RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 LGALS16A8MUM7 142 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 STXBP3O00186 592 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 ENC1O14682 589 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 N4BP1O75113 896 aaKnown RBP7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 NDUFA10O95299 355 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 SPAG1Q07617 926 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 C12orf60Q5U649 245 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 DZIP1Q86YF9 867 aaKnown RBP7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 MB21D1Q8N884 522 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 CEP112Q8N8E3 955 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 ZNF507Q8TCN5 953 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 CDCA7Q9BWT1 371 aaPredicted RBP7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 ABCB6Q9NP58 842 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 RMND1Q9NWS8 449 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 BTAF1O14981 1849 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 CCDC194A0A1B0GVG4 234 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 KDM4FA0A1W2PPD8 638 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 RCCD1A6NED2 376 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 B4DLN1 442 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 PES1O00541 588 aaKnown RBP7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 CALML3P27482 149 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 KIF5BP33176 963 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 USP5P45974 858 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 BRD3Q15059 726 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 SLC10A5Q5PT55 438 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 TTI2Q6NXR4 508 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 RASSF8Q8NHQ8 419 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 HPS3Q969F9 1004 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 TRIM47Q96LD4 638 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 DUSP9Q99956 384 aaKnown RBP7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 PDE11AQ9HCR9 933 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 GUCA1BQ9UMX6 200 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 NHSQ6T4R5 1651 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 ATP1A1P05023 1023 aaKnown RBP7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 PLCG1P19174 1290 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 HNRNPH2P55795 449 aaKnown RBP7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 TRIM14Q14142 442 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 MCM6Q14566 821 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 DTHD1Q6ZMT9 781 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 DNAJC7Q99615 494 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 TTYH3Q9C0H2 523 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 KBTBD4Q9NVX7 518 aa7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 SAP30BPQ9UHR5 308 aaKnown RBP7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 THRAP3Q9Y2W1 955 aaKnown RBP7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 EPN1Q9Y6I3 576 aaPredicted RBP7.79□□□□□ -1.16
LINC-ROR-201ENST00000553704 CCDC66A2RUB6 948 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 SRGAP2O75044 1071 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 FCER1AP12319 257 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 TM4SF1P30408 202 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 FAM193AP78312 1265 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 JAKMIP3Q5VZ66 844 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 NBPF5PQ86XG9 351 aaPredicted RBP7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 DGKHQ86XP1 1220 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 GPIHBP1Q8IV16 184 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 GIMAP8Q8ND71 665 aaPredicted RBP7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 ANKRD20A12PQ8NF67 263 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 TMEM47Q9BQJ4 181 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 PYM1Q9BRP8 204 aaKnown RBP7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 SH3GLB2Q9NR46 395 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 AGPAT5Q9NUQ2 364 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 BARHL2Q9NY43 387 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 CNTNAP4Q9C0A0 1308 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 CTAGE15A4D2H0 777 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 NUTM2BA6NNL0 878 aaPredicted RBP7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 NUTM2EB1AL46 878 aaPredicted RBP7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 H7C1D1 291 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 RHOBTB3O94955 611 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 CTAGE8P0CG41 777 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 RASA1P20936 1047 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 KCNB1Q14721 858 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 TXNRD1Q16881 649 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 WHAMMP3Q1A5X7 153 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 CCDC178Q5BJE1 867 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 TRAPPC11Q7Z392 1133 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 CTAGE6Q86UF2 777 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 MAPKAPK5Q8IW41 473 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 CTAGE4Q8IX94 777 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 DAGLBQ8NCG7 672 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 TGFBRAP1Q8WUH2 860 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 HNRNPLLQ8WVV9 542 aaKnown RBP7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 SMARCC1Q92922 1105 aaPredicted RBP7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 NLRP3Q96P20 1036 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 TRERF1Q96PN7 1200 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 LACRTQ9GZZ8 138 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 MYO6Q9UM54 1294 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 L1RE1Q9UN81 338 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 STX8Q9UNK0 236 aa7.78□□□□□ -1.16
LINC-ROR-201ENST00000553704 PALM3A6NDB9 673 aaPredicted RBP7.77□□□□□ -1.17
LINC-ROR-201ENST00000553704 TSPY3P0CV98 308 aa7.77□□□□□ -1.17
LINC-ROR-201ENST00000553704 TSPY8P0CW00 308 aa7.77□□□□□ -1.17
LINC-ROR-201ENST00000553704 EEF1GP26641 437 aaKnown RBP7.77□□□□□ -1.17
LINC-ROR-201ENST00000553704 UBA7P41226 1012 aa7.77□□□□□ -1.17
LINC-ROR-201ENST00000553704 STK4Q13043 487 aa7.77□□□□□ -1.17
LINC-ROR-201ENST00000553704 NFIXQ14938 502 aa7.77□□□□□ -1.17
LINC-ROR-201ENST00000553704 OR8K1Q8NGG5 319 aa7.77□□□□□ -1.17
LINC-ROR-201ENST00000553704 ANKS1AQ92625 1134 aa7.77□□□□□ -1.17
LINC-ROR-201ENST00000553704 CNOT6LQ96LI5 555 aaKnown RBP7.77□□□□□ -1.17
LINC-ROR-201ENST00000553704 MMS19Q96T76 1030 aa7.77□□□□□ -1.17
LINC-ROR-201ENST00000553704 CCSER1Q9C0I3 900 aa7.77□□□□□ -1.17
LINC-ROR-201ENST00000553704 THAP9Q9H5L6 903 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms