RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 DAGLBQ8NCG7 672 aa5.36□□□□□ -1.55
LINC00648-201ENST00000553747 ZNF512BQ96KM6 892 aaPredicted RBP5.36□□□□□ -1.55
LINC00648-201ENST00000553747 SPATA32Q96LK8 384 aa5.36□□□□□ -1.55
LINC00648-201ENST00000553747 SLC9A7Q96T83 725 aa5.36□□□□□ -1.55
LINC00648-201ENST00000553747 ZMYM5Q9UJ78 669 aa5.36□□□□□ -1.55
LINC00648-201ENST00000553747 ZC3H12DA2A288 527 aaKnown RBP5.35□□□□□ -1.55
LINC00648-201ENST00000553747 FAM86C2PA6NEL3 165 aa5.35□□□□□ -1.55
LINC00648-201ENST00000553747 COL9A2Q14055 689 aaPredicted RBP5.35□□□□□ -1.55
LINC00648-201ENST00000553747 KIR3DS1Q14943 382 aa5.35□□□□□ -1.55
LINC00648-201ENST00000553747 SLC14A2Q15849 920 aa5.35□□□□□ -1.55
LINC00648-201ENST00000553747 RNF111Q6ZNA4 994 aa5.35□□□□□ -1.55
LINC00648-201ENST00000553747 TMC3Q7Z5M5 1100 aa5.35□□□□□ -1.55
LINC00648-201ENST00000553747 TMEM192Q8IY95 271 aa5.35□□□□□ -1.55
LINC00648-201ENST00000553747 ZNF655Q8N720 491 aaPredicted RBP5.35□□□□□ -1.55
LINC00648-201ENST00000553747 MZB1Q8WU39 189 aa5.35□□□□□ -1.55
LINC00648-201ENST00000553747 PWWP2AQ96N64 755 aa5.35□□□□□ -1.55
LINC00648-201ENST00000553747 CRBNQ96SW2 442 aa5.35□□□□□ -1.55
LINC00648-201ENST00000553747 TM9SF2Q99805 663 aa5.35□□□□□ -1.55
LINC00648-201ENST00000553747 HDAC8Q9BY41 377 aa5.35□□□□□ -1.55
LINC00648-201ENST00000553747 FBXL21Q9UKT6 434 aa5.35□□□□□ -1.55
LINC00648-201ENST00000553747 PPT2Q9UMR5 302 aa5.35□□□□□ -1.55
LINC00648-201ENST00000553747 E9PSI1 815 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 NCKAP1LP55160 1127 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 PCBP3P57721 371 aaKnown RBP5.34□□□□□ -1.55
LINC00648-201ENST00000553747 PAK2Q13177 524 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 SNW1Q13573 536 aaKnown RBP5.34□□□□□ -1.55
LINC00648-201ENST00000553747 C9orf131Q5VYM1 1079 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 HHIPL2Q6UWX4 724 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 ZPBP2Q6X784 338 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 CEP128Q6ZU80 1094 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 WAPLQ7Z5K2 1190 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 METTL16Q86W50 562 aaKnown RBP5.34□□□□□ -1.55
LINC00648-201ENST00000553747 NT5DC4Q86YG4 428 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 IGDCC3Q8IVU1 814 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 TCTN2Q96GX1 697 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 GPR20Q99678 358 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 PLCD4Q9BRC7 762 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 PRDM14Q9GZV8 571 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 LUC7LQ9NQ29 371 aaKnown RBP5.34□□□□□ -1.55
LINC00648-201ENST00000553747 KIAA1522Q9P206 1035 aaPredicted RBP5.34□□□□□ -1.55
LINC00648-201ENST00000553747 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.34□□□□□ -1.55
LINC00648-201ENST00000553747 ZNF281Q9Y2X9 895 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 PCDHB12Q9Y5F1 795 aa5.34□□□□□ -1.55
LINC00648-201ENST00000553747 SIGLEC6O43699 453 aa5.33□□□□□ -1.56
LINC00648-201ENST00000553747 NRDCO43847 1150 aa5.33□□□□□ -1.56
LINC00648-201ENST00000553747 PRAMEF1O95521 474 aa5.33□□□□□ -1.56
LINC00648-201ENST00000553747 HDLBPQ00341 1268 aaKnown RBP5.33□□□□□ -1.56
LINC00648-201ENST00000553747 FRMD5Q7Z6J6 570 aa5.33□□□□□ -1.56
LINC00648-201ENST00000553747 CCDC144CPQ8IYA2 1237 aa5.33□□□□□ -1.56
LINC00648-201ENST00000553747 TAB3Q8N5C8 712 aaPredicted RBP5.33□□□□□ -1.56
LINC00648-201ENST00000553747 USHBP1Q8N6Y0 703 aa5.33□□□□□ -1.56
LINC00648-201ENST00000553747 LINC01356Q8N9X3 169 aa5.33□□□□□ -1.56
LINC00648-201ENST00000553747 GPRASP2Q96D09 838 aa5.33□□□□□ -1.56
LINC00648-201ENST00000553747 FOXP3Q9BZS1 431 aa5.33□□□□□ -1.56
LINC00648-201ENST00000553747 CHST7Q9NS84 486 aa5.33□□□□□ -1.56
LINC00648-201ENST00000553747 SUCOQ9UBS9 1254 aaKnown RBP5.33□□□□□ -1.56
LINC00648-201ENST00000553747 TCFL5Q9UL49 500 aa5.33□□□□□ -1.56
LINC00648-201ENST00000553747 HRKO00198 91 aa5.32□□□□□ -1.56
LINC00648-201ENST00000553747 AKAP8O43823 692 aaKnown RBP5.32□□□□□ -1.56
LINC00648-201ENST00000553747 SYPP08247 313 aa5.32□□□□□ -1.56
LINC00648-201ENST00000553747 ACRP10323 421 aa5.32□□□□□ -1.56
LINC00648-201ENST00000553747 GUCY2CP25092 1073 aa5.32□□□□□ -1.56
LINC00648-201ENST00000553747 YBX1P67809 324 aaKnown RBP5.32□□□□□ -1.56
LINC00648-201ENST00000553747 AUHQ13825 339 aaKnown RBP5.32□□□□□ -1.56
LINC00648-201ENST00000553747 LDHDQ86WU2 507 aa5.32□□□□□ -1.56
LINC00648-201ENST00000553747 RBBP8NLQ8NC74 664 aaPredicted RBP5.32□□□□□ -1.56
LINC00648-201ENST00000553747 LINC00116Q8NCU8 138 aa5.32□□□□□ -1.56
LINC00648-201ENST00000553747 CRTAC1Q9NQ79 661 aa5.32□□□□□ -1.56
LINC00648-201ENST00000553747 GINM1Q9NU53 330 aa5.32□□□□□ -1.56
LINC00648-201ENST00000553747 GFOD1Q9NXC2 390 aa5.32□□□□□ -1.56
LINC00648-201ENST00000553747 EFR3BQ9Y2G0 817 aa5.32□□□□□ -1.56
LINC00648-201ENST00000553747 MEIS1O00470 390 aa5.31□□□□□ -1.56
LINC00648-201ENST00000553747 FKTNO75072 461 aa5.31□□□□□ -1.56
LINC00648-201ENST00000553747 PMS1P54277 932 aaKnown RBP5.31□□□□□ -1.56
LINC00648-201ENST00000553747 CCDC81Q6ZN84 652 aa5.31□□□□□ -1.56
LINC00648-201ENST00000553747 TMC6Q7Z403 805 aa5.31□□□□□ -1.56
LINC00648-201ENST00000553747 C7orf61Q8IZ16 206 aa5.31□□□□□ -1.56
LINC00648-201ENST00000553747 SMARCC1Q92922 1105 aaPredicted RBP5.31□□□□□ -1.56
LINC00648-201ENST00000553747 MAP6Q96JE9 813 aa5.31□□□□□ -1.56
LINC00648-201ENST00000553747 HHIPL1Q96JK4 782 aa5.31□□□□□ -1.56
LINC00648-201ENST00000553747 KLHL14Q9P2G3 628 aa5.31□□□□□ -1.56
LINC00648-201ENST00000553747 FFAR3O14843 346 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 SUV39H1O43463 412 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 PNLIPP16233 465 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 SOX9P48436 509 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 EIF6P56537 245 aaKnown RBP5.3□□□□□ -1.56
LINC00648-201ENST00000553747 BBS9Q3SYG4 887 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 NOL9Q5SY16 702 aaKnown RBP5.3□□□□□ -1.56
LINC00648-201ENST00000553747 UNC5AQ6ZN44 842 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 RUFY4Q6ZNE9 571 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 FERMT3Q86UX7 667 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 LSRQ86X29 649 aaPredicted RBP5.3□□□□□ -1.56
LINC00648-201ENST00000553747 ADGRG2Q8IZP9 1017 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 RASGRP4Q8TDF6 673 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 DSCC1Q9BVC3 393 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 CCSER2Q9H7U1 834 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 PRR13Q9NZ81 148 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 MINPP1Q9UNW1 487 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 MYRFQ9Y2G1 1151 aa5.3□□□□□ -1.56
LINC00648-201ENST00000553747 TMEM82A0PJX8 343 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms