RNA–Protein interactions for RNA: ENST00000553857.5

UBR7-203, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-203ENST00000553857 KNDC1Q76NI1 1749 aa6.78□□□□□ -1.32
UBR7-203ENST00000553857 CPS1P31327 1500 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 PRPF40AO75400 957 aaKnown RBP6.77□□□□□ -1.33
UBR7-203ENST00000553857 KIAA2012Q0VF49 1180 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 OS9Q13438 667 aaPredicted RBP6.77□□□□□ -1.33
UBR7-203ENST00000553857 PLCL1Q15111 1095 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 CAVIN1Q6NZI2 390 aaKnown RBP6.77□□□□□ -1.33
UBR7-203ENST00000553857 MCM10Q7L590 875 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 TMC7Q7Z402 723 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 KCNB2Q92953 911 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 KIF1BPQ96EK5 621 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 ASIC4Q96FT7 647 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 ZSCAN31Q96LW9 406 aaPredicted RBP6.77□□□□□ -1.33
UBR7-203ENST00000553857 KIF2CQ99661 725 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 RBCK1Q9BYM8 510 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 BCO2Q9BYV7 579 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 ATXN3LQ9H3M9 355 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 PIDD1Q9HB75 910 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 STAP2Q9UGK3 403 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 PLAGL2Q9UPG8 496 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 TBX22Q9Y458 520 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 MYO5BQ9ULV0 1848 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 METP08581 1390 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 MSH6P52701 1360 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 USP31Q70CQ4 1352 aa6.77□□□□□ -1.33
UBR7-203ENST00000553857 USP6P35125 1406 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 FAM83GA6ND36 823 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 GOLGA6L6A8MZA4 724 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 RBAK-RBAKDNI3L0D1 243 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 RNGTTO60942 597 aaKnown RBP6.76□□□□□ -1.33
UBR7-203ENST00000553857 C8AP07357 584 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 SLFN14P0C7P3 912 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 GSPT1P15170 499 aaKnown RBP6.76□□□□□ -1.33
UBR7-203ENST00000553857 ZKSCAN1P17029 563 aaPredicted RBP6.76□□□□□ -1.33
UBR7-203ENST00000553857 JUNBP17275 347 aaPredicted RBP6.76□□□□□ -1.33
UBR7-203ENST00000553857 JAG1P78504 1218 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 DCTN1Q14203 1278 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 ZSCAN23Q3MJ62 389 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 CYP27C1Q4G0S4 372 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 NXPE4Q6UWF7 544 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 UBE3DQ7Z6J8 389 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 AEBP1Q8IUX7 1158 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 POU5F2Q8N7G0 328 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 ISL2Q96A47 359 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 MEIS3Q99687 375 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 DUSP23Q9BVJ7 150 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 TSPY26PQ9H489 355 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 KRT82Q9NSB4 513 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 MON2Q7Z3U7 1717 aa6.76□□□□□ -1.33
UBR7-203ENST00000553857 NRKQ7Z2Y5 1582 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 SOWAHDA6NJG2 315 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 GLRX3O76003 335 aaKnown RBP6.75□□□□□ -1.33
UBR7-203ENST00000553857 DDX58O95786 925 aaKnown RBP6.75□□□□□ -1.33
UBR7-203ENST00000553857 RNASE1P07998 156 aaKnown RBP6.75□□□□□ -1.33
UBR7-203ENST00000553857 PDCP20941 246 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 PSMA5P28066 241 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 ANKRD1Q15327 319 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 LRSAM1Q6UWE0 723 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 SULF2Q8IWU5 870 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 CLASRPQ8N2M8 674 aaKnown RBP6.75□□□□□ -1.33
UBR7-203ENST00000553857 KCNH5Q8NCM2 988 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 NETO1Q8TDF5 533 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 TMX3Q96JJ7 454 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 DMRTB1Q96MA1 342 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 PANK2Q9BZ23 570 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 RRAGDQ9NQL2 400 aaPredicted RBP6.75□□□□□ -1.33
UBR7-203ENST00000553857 DIAPH3Q9NSV4 1193 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 MBNL3Q9NUK0 354 aaKnown RBP6.75□□□□□ -1.33
UBR7-203ENST00000553857 TMEM39AQ9NV64 488 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 ANKARQ7Z5J8 1434 aa6.75□□□□□ -1.33
UBR7-203ENST00000553857 PXDNLA1KZ92 1463 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 MAP3K5Q99683 1374 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 SURF6O75683 361 aaKnown RBP6.74□□□□□ -1.33
UBR7-203ENST00000553857 CHMLP26374 656 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 KCNJ4P48050 445 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 OXCT1P55809 520 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 TEFQ10587 303 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 CHAF1AQ13111 956 aaPredicted RBP6.74□□□□□ -1.33
UBR7-203ENST00000553857 CUL4AQ13619 759 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 MTHFSDQ2M296 383 aaKnown RBP6.74□□□□□ -1.33
UBR7-203ENST00000553857 AMOTQ4VCS5 1084 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 PLEKHO1Q53GL0 409 aaPredicted RBP6.74□□□□□ -1.33
UBR7-203ENST00000553857 HSP90AB2PQ58FF8 381 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 ZC3H12AQ5D1E8 599 aaKnown RBP6.74□□□□□ -1.33
UBR7-203ENST00000553857 C1orf141Q5JVX7 400 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 MAP1SQ66K74 1059 aaPredicted RBP6.74□□□□□ -1.33
UBR7-203ENST00000553857 C16orf71Q8IYS4 520 aaPredicted RBP6.74□□□□□ -1.33
UBR7-203ENST00000553857 GRIN3AQ8TCU5 1115 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 GPBAR1Q8TDU6 330 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 SETDB2Q96T68 719 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 LMBRD1Q9NUN5 540 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 LIMCH1Q9UPQ0 1083 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 SMC3Q9UQE7 1217 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 AKAP12Q02952 1782 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 OVOS2A0A0J9YW53 1432 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 CRB1P82279 1406 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 OVOS2Q6IE36 1432 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 MAP3K19Q56UN5 1328 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 TTC41PQ6P2S7 1318 aa6.74□□□□□ -1.33
UBR7-203ENST00000553857 IGSF1Q8N6C5 1336 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms