RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 ZNF536O15090 1300 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 CNTNAP5Q8WYK1 1306 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 ATP2A1O14983 1001 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 ZBTB5O15062 677 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 IFNAR1P17181 557 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 ERVK-9P63128 1117 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 ERVK-24P63145 666 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 PLS1Q14651 629 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 FAM110CQ1W6H9 321 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 QRICH1Q2TAL8 776 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 CPLX2Q6PUV4 134 aaKnown RBP14.19□□□□□ -0.14
SHMT2-209ENST00000553949 HOMER1Q86YM7 354 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 CPXCR1Q8N123 301 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 PIBF1Q8WXW3 757 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 RRP36Q96EU6 259 aaKnown RBP14.19□□□□□ -0.14
SHMT2-209ENST00000553949 SPATC1LQ9H0A9 340 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 RAVER2Q9HCJ3 691 aaKnown RBP14.19□□□□□ -0.14
SHMT2-209ENST00000553949 ZNF214Q9UL59 606 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-209ENST00000553949 RLFQ13129 1914 aa14.19□□□□□ -0.14
SHMT2-209ENST00000553949 PPFIA3O75145 1194 aa14.18□□□□□ -0.14
SHMT2-209ENST00000553949 CDKL5O76039 1030 aa14.18□□□□□ -0.14
SHMT2-209ENST00000553949 ICAM1P05362 532 aa14.18□□□□□ -0.14
SHMT2-209ENST00000553949 STAT3P40763 770 aa14.18□□□□□ -0.14
SHMT2-209ENST00000553949 Q3C1V9 767 aa14.18□□□□□ -0.14
SHMT2-209ENST00000553949 CCDC83Q8IWF9 413 aa14.18□□□□□ -0.14
SHMT2-209ENST00000553949 PHKBQ93100 1093 aa14.18□□□□□ -0.14
SHMT2-209ENST00000553949 AGBL1Q96MI9 1066 aa14.18□□□□□ -0.14
SHMT2-209ENST00000553949 TEX13BQ9BXU2 312 aa14.18□□□□□ -0.14
SHMT2-209ENST00000553949 SEC63Q9UGP8 760 aaKnown RBP14.18□□□□□ -0.14
SHMT2-209ENST00000553949 V9GY48 417 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-209ENST00000553949 PNMA6FA0A0J9YX94 578 aa14.17□□□□□ -0.14
SHMT2-209ENST00000553949 hCG_1642624A0A1W2PR95 340 aa14.17□□□□□ -0.14
SHMT2-209ENST00000553949 PRPF3O43395 683 aaKnown RBP14.17□□□□□ -0.14
SHMT2-209ENST00000553949 PPP1R11O60927 126 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-209ENST00000553949 FMNL1O95466 1100 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-209ENST00000553949 CTDNEP1O95476 244 aa14.17□□□□□ -0.14
SHMT2-209ENST00000553949 CCNA1P78396 465 aa14.17□□□□□ -0.14
SHMT2-209ENST00000553949 SNRNP48Q6IEG0 339 aaKnown RBP14.17□□□□□ -0.14
SHMT2-209ENST00000553949 RIOX2Q8IUF8 465 aa14.17□□□□□ -0.14
SHMT2-209ENST00000553949 HSCBQ8IWL3 235 aa14.17□□□□□ -0.14
SHMT2-209ENST00000553949 TRIM22Q8IYM9 498 aa14.17□□□□□ -0.14
SHMT2-209ENST00000553949 SLC26A6Q9BXS9 759 aa14.17□□□□□ -0.14
SHMT2-209ENST00000553949 MOV10L1Q9BXT6 1211 aaKnown RBP14.17□□□□□ -0.14
SHMT2-209ENST00000553949 RNF26Q9BY78 433 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-209ENST00000553949 RBM27Q9P2N5 1060 aaKnown RBP14.17□□□□□ -0.14
SHMT2-209ENST00000553949 TSKSQ9UJT2 592 aa14.17□□□□□ -0.14
SHMT2-209ENST00000553949 PNMA2Q9UL42 364 aa14.17□□□□□ -0.14
SHMT2-209ENST00000553949 CCPG1Q9ULG6 757 aa14.17□□□□□ -0.14
SHMT2-209ENST00000553949 RIPK3Q9Y572 518 aa14.17□□□□□ -0.14
SHMT2-209ENST00000553949 A0A0G2JMZ2 1700 aa14.17□□□□□ -0.14
SHMT2-209ENST00000553949 PARP14Q460N5 1801 aa14.16□□□□□ -0.14
SHMT2-209ENST00000553949 K7ELQ4 463 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-209ENST00000553949 GPR25O00155 361 aa14.16□□□□□ -0.14
SHMT2-209ENST00000553949 TAL1P17542 331 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-209ENST00000553949 SLC4A3P48751 1232 aa14.16□□□□□ -0.14
SHMT2-209ENST00000553949 AKAP17AQ02040 695 aaKnown RBP14.16□□□□□ -0.14
SHMT2-209ENST00000553949 SSRP1Q08945 709 aaKnown RBP14.16□□□□□ -0.14
SHMT2-209ENST00000553949 NOM1Q5C9Z4 860 aaKnown RBP14.16□□□□□ -0.14
SHMT2-209ENST00000553949 FBXO11Q86XK2 927 aa14.16□□□□□ -0.14
SHMT2-209ENST00000553949 NSUN7Q8NE18 718 aaKnown RBP14.16□□□□□ -0.14
SHMT2-209ENST00000553949 LLPHQ9BRT6 129 aaKnown RBP14.16□□□□□ -0.14
SHMT2-209ENST00000553949 AMNQ9BXJ7 453 aa14.16□□□□□ -0.14
SHMT2-209ENST00000553949 PORCNQ9H237 461 aa14.16□□□□□ -0.14
SHMT2-209ENST00000553949 PTPDC1A2A3K4 754 aa14.15□□□□□ -0.14
SHMT2-209ENST00000553949 JAK2O60674 1132 aa14.15□□□□□ -0.14
SHMT2-209ENST00000553949 DTNBO60941 627 aa14.15□□□□□ -0.14
SHMT2-209ENST00000553949 SLC25A27O95847 323 aa14.15□□□□□ -0.14
SHMT2-209ENST00000553949 ALAS1P13196 640 aa14.15□□□□□ -0.14
SHMT2-209ENST00000553949 ERCC3P19447 782 aa14.15□□□□□ -0.14
SHMT2-209ENST00000553949 COPB2P35606 906 aa14.15□□□□□ -0.14
SHMT2-209ENST00000553949 SP3Q02447 781 aa14.15□□□□□ -0.14
SHMT2-209ENST00000553949 PFKFB3Q16875 520 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-209ENST00000553949 TKFCQ3LXA3 575 aa14.15□□□□□ -0.14
SHMT2-209ENST00000553949 USH1GQ495M9 461 aa14.15□□□□□ -0.14
SHMT2-209ENST00000553949 NCAPG2Q86XI2 1143 aa14.15□□□□□ -0.14
SHMT2-209ENST00000553949 SHCBP1Q8NEM2 672 aa14.15□□□□□ -0.14
SHMT2-209ENST00000553949 PCDHA1Q9Y5I3 950 aa14.15□□□□□ -0.14
SHMT2-209ENST00000553949 STK36Q9NRP7 1315 aa14.15□□□□□ -0.15
SHMT2-209ENST00000553949 DEXIO95424 95 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 SCG2P13521 617 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 LACTBP83111 547 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-209ENST00000553949 TRAF1Q13077 416 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 CUL4AQ13619 759 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 PKN1Q16512 942 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 HEATR3Q7Z4Q2 680 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 CCAR1Q8IX12 1150 aaKnown RBP14.14□□□□□ -0.15
SHMT2-209ENST00000553949 SMARCC2Q8TAQ2 1214 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 DDX11Q96FC9 970 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 TRERF1Q96PN7 1200 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 MROH8Q9H579 483 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 EFCC1Q9HA90 598 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 HOMER2Q9NSB8 354 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 RNF146Q9NTX7 359 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 ORC3Q9UBD5 711 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-209ENST00000553949 ABCB11O95342 1321 aa14.14□□□□□ -0.15
SHMT2-209ENST00000553949 FKTNO75072 461 aa14.13□□□□□ -0.15
SHMT2-209ENST00000553949 HSPA1AP0DMV8 641 aaKnown RBP14.13□□□□□ -0.15
SHMT2-209ENST00000553949 HSPA1BP0DMV9 641 aaKnown RBP14.13□□□□□ -0.15
SHMT2-209ENST00000553949 FDPSP14324 419 aaKnown RBP14.13□□□□□ -0.15
SHMT2-209ENST00000553949 MAPK4P31152 587 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms