RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 RABGAP1Q9Y3P9 1069 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 IVNS1ABPQ9Y6Y0 642 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 WDR87Q6ZQQ6 2873 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.63□□□□□ -1.35
HOXB3-213ENST00000552000 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.63□□□□□ -1.35
HOXB3-213ENST00000552000 XIRP2A4UGR9 3374 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 FAM186AA6NE01 2351 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 IGHA1P01876 353 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 LDHCP07864 332 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 CYBAP13498 195 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 SNX17Q15036 470 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 CCDC85BQ15834 202 aaPredicted RBP6.63□□□□□ -1.35
HOXB3-213ENST00000552000 USP17L2Q6R6M4 530 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 TBC1D9Q6ZT07 1266 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 SVOPQ8N4V2 548 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 IL27Q8NEV9 243 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 ATXN2LQ8WWM7 1075 aaKnown RBP6.63□□□□□ -1.35
HOXB3-213ENST00000552000 TIFAQ96CG3 184 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 ASB2Q96Q27 587 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 GAS2L1Q99501 681 aaPredicted RBP6.63□□□□□ -1.35
HOXB3-213ENST00000552000 RAI14Q9P0K7 980 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 PI4KBQ9UBF8 816 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 ZBTB21Q9ULJ3 1066 aa6.63□□□□□ -1.35
HOXB3-213ENST00000552000 PA2G4Q9UQ80 394 aaKnown RBP6.63□□□□□ -1.35
HOXB3-213ENST00000552000 DNMT3AQ9Y6K1 912 aaPredicted RBP6.63□□□□□ -1.35
HOXB3-213ENST00000552000 ZFHX2Q9C0A1 2572 aaPredicted RBP6.63□□□□□ -1.35
HOXB3-213ENST00000552000 MYH1P12882 1939 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 MYO5AQ9Y4I1 1855 aaKnown RBP6.62□□□□□ -1.35
HOXB3-213ENST00000552000 PDS5AQ29RF7 1337 aaKnown RBP6.62□□□□□ -1.35
HOXB3-213ENST00000552000 USP17L15C9J2P7 530 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 USP17L13C9JLJ4 530 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 USP17L11C9JVI0 530 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 USP17L18D6R9N7 530 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 USP17L22D6RA61 530 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 USP17L17D6RBQ6 530 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 USP17L19D6RCP7 530 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 USP17L20D6RJB6 530 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 CIAO1O76071 339 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 MAP4K4O95819 1239 aaPredicted RBP6.62□□□□□ -1.35
HOXB3-213ENST00000552000 CLTBP09497 229 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 HOXC6P09630 235 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 RAG1P15918 1043 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 IL15P40933 162 aaPredicted RBP6.62□□□□□ -1.35
HOXB3-213ENST00000552000 TIMM10P62072 90 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 GSTO1P78417 241 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 MRPS5P82675 430 aaKnown RBP6.62□□□□□ -1.35
HOXB3-213ENST00000552000 FPGSQ05932 587 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 USP17L24Q0WX57 530 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 GRB14Q14449 540 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 LRRC41Q15345 812 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 ZYXQ15942 572 aaKnown RBP6.62□□□□□ -1.35
HOXB3-213ENST00000552000 FAM47AQ5JRC9 791 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 PRAMEF19Q5SWL8 479 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 AKNAD1Q5T1N1 836 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 PI16Q6UXB8 463 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 DPP9Q86TI2 863 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 MAPKAPK5Q8IW41 473 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 CRACR2BQ8N4Y2 399 aaPredicted RBP6.62□□□□□ -1.35
HOXB3-213ENST00000552000 KRI1Q8N9T8 703 aaKnown RBP6.62□□□□□ -1.35
HOXB3-213ENST00000552000 SH3RF3Q8TEJ3 882 aaPredicted RBP6.62□□□□□ -1.35
HOXB3-213ENST00000552000 NSUN4Q96CB9 384 aaKnown RBP6.62□□□□□ -1.35
HOXB3-213ENST00000552000 NECAB3Q96P71 396 aaPredicted RBP6.62□□□□□ -1.35
HOXB3-213ENST00000552000 FEZ1Q99689 392 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 TRIM34Q9BYJ4 488 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 PRDM12Q9H4Q4 367 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 DNAJC18Q9H819 358 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 ZFAND3Q9H8U3 227 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 BTBD7Q9P203 1132 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 TACC3Q9Y6A5 838 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 MCM3APO60318 1980 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 GBF1Q92538 1859 aa6.62□□□□□ -1.35
HOXB3-213ENST00000552000 WDFY4Q6ZS81 3184 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 GRXCR1A8MXD5 290 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 KIAA0355O15063 1070 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 SEPT4O43236 478 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 PQBP1O60828 265 aaKnown RBP6.61□□□□□ -1.35
HOXB3-213ENST00000552000 IGHA2P01877 340 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 IGFBP4P22692 258 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 ADORA2AP29274 412 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 CLCN1P35523 988 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 ADGRE1Q14246 886 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 CCDC129Q6ZRS4 1044 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 LINC00528Q8N1L1 170 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 ITPKCQ96DU7 683 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 XAGE2Q96GT9 111 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 NOL10Q9BSC4 688 aaKnown RBP6.61□□□□□ -1.35
HOXB3-213ENST00000552000 C1QTNF1Q9BXJ1 281 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 KLF16Q9BXK1 252 aaPredicted RBP6.61□□□□□ -1.35
HOXB3-213ENST00000552000 DHX36Q9H2U1 1008 aaKnown RBP6.61□□□□□ -1.35
HOXB3-213ENST00000552000 GPCPD1Q9NPB8 672 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 GINM1Q9NU53 330 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 TMEM39AQ9NV64 488 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 HMG20BQ9P0W2 317 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 PALD1Q9ULE6 856 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 CACNA1BQ00975 2339 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 ZNF318Q5VUA4 2279 aa6.61□□□□□ -1.35
HOXB3-213ENST00000552000 FOCADQ5VW36 1801 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 SYNGAP1Q96PV0 1343 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 A0A1B0GUL7 405 aa6.6□□□□□ -1.35
HOXB3-213ENST00000552000 GH2P01242 217 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms