00000554158 CCDC144BQ3MJ40 725 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 SIAH1Q8IUQ4 282 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 CHST13Q8NET6 341 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 PANK1Q8TE04 598 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 ATXN2LQ8WWM7 1075 aaKnown RBP9.73□□□□□ -0.85
ACTN1-212ENST00000554158 GPATCH3Q96I76 525 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 HAUS7Q99871 368 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 AP5M1Q9H0R1 490 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 PRDM12Q9H4Q4 367 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 SLC28A3Q9HAS3 691 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-212ENST00000554158 FEM1BQ9UK73 627 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 DDX19BQ9UMR2 479 aa9.73□□□□□ -0.85
ACTN1-212ENST00000554158 F5H6K3 240 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 CABYRO75952 493 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 NDUFB10O96000 172 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 SLC3A2P08195 630 aaKnown RBP9.72□□□□□ -0.85
ACTN1-212ENST00000554158 FDX1P10109 184 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 CSF2RAP15509 400 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 COL9A1P20849 921 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 CST5P28325 142 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-212ENST00000554158 KLRC3Q07444 240 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 CCDC85BQ15834 202 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-212ENST00000554158 AKNAD1Q5T1N1 836 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 CTR9Q6PD62 1173 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 MAMDC4Q6UXC1 1216 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 ZNF365Q70YC5 407 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 KLHDC9Q8NEP7 349 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 NUP88Q99567 741 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-212ENST00000554158 PBX4Q9BYU1 374 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 RAVER2Q9HCJ3 691 aaKnown RBP9.72□□□□□ -0.85
ACTN1-212ENST00000554158 HOMER2Q9NSB8 354 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 NYAP2Q9P242 653 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 CLIP2Q9UDT6 1046 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 TBX21Q9UL17 535 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 COG6Q9Y2V7 657 aa9.72□□□□□ -0.85
ACTN1-212ENST00000554158 CDH23Q9H251 3354 aa9.71□□□□□ -0.85
ACTN1-212ENST00000554158 ASB14A6NK59 587 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 ZBBXA8MT70 800 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 SNAI1O95863 264 aaPredicted RBP9.71□□□□□ -0.86
ACTN1-212ENST00000554158 FGBP02675 491 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 ACRP10323 421 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 OAZ1P54368 228 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 GJA9P57773 515 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 TNFAIP2Q03169 654 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 SKIV2LQ15477 1246 aaKnown RBP9.71□□□□□ -0.86
ACTN1-212ENST00000554158 AAK1Q2M2I8 961 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 PPP4R3BQ5MIZ7 849 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 TMEM240Q5SV17 173 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 ARMCX2Q7L311 632 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 RPUSD2Q8IZ73 545 aaKnown RBP9.71□□□□□ -0.86
ACTN1-212ENST00000554158 MICALL1Q8N3F8 863 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 USP38Q8NB14 1042 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 SEZ6LQ9BYH1 1024 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 NACAP1Q9BZK3 213 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 LRRCC1Q9C099 1032 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 HIPK3Q9H422 1215 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 ACAD9Q9H845 621 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 IL23AQ9NPF7 189 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 VCANP13611 3396 aa9.71□□□□□ -0.86
ACTN1-212ENST00000554158 TRIP12Q14669 1992 aaPredicted RBP9.7□□□□□ -0.86
ACTN1-212ENST00000554158 DNAJC25-GNG10A0A024R161 153 aa9.7□□□□□ -0.86
ACTN1-212ENST00000554158 MYADML2A6NDP7 307 aa9.7□□□□□ -0.86
ACTN1-212ENST00000554158 GRXCR1A8MXD5 290 aa9.7□□□□□ -0.86
ACTN1-212ENST00000554158 ATP2A1O14983 1001 aa9.7□□□□□ -0.86
ACTN1-212ENST00000554158 TTLL1O95922 423 aa9.7□□□□□ -0.86
ACTN1-212ENST00000554158 TSPY3P0CV98 308 aa9.7□□□□□ -0.86
ACTN1-212ENST00000554158 TSPY8P0CW00 308 aa9.7□□□□□ -0.86
ACTN1-212ENST00000554158 GNAT2P19087 354 aa9.7□□□□□ -0.86
ACTN1-212ENST00000554158 CYP2C18P33260 490 aa9.7□□□□□ -0.86
ACTN1-212ENST00000554158 PBX2P40425 430 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms